BLASTX nr result
ID: Coptis24_contig00026693
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026693 (472 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containi... 76 2e-12 ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ... 73 3e-11 ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10 ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi... 70 1e-10 >ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Glycine max] Length = 516 Score = 76.3 bits (186), Expect = 2e-12 Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 3/80 (3%) Frame = +2 Query: 2 AWKYYEEMKEKGFLPEPKTEEMLQAFASARQTAGTLDFN---NQMGLDSSKKNPKVVLNT 172 A YY EM+EKGFLPEPKTEEMLQA+ S +Q + N NQ+ D+ KK K + + Sbjct: 430 AHTYYAEMQEKGFLPEPKTEEMLQAWVSGKQATEGQETNLEPNQLENDTLKKKVKAIPSK 489 Query: 173 SSYEKDFLKLPETRKVTRGR 232 EK FL+ PETR+VTR R Sbjct: 490 FDREKAFLREPETRRVTRER 509 >ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 585 Score = 72.8 bits (177), Expect = 3e-11 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 3/78 (3%) Frame = +2 Query: 2 AWKYYEEMKEKGFLPEPKTEEMLQAFASARQ---TAGTLDFNNQMGLDSSKKNPKVVLNT 172 A+KYY EM+EKGFLPEPKTE MLQA+ S RQ + T +NQ+ KK+ K + + Sbjct: 499 AYKYYIEMQEKGFLPEPKTESMLQAWLSGRQVTDSQATDLEHNQLEHGGLKKSVKPIQSK 558 Query: 173 SSYEKDFLKLPETRKVTR 226 EKDFL+ PETR V+R Sbjct: 559 FDREKDFLREPETRSVSR 576 >ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Vitis vinifera] Length = 566 Score = 70.9 bits (172), Expect = 1e-10 Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 3/80 (3%) Frame = +2 Query: 2 AWKYYEEMKEKGFLPEPKTEEMLQAFASARQTAGT--LDF-NNQMGLDSSKKNPKVVLNT 172 A+KYY EMKEK FLPEPKTE+MLQA+ S ++TA +D +NQ S K V Sbjct: 481 AYKYYIEMKEKQFLPEPKTEDMLQAWISGKETADVRMIDLKDNQSDHGQSSKKTLVTSKN 540 Query: 173 SSYEKDFLKLPETRKVTRGR 232 +DF + PETRKVTR R Sbjct: 541 VDLGRDFRQQPETRKVTRER 560 >ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010, mitochondrial-like [Glycine max] Length = 612 Score = 70.5 bits (171), Expect = 1e-10 Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 3/80 (3%) Frame = +2 Query: 2 AWKYYEEMKEKGFLPEPKTEEMLQAFASARQTAGTLDFN---NQMGLDSSKKNPKVVLNT 172 A +YY EM+EKGFLPEPKTEEMLQA+ S +Q + + +Q+ D+ KK K + + Sbjct: 526 AQRYYAEMQEKGFLPEPKTEEMLQAWVSGKQATEGQEKDLEPSQLENDTLKKKVKGIPSK 585 Query: 173 SSYEKDFLKLPETRKVTRGR 232 +K FL+ PETR+VTR R Sbjct: 586 FDRKKAFLREPETRRVTRER 605