BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026675
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   362   6e-98
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-lik...   348   1e-93
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   341   1e-91
ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-lik...   340   2e-91
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   339   4e-91

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  362 bits (929), Expect = 6e-98
 Identities = 177/224 (79%), Positives = 195/224 (87%)
 Frame = -2

Query: 677 SKTEEEERGMQRYLFAVEYIGTRFSGSQKQTSNYRTVVGVLEEAFHKFIGRPVTVSCSSR 498
           SKT  +   +QRYL AVEYIGTRFSGSQ+Q  N RTV G L+EAFHKFIG+PV++ CSSR
Sbjct: 52  SKTMTQNPRVQRYLVAVEYIGTRFSGSQQQL-NCRTVAGALQEAFHKFIGQPVSIFCSSR 110

Query: 497 TDAGVHALCNVCHVDIERISKRKPGEVLPAHESEVVRKAVNHFLLKNEGDVMVTDVRCVP 318
           TDAGVHAL NVCHVD+ERISKRKPGEVLP HE  VVR+AVNHFL KNEGDVMV DVRCVP
Sbjct: 111 TDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVIDVRCVP 170

Query: 317 SDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEDLDFLAMQKACRVLIGCHDFSS 138
            DFHAR+KA+ERTYFYRLLSGPEPLS+FEKDRAWHVPEDLD LAMQKACRVL+GCHDFSS
Sbjct: 171 PDFHARYKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSS 230

Query: 137 FRAAGCQANSPIRTLDELNVSEVVSVPYFPTFTERGQAISSEQD 6
           FRAAGCQA SPIRTLDEL VSEV+  PYFP+ TER Q   +E++
Sbjct: 231 FRAAGCQAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEEN 274


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 369

 Score =  348 bits (892), Expect = 1e-93
 Identities = 176/238 (73%), Positives = 195/238 (81%), Gaps = 16/238 (6%)
 Frame = -2

Query: 692 KPVKISKTE--------EEERGM--------QRYLFAVEYIGTRFSGSQKQTSNYRTVVG 561
           +P KISK E        EEE GM        QRYL A+EYIGT FSGSQKQ  N RTVVG
Sbjct: 18  RPSKISKIEYPSDSDIDEEEEGMSQNPRNGIQRYLVAIEYIGTLFSGSQKQL-NVRTVVG 76

Query: 560 VLEEAFHKFIGRPVTVSCSSRTDAGVHALCNVCHVDIERISKRKPGEVLPAHESEVVRKA 381
            LEEAF KF+G+PV+VSCSSRTDAGVHAL NVCHVDI+RISKR+PGEVLP HE  VV +A
Sbjct: 77  ALEEAFSKFVGQPVSVSCSSRTDAGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRA 136

Query: 380 VNHFLLKNEGDVMVTDVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPED 201
           VNHFL K++ D+MV DVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPE+
Sbjct: 137 VNHFLQKHDSDLMVIDVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEE 196

Query: 200 LDFLAMQKACRVLIGCHDFSSFRAAGCQANSPIRTLDELNVSEVVSVPYFPTFTERGQ 27
           L   AMQ+ACRVL+GCHDFSSFRAAGCQA SPIRTLDEL+V+EV+  PYFP+  +R Q
Sbjct: 197 LSLPAMQEACRVLVGCHDFSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQ 254


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 372

 Score =  341 bits (875), Expect = 1e-91
 Identities = 170/208 (81%), Positives = 185/208 (88%)
 Frame = -2

Query: 650 MQRYLFAVEYIGTRFSGSQKQTSNYRTVVGVLEEAFHKFIGRPVTVSCSSRTDAGVHALC 471
           +QRYL AVEYIGT+F+GSQKQ  N RTVVGVLEEAF KFIG+ V+VS SSRTDAGVHAL 
Sbjct: 53  LQRYLIAVEYIGTKFAGSQKQL-NGRTVVGVLEEAFCKFIGQQVSVSLSSRTDAGVHALS 111

Query: 470 NVCHVDIERISKRKPGEVLPAHESEVVRKAVNHFLLKNEGDVMVTDVRCVPSDFHARFKA 291
           NVCHVDIERISKRKPGEVLP HE  VVR+AVNHFL KNEGD+MVTDVRCVPSDFHARFKA
Sbjct: 112 NVCHVDIERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVRCVPSDFHARFKA 171

Query: 290 QERTYFYRLLSGPEPLSTFEKDRAWHVPEDLDFLAMQKACRVLIGCHDFSSFRAAGCQAN 111
           QERTYFYR LSGPEPLSTFEKDRAWHV EDLD +AMQ+AC+VL+G HDFSSFRA+GCQA 
Sbjct: 172 QERTYFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRASGCQAK 231

Query: 110 SPIRTLDELNVSEVVSVPYFPTFTERGQ 27
           SPIRTL E++VSEV S  YFP+ TER Q
Sbjct: 232 SPIRTLAEISVSEVASTLYFPSITEREQ 259


>ref|XP_004161929.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 352

 Score =  340 bits (873), Expect = 2e-91
 Identities = 174/244 (71%), Positives = 194/244 (79%), Gaps = 14/244 (5%)
 Frame = -2

Query: 692 KPVKISKTEEE--------------ERGMQRYLFAVEYIGTRFSGSQKQTSNYRTVVGVL 555
           +P+KI KT +E              + G+QRYL AVEYIGTRF GSQ+Q  N RTVVG L
Sbjct: 19  RPLKIGKTTDELFHGDEEEAETMNPKPGIQRYLVAVEYIGTRFYGSQQQP-NCRTVVGAL 77

Query: 554 EEAFHKFIGRPVTVSCSSRTDAGVHALCNVCHVDIERISKRKPGEVLPAHESEVVRKAVN 375
           EEAF KFIG+PV+V CSSRTDAGVHAL NVCHVD+ERISKRKPGEVLP HE  VV KAVN
Sbjct: 78  EEAFQKFIGQPVSVFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVHKAVN 137

Query: 374 HFLLKNEGDVMVTDVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEDLD 195
           HFL K+EGDV V DVR VP+DFHAR+KAQERTYFYRL+SGPE LS+FEKDRAWHVPE L+
Sbjct: 138 HFLQKHEGDVTVVDVRSVPNDFHARYKAQERTYFYRLVSGPEALSSFEKDRAWHVPETLN 197

Query: 194 FLAMQKACRVLIGCHDFSSFRAAGCQANSPIRTLDELNVSEVVSVPYFPTFTERGQAISS 15
             AMQ+AC+VL+G HDFSSFRAAGCQANSPIRTLDELNV EV S PYFPT  ER Q    
Sbjct: 198 IGAMQEACKVLVGHHDFSSFRAAGCQANSPIRTLDELNVCEVASTPYFPTSMERKQRQGK 257

Query: 14  EQDQ 3
           E+ +
Sbjct: 258 EESE 261


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
           gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  339 bits (870), Expect = 4e-91
 Identities = 173/245 (70%), Positives = 195/245 (79%), Gaps = 6/245 (2%)
 Frame = -2

Query: 743 CNDSLNIQQVDXXXXXNKPVKISKTEEEE------RGMQRYLFAVEYIGTRFSGSQKQTS 582
           C+D+ NI +         P+     EEEE       G+QRYL A+EYIGTRFSGSQKQ  
Sbjct: 13  CSDN-NINRPSKISIIEYPIDSDIDEEEEMIKNPRNGIQRYLVAIEYIGTRFSGSQKQL- 70

Query: 581 NYRTVVGVLEEAFHKFIGRPVTVSCSSRTDAGVHALCNVCHVDIERISKRKPGEVLPAHE 402
           N RTVVGVLEEAF KF+G+PV+VSCSSRT AGVHAL NVCHVDI+RISKR+PGEVL  HE
Sbjct: 71  NVRTVVGVLEEAFSKFVGQPVSVSCSSRTVAGVHALSNVCHVDIQRISKRRPGEVLTPHE 130

Query: 401 SEVVRKAVNHFLLKNEGDVMVTDVRCVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDR 222
             VV +AVNHFL K + D+MV DVRCVPSDFHARFKAQER YFYRLLSGPEPLSTFEKDR
Sbjct: 131 PAVVGRAVNHFLQKQDSDLMVIDVRCVPSDFHARFKAQERIYFYRLLSGPEPLSTFEKDR 190

Query: 221 AWHVPEDLDFLAMQKACRVLIGCHDFSSFRAAGCQANSPIRTLDELNVSEVVSVPYFPTF 42
           AWHVPE+L   AMQ+ACRVL+G HDFSSFRAAGCQA SPIRTLDEL+V+EV+  PYFP+ 
Sbjct: 191 AWHVPEELSLPAMQEACRVLVGFHDFSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSL 250

Query: 41  TERGQ 27
            +R Q
Sbjct: 251 MDREQ 255