BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026678
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   491   e-136
ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...   490   e-136
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   481   e-134
ref|XP_002300832.1| f-box family protein [Populus trichocarpa] g...   480   e-133
ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   479   e-133

>ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Vitis
           vinifera] gi|359479635|ref|XP_003632310.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 2 [Vitis
           vinifera] gi|359479637|ref|XP_003632311.1| PREDICTED:
           F-box/kelch-repeat protein SKIP30-like isoform 3 [Vitis
           vinifera]
          Length = 345

 Score =  491 bits (1264), Expect = e-136
 Identities = 233/315 (73%), Positives = 273/315 (86%)
 Frame = +3

Query: 3   LPDAVALQCLARVPFYAYPKLQLVCHSWREAIRSPELFRTRQELGASEELLCVSAFEPEN 182
           LPDAVAL+CLA VPFY +P+L+LV  SWR+AIR PELF+ RQE+G+SE+LLCV AF+PEN
Sbjct: 8   LPDAVALRCLAWVPFYLHPRLELVSRSWRDAIRGPELFKARQEVGSSEDLLCVCAFDPEN 67

Query: 183 SWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGDNDGIFAT 362
            WQLY+P KDLW++LPVLPS+IR LAHFG VS AGKLFVLGGGSDAVDPLTGD DG FAT
Sbjct: 68  LWQLYDPRKDLWISLPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGDQDGSFAT 127

Query: 363 DEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEIYDPEKDV 542
           +EVWSYDP++R WA RA MLVPRAMFACCVLDGKI+VAGGFT+ RKSIS+AEIYDPEKD 
Sbjct: 128 NEVWSYDPIIRQWAPRAPMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEIYDPEKDA 187

Query: 543 WIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQGPMAVVQ 722
           W+++ DL  THNSAC+GVV+ GKVHVLHKGL+TVQ+LD     W +EDYGWLQGPMA+VQ
Sbjct: 188 WVSIPDLHRTHNSACSGVVLDGKVHVLHKGLTTVQILDKVGPGWRVEDYGWLQGPMAIVQ 247

Query: 723 GELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIGPGRWNVD 902
           G LYV+SHG+IFKQ++E   +KMV +AS+F+ RIGFAM GL  E+Y+IGGVIGP RWN D
Sbjct: 248 GALYVMSHGIIFKQERE--VKKMVVSASEFRRRIGFAMTGLRDEIYVIGGVIGPDRWNWD 305

Query: 903 IKPLFDVDVLTVRSE 947
           IKPL DVDVLT+ SE
Sbjct: 306 IKPLSDVDVLTIGSE 320


>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis]
           gi|223535945|gb|EEF37604.1| Protein AFR, putative
           [Ricinus communis]
          Length = 345

 Score =  490 bits (1262), Expect = e-136
 Identities = 232/315 (73%), Positives = 272/315 (86%)
 Frame = +3

Query: 3   LPDAVALQCLARVPFYAYPKLQLVCHSWREAIRSPELFRTRQELGASEELLCVSAFEPEN 182
           LPDA+A++C+ARVPFY +PKL+LV HSWR AIRSPELF+ RQE+G++E+LLCV AFEPEN
Sbjct: 8   LPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCVCAFEPEN 67

Query: 183 SWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGDNDGIFAT 362
            WQLY+P++DLW+TLPVLPS+IR LAHFGVVS AGKL+VLGGGSDAVDPLTGD DG FAT
Sbjct: 68  LWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGDQDGNFAT 127

Query: 363 DEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEIYDPEKDV 542
           +EVWSYDPV+R WA RASMLVPRAMFACCVL GKI+VAGGFT+ RKSIS+AE+YDPEKDV
Sbjct: 128 NEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEMYDPEKDV 187

Query: 543 WIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQGPMAVVQ 722
           WI + DL  THNSAC+G+VIGGKVH+LHKGLS VQVLD     W +EDY WLQGPMAVV 
Sbjct: 188 WIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQGPMAVVH 247

Query: 723 GELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIGPGRWNVD 902
           G LYV+SHG+I KQ  E + RK+V +AS+F+ RIGFAM GLG ++Y+IGGVIGP RWN D
Sbjct: 248 GALYVMSHGLICKQ--EGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIGPDRWNWD 305

Query: 903 IKPLFDVDVLTVRSE 947
           IKP+ DVD+L V  E
Sbjct: 306 IKPMSDVDILAVGGE 320


>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
           gi|118482816|gb|ABK93324.1| unknown [Populus
           trichocarpa] gi|222857044|gb|EEE94591.1| f-box family
           protein [Populus trichocarpa]
          Length = 345

 Score =  481 bits (1239), Expect = e-134
 Identities = 229/312 (73%), Positives = 270/312 (86%)
 Frame = +3

Query: 3   LPDAVALQCLARVPFYAYPKLQLVCHSWREAIRSPELFRTRQELGASEELLCVSAFEPEN 182
           LPDAVA++C+ARVPFY +PKL+LV  SWR  +RSPELF+ RQE+G++E+LLCV AF+PEN
Sbjct: 8   LPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCVCAFDPEN 67

Query: 183 SWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGDNDGIFAT 362
            WQLY+P +DLW+TLPVLPS+IR LAHFGVVS AGKLFVLGGGSDAVDPLTGD DG FAT
Sbjct: 68  LWQLYDPHRDLWITLPVLPSKIRHLAHFGVVSSAGKLFVLGGGSDAVDPLTGDQDGSFAT 127

Query: 363 DEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEIYDPEKDV 542
           +EVWSYDPVLR WA RASMLVPRAMFAC  L+GKI+VAGGFT+ RKSIS+AE+YDPEKDV
Sbjct: 128 NEVWSYDPVLRQWAARASMLVPRAMFACGTLNGKIVVAGGFTSCRKSISQAEMYDPEKDV 187

Query: 543 WIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQGPMAVVQ 722
           WI + DL  THNS C+GVVIGGK+HVLH+GLSTVQVLD     W +EDYGWLQGPMAVV 
Sbjct: 188 WIPIPDLHRTHNSTCSGVVIGGKLHVLHRGLSTVQVLDNVGSGWTVEDYGWLQGPMAVVH 247

Query: 723 GELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIGPGRWNVD 902
             LYV+SHG+IFKQ  E + RK+V +AS+F+ RIGFAM+GLG ++Y+IGGVIGP RWN D
Sbjct: 248 DALYVMSHGLIFKQ--EGKTRKVVVSASEFRKRIGFAMMGLGDDIYVIGGVIGPDRWNWD 305

Query: 903 IKPLFDVDVLTV 938
           I+P+ DVD+LTV
Sbjct: 306 IRPMSDVDILTV 317


>ref|XP_002300832.1| f-box family protein [Populus trichocarpa]
           gi|222842558|gb|EEE80105.1| f-box family protein
           [Populus trichocarpa]
          Length = 345

 Score =  480 bits (1236), Expect = e-133
 Identities = 227/315 (72%), Positives = 272/315 (86%)
 Frame = +3

Query: 3   LPDAVALQCLARVPFYAYPKLQLVCHSWREAIRSPELFRTRQELGASEELLCVSAFEPEN 182
           LPDAVA++C+ARVPFY +PKL++V  SW+ A+RS ELF+ RQE+G++E+LLCV AF+PEN
Sbjct: 8   LPDAVAIRCIARVPFYLHPKLEVVSRSWQAAVRSTELFKARQEVGSAEDLLCVCAFDPEN 67

Query: 183 SWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGDNDGIFAT 362
            WQLY+P++DLW+TLP+LPS+IR LAHFGVV  AGKLFVLGGGSDAVDPLTGD DG FAT
Sbjct: 68  LWQLYDPLRDLWITLPILPSKIRHLAHFGVVCSAGKLFVLGGGSDAVDPLTGDQDGSFAT 127

Query: 363 DEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEIYDPEKDV 542
           +EVWSYDPVLR WA RASMLVPRAMFACC L+GKI+VAGGFT+ +KSIS+AE+YDPEKDV
Sbjct: 128 NEVWSYDPVLREWAARASMLVPRAMFACCALNGKIVVAGGFTSCQKSISQAEMYDPEKDV 187

Query: 543 WIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQGPMAVVQ 722
           W+ + DL  THNSAC+GVVIGGK+HVLH+GLSTVQVLD+    W +EDYGWLQGPMAVV 
Sbjct: 188 WVPIPDLHRTHNSACSGVVIGGKLHVLHRGLSTVQVLDSIGSGWTVEDYGWLQGPMAVVH 247

Query: 723 GELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIGPGRWNVD 902
             LYV+SHG+I KQ  E + RK+V +AS+F+ RIGFAM GLG E+Y+IGGVIGP RWN D
Sbjct: 248 DALYVMSHGLIVKQ--EGKTRKVVVSASEFRKRIGFAMTGLGDEMYVIGGVIGPDRWNWD 305

Query: 903 IKPLFDVDVLTVRSE 947
           IKP+ DVD+LTV  E
Sbjct: 306 IKPVSDVDILTVGGE 320


>ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1
           [Glycine max] gi|356536141|ref|XP_003536598.1|
           PREDICTED: F-box/kelch-repeat protein SKIP30-like
           isoform 2 [Glycine max] gi|356536143|ref|XP_003536599.1|
           PREDICTED: F-box/kelch-repeat protein SKIP30-like
           isoform 3 [Glycine max]
          Length = 344

 Score =  479 bits (1233), Expect = e-133
 Identities = 229/315 (72%), Positives = 272/315 (86%)
 Frame = +3

Query: 3   LPDAVALQCLARVPFYAYPKLQLVCHSWREAIRSPELFRTRQELGASEELLCVSAFEPEN 182
           LPDAVA++CLA VPFY +PKL+LV  +WR  +R PELF+ RQELG+SE+LLCV AFEPEN
Sbjct: 8   LPDAVAIRCLAWVPFYLHPKLELVSRAWRAVVRGPELFKARQELGSSEDLLCVCAFEPEN 67

Query: 183 SWQLYNPVKDLWMTLPVLPSQIRRLAHFGVVSIAGKLFVLGGGSDAVDPLTGDNDGIFAT 362
            WQLY+P +DLW+TLPVLPS+IR L+HFG VS AGKLFV+GGGSDAVDPLTGD DG FAT
Sbjct: 68  LWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFAT 127

Query: 363 DEVWSYDPVLRCWAQRASMLVPRAMFACCVLDGKIIVAGGFTNFRKSISKAEIYDPEKDV 542
           +EVWSYDPV+R W+ RA+MLVPR+MFACCV++GKI+VAGGFT+ RKSIS+AEIYDPEKDV
Sbjct: 128 NEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRKSISQAEIYDPEKDV 187

Query: 543 WIALQDLLLTHNSACTGVVIGGKVHVLHKGLSTVQVLDTSVLRWAIEDYGWLQGPMAVVQ 722
           WI + DL  THNSAC+GVVIGGKVHVLHK +STVQVLD +  +W +E+YGWL G MAV++
Sbjct: 188 WIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAG-QWTVEEYGWLHGQMAVIR 246

Query: 723 GELYVLSHGVIFKQDKEQRKRKMVTTASDFQTRIGFAMIGLGSELYMIGGVIGPGRWNVD 902
             LYV+SHG+I KQDK  + RK+V +AS+F+ RIGFAMIGLG ELY+IGGVIGP RWN D
Sbjct: 247 DALYVISHGLIIKQDK--KMRKVVGSASEFRRRIGFAMIGLGDELYVIGGVIGPDRWNWD 304

Query: 903 IKPLFDVDVLTVRSE 947
           IKPL DVDVLT+ SE
Sbjct: 305 IKPLSDVDVLTLASE 319