BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026693
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containi...    76   2e-12
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ...    73   3e-11
ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10

>ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 516

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
 Frame = +2

Query: 2   AWKYYEEMKEKGFLPEPKTEEMLQAFASARQTAGTLDFN---NQMGLDSSKKNPKVVLNT 172
           A  YY EM+EKGFLPEPKTEEMLQA+ S +Q     + N   NQ+  D+ KK  K + + 
Sbjct: 430 AHTYYAEMQEKGFLPEPKTEEMLQAWVSGKQATEGQETNLEPNQLENDTLKKKVKAIPSK 489

Query: 173 SSYEKDFLKLPETRKVTRGR 232
              EK FL+ PETR+VTR R
Sbjct: 490 FDREKAFLREPETRRVTRER 509


>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499595|gb|AES80798.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = +2

Query: 2   AWKYYEEMKEKGFLPEPKTEEMLQAFASARQ---TAGTLDFNNQMGLDSSKKNPKVVLNT 172
           A+KYY EM+EKGFLPEPKTE MLQA+ S RQ   +  T   +NQ+     KK+ K + + 
Sbjct: 499 AYKYYIEMQEKGFLPEPKTESMLQAWLSGRQVTDSQATDLEHNQLEHGGLKKSVKPIQSK 558

Query: 173 SSYEKDFLKLPETRKVTR 226
              EKDFL+ PETR V+R
Sbjct: 559 FDREKDFLREPETRSVSR 576


>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Vitis vinifera]
          Length = 566

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
 Frame = +2

Query: 2   AWKYYEEMKEKGFLPEPKTEEMLQAFASARQTAGT--LDF-NNQMGLDSSKKNPKVVLNT 172
           A+KYY EMKEK FLPEPKTE+MLQA+ S ++TA    +D  +NQ     S K   V    
Sbjct: 481 AYKYYIEMKEKQFLPEPKTEDMLQAWISGKETADVRMIDLKDNQSDHGQSSKKTLVTSKN 540

Query: 173 SSYEKDFLKLPETRKVTRGR 232
               +DF + PETRKVTR R
Sbjct: 541 VDLGRDFRQQPETRKVTRER 560


>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
 Frame = +2

Query: 2   AWKYYEEMKEKGFLPEPKTEEMLQAFASARQTAGTLDFN---NQMGLDSSKKNPKVVLNT 172
           A +YY EM+EKGFLPEPKTEEMLQA+ S +Q     + +   +Q+  D+ KK  K + + 
Sbjct: 526 AQRYYAEMQEKGFLPEPKTEEMLQAWVSGKQATEGQEKDLEPSQLENDTLKKKVKGIPSK 585

Query: 173 SSYEKDFLKLPETRKVTRGR 232
              +K FL+ PETR+VTR R
Sbjct: 586 FDRKKAFLREPETRRVTRER 605