BLASTX nr result

ID: Coptis24_contig00026618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026618
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [...   102   5e-20
emb|CBI19038.3| unnamed protein product [Vitis vinifera]               97   3e-18
ref|XP_002284458.1| PREDICTED: auxin-induced protein 5NG4 [Vitis...    97   3e-18
ref|XP_003527931.1| PREDICTED: auxin-induced protein 5NG4-like [...    90   4e-16
ref|XP_002513791.1| Auxin-induced protein 5NG4, putative [Ricinu...    89   5e-16

>ref|XP_002284452.2| PREDICTED: auxin-induced protein 5NG4-like [Vitis vinifera]
           gi|302141836|emb|CBI19039.3| unnamed protein product
           [Vitis vinifera]
          Length = 382

 Score =  102 bits (255), Expect = 5e-20
 Identities = 50/80 (62%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
 Frame = -2

Query: 642 FVTAFNPLCMIIVAVLGTMIIAEPLHLGSLIGSLVIVVGLYSVIWGKSKDQSG-SSTLTD 466
           FVTAFNPLCMIIVA LGT+I+AE LHLGS+IG+++I +GLYSV WGKSKDQ G + T T+
Sbjct: 285 FVTAFNPLCMIIVAALGTLILAEQLHLGSIIGAIIIAIGLYSVAWGKSKDQFGPTPTTTE 344

Query: 465 GNASCFELPIAAKYSNKIGI 406
                +ELPI+A   +K+ I
Sbjct: 345 EKGDAYELPISATEGSKLVI 364


>emb|CBI19038.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
 Frame = -2

Query: 642 FVTAFNPLCMIIVAVLGTMIIAEPLHLGSLIGSLVIVVGLYSVIWGKSKDQSGSSTLTDG 463
           FVTAFNPLCM+IVA LG++I+AE LHLGS+IG+++I VGLYSV WGKSKD    +  T G
Sbjct: 285 FVTAFNPLCMVIVAALGSLILAEELHLGSIIGAIIIAVGLYSVAWGKSKDHFSPAPSTTG 344

Query: 462 -NASCFELPIAAKYSNKIGIPMSVIDRDNTIPKVNSGT 352
                ++LPI A  + K+ I  S  D D    K    T
Sbjct: 345 EKTDPYQLPILATENTKLVIEGSNYDDDEKAAKSKEKT 382


>ref|XP_002284458.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
          Length = 381

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
 Frame = -2

Query: 642 FVTAFNPLCMIIVAVLGTMIIAEPLHLGSLIGSLVIVVGLYSVIWGKSKDQSGSSTLTDG 463
           FVTAFNPLCM+IVA LG++I+AE LHLGS+IG+++I VGLYSV WGKSKD    +  T G
Sbjct: 283 FVTAFNPLCMVIVAALGSLILAEELHLGSIIGAIIIAVGLYSVAWGKSKDHFSPAPSTTG 342

Query: 462 -NASCFELPIAAKYSNKIGIPMSVIDRDNTIPKVNSGT 352
                ++LPI A  + K+ I  S  D D    K    T
Sbjct: 343 EKTDPYQLPILATENTKLVIEGSNYDDDEKAAKSKVAT 380


>ref|XP_003527931.1| PREDICTED: auxin-induced protein 5NG4-like [Glycine max]
          Length = 392

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 46/79 (58%), Positives = 54/79 (68%)
 Frame = -2

Query: 642 FVTAFNPLCMIIVAVLGTMIIAEPLHLGSLIGSLVIVVGLYSVIWGKSKDQSGSSTLTDG 463
           F TAFNPLCMIIVA LG++I+ E LHLGSLIG +VI VGLYSV+WGK+KD S     +  
Sbjct: 289 FATAFNPLCMIIVAALGSLILGELLHLGSLIGGIVIAVGLYSVVWGKAKDYSEPKLPSAN 348

Query: 462 NASCFELPIAAKYSNKIGI 406
                 LPI A   +KI I
Sbjct: 349 AEDTKSLPITATDDSKIDI 367


>ref|XP_002513791.1| Auxin-induced protein 5NG4, putative [Ricinus communis]
           gi|223546877|gb|EEF48374.1| Auxin-induced protein 5NG4,
           putative [Ricinus communis]
          Length = 331

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 45/73 (61%), Positives = 59/73 (80%), Gaps = 2/73 (2%)
 Frame = -2

Query: 642 FVTAFNPLCMIIVAVLGTMIIAEPLHLGSLIGSLVIVVGLYSVIWGKSKDQSGSS--TLT 469
           FVTAFNPLCMIIVAVLG++I+AE L+LGS++G ++I +GLYSV+WGKSKD S +    +T
Sbjct: 249 FVTAFNPLCMIIVAVLGSIILAEKLYLGSILGGIIIAIGLYSVVWGKSKDYSSNQEPPIT 308

Query: 468 DGNASCFELPIAA 430
           +  A+  ELPI A
Sbjct: 309 EKGAAP-ELPITA 320


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