BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026635
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281726.1| PREDICTED: double-strand break repair protei...    55   5e-15
gb|EEE61764.1| hypothetical protein OsJ_16317 [Oryza sativa Japo...    56   2e-09
gb|EEC78093.1| hypothetical protein OsI_17582 [Oryza sativa Indi...    56   2e-09
ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2...    47   9e-09
gb|AAX24126.1| putative MRE11 [Oryza sativa]                           51   6e-08

>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis
           vinifera] gi|302143084|emb|CBI20379.3| unnamed protein
           product [Vitis vinifera]
          Length = 731

 Score = 55.5 bits (132), Expect(2) = 5e-15
 Identities = 29/50 (58%), Positives = 36/50 (72%)
 Frame = +1

Query: 1   DTVAFAEEDLILKVEECMQERVKERSSLSKEGTSFLSLSQSLLDARGKTT 150
           D + F EEDLILKV EC++ERVKERS  SKE   F+S ++SL + R K T
Sbjct: 484 DPLKFEEEDLILKVGECLEERVKERSVHSKETPQFMSSARSLENIRSKGT 533



 Score = 50.1 bits (118), Expect(2) = 5e-15
 Identities = 27/46 (58%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = +2

Query: 245 GISNSFSDDDESAQLVASSTA-RGRKVSSAAFRSSHEASEIGKSKT 379
           G + SFSDD++  QL  S +A RGRK SSA F+SSH+ASE GK K+
Sbjct: 537 GSAVSFSDDEDPTQLSGSKSATRGRKGSSATFKSSHDASEQGKGKS 582


>gb|EEE61764.1| hypothetical protein OsJ_16317 [Oryza sativa Japonica Group]
          Length = 686

 Score = 55.8 bits (133), Expect(2) = 2e-09
 Identities = 28/49 (57%), Positives = 35/49 (71%)
 Frame = +1

Query: 1   DTVAFAEEDLILKVEECMQERVKERSSLSKEGTSFLSLSQSLLDARGKT 147
           D     EED+I+KV ECMQERVKERS  SKE + F S SQ+L+D  G++
Sbjct: 461 DKFKIEEEDIIVKVGECMQERVKERSLRSKEDSRFTSSSQNLVDTGGRS 509



 Score = 30.8 bits (68), Expect(2) = 2e-09
 Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
 Frame = +2

Query: 254 NSFSDDDESAQLV--ASSTARGRKVSSAAFRSSHEASEIGKSKT 379
           NSFSDD+++ +++  A +T  GRK S    R S +A+++ K+ T
Sbjct: 517 NSFSDDEDTREMLLGARTTNAGRKASGFT-RPSKDATDVAKTGT 559


>gb|EEC78093.1| hypothetical protein OsI_17582 [Oryza sativa Indica Group]
          Length = 686

 Score = 55.8 bits (133), Expect(2) = 2e-09
 Identities = 28/49 (57%), Positives = 35/49 (71%)
 Frame = +1

Query: 1   DTVAFAEEDLILKVEECMQERVKERSSLSKEGTSFLSLSQSLLDARGKT 147
           D     EED+I+KV ECMQERVKERS  SKE + F S SQ+L+D  G++
Sbjct: 461 DKFKIEEEDIIVKVGECMQERVKERSLRSKEDSRFTSSSQNLVDTGGRS 509



 Score = 30.8 bits (68), Expect(2) = 2e-09
 Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
 Frame = +2

Query: 254 NSFSDDDESAQLV--ASSTARGRKVSSAAFRSSHEASEIGKSKT 379
           NSFSDD+++ +++  A +T  GRK S    R S +A+++ K+ T
Sbjct: 517 NSFSDDEDTREMLLGARTTNAGRKASGFT-RPSKDATDVAKTGT 559


>ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score = 47.0 bits (110), Expect(2) = 9e-09
 Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = +2

Query: 245 GISNSFSDDDESAQLVAS-STARGRKVSSAAFRSSHEASEIGKSKT 379
           G + SFSD++++AQ+  S ST RGRK S    RSSH+ SE GK KT
Sbjct: 530 GSAVSFSDEEDAAQISGSTSTTRGRKGSRVGSRSSHDVSETGKGKT 575



 Score = 37.4 bits (85), Expect(2) = 9e-09
 Identities = 23/46 (50%), Positives = 28/46 (60%)
 Frame = +1

Query: 1   DTVAFAEEDLILKVEECMQERVKERSSLSKEGTSFLSLSQSLLDAR 138
           DT+ F +EDLILK      ERVKERS  S +   F S +QS+ D R
Sbjct: 484 DTMKFEDEDLILK------ERVKERSVHSTDAAQFTSGAQSMEDFR 523


>gb|AAX24126.1| putative MRE11 [Oryza sativa]
          Length = 706

 Score = 50.8 bits (120), Expect(2) = 6e-08
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +1

Query: 1   DTVAFAEEDLILKVEECMQERVKERSSLSKEGTSFLSLSQSLLDARGKT 147
           D     EED+I+KV ECMQERVKERS  SKE + F S SQ+ LD  G++
Sbjct: 482 DKFKIEEEDIIVKVGECMQERVKERSLRSKEDSRFTSSSQN-LDTGGRS 529



 Score = 30.8 bits (68), Expect(2) = 6e-08
 Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
 Frame = +2

Query: 254 NSFSDDDESAQLV--ASSTARGRKVSSAAFRSSHEASEIGKSKT 379
           NSFSDD+++ +++  A +T  GRK S    R S +A+++ K+ T
Sbjct: 537 NSFSDDEDTREMLLGARTTNAGRKASGFT-RPSKDATDVAKTGT 579