BLASTX nr result

ID: Coptis24_contig00026641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026641
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266049.1| PREDICTED: uncharacterized protein LOC100245...   278   1e-72
ref|XP_002272561.1| PREDICTED: uncharacterized protein LOC100249...   269   9e-70
ref|XP_002305647.1| predicted protein [Populus trichocarpa] gi|2...   265   2e-68
gb|ADL36767.1| MYB domain class transcription factor [Malus x do...   263   6e-68
ref|XP_002281638.1| PREDICTED: uncharacterized protein LOC100243...   262   1e-67

>ref|XP_002266049.1| PREDICTED: uncharacterized protein LOC100245492 [Vitis vinifera]
          Length = 362

 Score =  278 bits (712), Expect = 1e-72
 Identities = 166/304 (54%), Positives = 195/304 (64%), Gaps = 11/304 (3%)
 Frame = +1

Query: 1   RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR 180
           RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR
Sbjct: 54  RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR 113

Query: 181 KRLLRMGIDPVTHSPRXXXXXXXXXXXXXXCNSSQSNFSRLLGIQHVVNPEILRLATSLL 360
           KRLLRMGIDPVTHSPR               NSS  N SR LG+Q +VNPE+LRLATSL+
Sbjct: 114 KRLLRMGIDPVTHSPRLDLLDLSSILSTSLYNSSHMNVSRFLGMQPLVNPELLRLATSLM 173

Query: 361 SSQRANQECIRQNHQENQLYNSQVHDQFG--VQPVQLQPPSQKNVTCTTPSIHCTPFLDD 534
           SSQR N   + QN QENQL N+QV + F   VQP Q+Q P Q+   C   S   + F ++
Sbjct: 174 SSQRENPNFLLQNVQENQLCNAQVQNSFTHLVQPNQIQTPIQEIPACNPLS---SSFSNE 230

Query: 535 AQLMQANVEQFQTSPTSFSYQNTEPIV-WEQNA----EGIEDYAPQ-LDYGYF--NQSIV 690
           +Q+M+ N EQF ++ T FS QN++ I  W+ N        E Y P     GY+   Q+I+
Sbjct: 231 SQVMEPNAEQFPSNITDFSSQNSQLISDWQSNGLPSDLSEEYYVPHPSSVGYYGSEQTIM 290

Query: 691 DLLNENQNIDSNDNQNFXXXXXXXXXXXXXXXXXXXXXTYFNSSTEDERD-SYCSNMLKF 867
           D  ++N    SN+N +F                     TY NSSTEDER+ SY SNM   
Sbjct: 291 DPSSDNSVFQSNNNFSF---ASVLSTPSSSPTPLNSNSTYINSSTEDEREISYGSNMYLK 347

Query: 868 YEIP 879
           +E P
Sbjct: 348 FETP 351


>ref|XP_002272561.1| PREDICTED: uncharacterized protein LOC100249492 [Vitis vinifera]
           gi|296081266|emb|CBI18010.3| unnamed protein product
           [Vitis vinifera]
          Length = 334

 Score =  269 bits (687), Expect = 9e-70
 Identities = 159/306 (51%), Positives = 188/306 (61%), Gaps = 4/306 (1%)
 Frame = +1

Query: 1   RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR 180
           RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR
Sbjct: 54  RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR 113

Query: 181 KRLLRMGIDPVTHSPRXXXXXXXXXXXXXXCNSSQSNFSRLLGIQHVVNPEILRLATSLL 360
           KRLLRMGIDPVTHSPR              C+SSQ NFS LLGIQ +VNPE+LRLA++LL
Sbjct: 114 KRLLRMGIDPVTHSPRLDLLDISSLLSSSVCSSSQLNFSNLLGIQTLVNPELLRLASTLL 173

Query: 361 SSQRANQECIRQNHQENQLYNSQVHDQFGVQPVQLQPPSQKNVTCTTPSIHCTPFLDDAQ 540
           S +  N        Q  Q++NSQV +Q         PP Q N        H TP   +A 
Sbjct: 174 SLKHENPHF----PQNPQIWNSQVQNQINT------PPLQSN------QFHATP-TQEAA 216

Query: 541 LMQANVEQFQTSPTSFSYQNTEPIVWEQNAEGIEDYAPQLDYGYFNQS----IVDLLNEN 708
            MQAN E   ++ T+ SYQN  P  ++      E  A   +YG+ N S       L N+N
Sbjct: 217 AMQANTEGLPSNLTNPSYQNFTPSNFD------ESLASLPNYGFINPSETSTFQSLENQN 270

Query: 709 QNIDSNDNQNFXXXXXXXXXXXXXXXXXXXXXTYFNSSTEDERDSYCSNMLKFYEIPRTF 888
            ++  N+NQ F                     T+ N+  EDER+SYCS+MLKF EIP +F
Sbjct: 271 NDLYYNNNQGF-GFDSVISTPISSPTQLNSSSTFINTGNEDERESYCSSMLKF-EIPESF 328

Query: 889 NVNGYM 906
           N++ +M
Sbjct: 329 NISEFM 334


>ref|XP_002305647.1| predicted protein [Populus trichocarpa] gi|222848611|gb|EEE86158.1|
            predicted protein [Populus trichocarpa]
          Length = 376

 Score =  265 bits (676), Expect = 2e-68
 Identities = 166/325 (51%), Positives = 196/325 (60%), Gaps = 23/325 (7%)
 Frame = +1

Query: 1    RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR 180
            RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR
Sbjct: 54   RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR 113

Query: 181  KRLLRMGIDPVTHSPRXXXXXXXXXXXXXXCNSS-QSNFSRLLGIQHVVNPEILRLATSL 357
            KRLLRMGIDPVTHSPR               NSS Q N SR+LG+  +VNP +LRLATSL
Sbjct: 114  KRLLRMGIDPVTHSPRLDLLDLSSILSSSLYNSSDQMNMSRMLGVPPLVNPGLLRLATSL 173

Query: 358  LSSQR-ANQECIRQNHQEN------QLYNSQVHDQFGVQPVQLQPPSQKNVTCTT-PSIH 513
            LSSQR   Q  + QN QE       Q+  SQ         +Q Q P Q+  TCTT  +  
Sbjct: 174  LSSQRDQTQNFVIQNGQEENHLPNPQVQQSQYESMIHQANIQFQTPGQEMPTCTTLTTSP 233

Query: 514  CTPFLDDAQLMQANVEQFQTSP-TSFSYQNTEPIV---WEQNAEG---IEDY-----APQ 657
            C  F ++A++M  NV+Q+Q+S  T+FS  N++      W+ N  G    EDY     +  
Sbjct: 234  CVTFSNEARIMDPNVDQYQSSTITNFSSPNSQFSTHDQWQNNGMGSNLAEDYYVPAVSSY 293

Query: 658  LDYGYFNQSIVDLLNENQNIDSN-DNQNFXXXXXXXXXXXXXXXXXXXXXTYFNSST-ED 831
               GY+   ++D  +E     SN  NQNF                     TY NSS+ ED
Sbjct: 294  NSNGYYGSDLMDPSSETSTFISNSSNQNF-GFASVLSTPSSSPTPLNSNSTYINSSSAED 352

Query: 832  ERDSYCSNMLKFYEIPRTFNVNGYM 906
            ER+SYCSN+LKF EIP   +   +M
Sbjct: 353  ERESYCSNILKF-EIPDILDAINFM 376


>gb|ADL36767.1| MYB domain class transcription factor [Malus x domestica]
          Length = 352

 Score =  263 bits (671), Expect = 6e-68
 Identities = 166/319 (52%), Positives = 193/319 (60%), Gaps = 17/319 (5%)
 Frame = +1

Query: 1   RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR 180
           RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR
Sbjct: 54  RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR 113

Query: 181 KRLLRMGIDPVTHSPRXXXXXXXXXXXXXXCNSSQ-SNFSRLLGIQHVVNPEILRLATSL 357
           KRLLRMGIDPVTHSPR               +  Q +NFSRLLG    +NPE+LRLATSL
Sbjct: 114 KRLLRMGIDPVTHSPRLDLLDFSSILYNSSHHHHQMNNFSRLLGQPIGLNPELLRLATSL 173

Query: 358 LSSQR---ANQECIRQNHQEN---QLYNSQVHDQFGVQPVQLQPPSQKNVTCTTPSIHCT 519
           + S+R   +NQ  + QN QEN   Q+ N Q+  Q   QPVQ   P    V          
Sbjct: 174 IQSRRENNSNQNFVLQNAQENDYHQICNPQIQPQ---QPVQDNVPYPNEV---------- 220

Query: 520 PFLDDAQLM--QANVEQFQTSPTSFSYQNTEPIVWEQN---AEGIEDYAPQLDYGYF--- 675
                +QLM  Q NVE + +S + F  QN++   W+ N   +   E+Y     + YF   
Sbjct: 221 -----SQLMQQQPNVE-YPSSLSDFRSQNSQLNEWQSNVGTSNFTEEYVELPSFAYFGSE 274

Query: 676 -NQSIVDLLNENQNIDSND-NQNFXXXXXXXXXXXXXXXXXXXXXTYFNSSTEDERDSYC 849
            +Q+++DL  EN N  SN+ NQNF                     TYFNS TEDER+SYC
Sbjct: 275 QHQTVLDLSPENSNFHSNNSNQNFSFTSVFSTPSSSPTTLNSNSTTYFNSGTEDERESYC 334

Query: 850 SNMLKFYEIPRTFNVNGYM 906
           SNMLKF  IP    VN +M
Sbjct: 335 SNMLKF-GIPDILGVNEFM 352


>ref|XP_002281638.1| PREDICTED: uncharacterized protein LOC100243528 [Vitis vinifera]
          Length = 361

 Score =  262 bits (669), Expect = 1e-67
 Identities = 157/309 (50%), Positives = 179/309 (57%), Gaps = 7/309 (2%)
 Frame = +1

Query: 1   RLRWTNYLRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIR 180
           RLRWTNYLRPDIKRGRFSFEEEE IIQLH ILGNKWSAIAARLPGRTDNEIKNYWNT IR
Sbjct: 54  RLRWTNYLRPDIKRGRFSFEEEEAIIQLHGILGNKWSAIAARLPGRTDNEIKNYWNTRIR 113

Query: 181 KRLLRMGIDPVTHSPRXXXXXXXXXXXXXXCNSS-QSNF-SRLLGIQHVVNPEILRLATS 354
           K+LLRMGIDPVTH+PR               NSS Q N  +  LG+  +VN ++L LAT+
Sbjct: 114 KKLLRMGIDPVTHAPRMDLLELASLLGSSLYNSSLQLNVPAGSLGMGPMVNDDVLTLATA 173

Query: 355 LLSSQRANQECIRQNHQENQLYNSQVHDQF-GVQPVQLQPPSQKNVTCTTPSIHCTPFLD 531
           LLSS   N E   QN  ENQL N QV +QF   Q   LQ   Q+   C T S   TPFL+
Sbjct: 174 LLSSHCENPELQLQNLLENQLRNPQVQNQFESFQGNNLQSSIQEVQACPTSSAASTPFLN 233

Query: 532 DAQLMQANVEQFQTSPTSFSYQNTEPIVWEQNA----EGIEDYAPQLDYGYFNQSIVDLL 699
           + QLMQA  E    +PT F+YQN+ P +W+ +            P L +     SI    
Sbjct: 234 ETQLMQAIAEHLSQNPTDFAYQNSLPNLWQVHGGHPITAASFTNPTLSFDSIPSSITGHQ 293

Query: 700 NENQNIDSNDNQNFXXXXXXXXXXXXXXXXXXXXXTYFNSSTEDERDSYCSNMLKFYEIP 879
               N  SN+ QNF                     TY   STEDERDSYCSN L F +IP
Sbjct: 294 TLKSNAVSNNTQNFSFDSVLSTPSSTSTPLDSSQMTYAKGSTEDERDSYCSNFLMF-DIP 352

Query: 880 RTFNVNGYM 906
              +VN  M
Sbjct: 353 SDLDVNAIM 361


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