BLASTX nr result

ID: Coptis24_contig00026615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026615
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB62040.1| CjMDR1 [Coptis japonica]                               89   4e-16
emb|CBI30804.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002271185.1| PREDICTED: ABC transporter B family member 9...    88   6e-16
emb|CAN77320.1| hypothetical protein VITISV_009891 [Vitis vinifera]    88   6e-16
ref|XP_003593853.1| ABC transporter B family member [Medicago tr...    87   1e-15

>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
          Length = 1289

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/76 (61%), Positives = 52/76 (68%)
 Frame = +1

Query: 52   GAIGARLSADASTVRSLVGDFLALMVQSGFTAVAGIVIAFTANWMXXXXXXXXXXXXXXQ 231
            GAIGA+LSADASTVR LVGD LAL+VQ+  TAV G+VIAF ANW                
Sbjct: 823  GAIGAKLSADASTVRGLVGDALALLVQNAATAVCGLVIAFVANWTLALIILVLIPLIGVN 882

Query: 232  GYAQMKSLKGFSADAK 279
            GY QMK +KGFSADAK
Sbjct: 883  GYVQMKFMKGFSADAK 898


>emb|CBI30804.3| unnamed protein product [Vitis vinifera]
          Length = 1930

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = +1

Query: 52  GAIGARLSADASTVRSLVGDFLALMVQSGFTAVAGIVIAFTANWMXXXXXXXXXXXXXXQ 231
           GA+GARLS DAS+VRSLVGD LAL+VQ+  T +AG+VI+FTANW+              Q
Sbjct: 710 GAVGARLSTDASSVRSLVGDALALVVQNLTTVIAGLVISFTANWILALIILAVLPLVFLQ 769

Query: 232 GYAQMKSLKGFSADAK 279
           GY QMK +KGFSADAK
Sbjct: 770 GYFQMKFVKGFSADAK 785



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 42/76 (55%), Positives = 52/76 (68%)
 Frame = +1

Query: 52   GAIGARLSADASTVRSLVGDFLALMVQSGFTAVAGIVIAFTANWMXXXXXXXXXXXXXXQ 231
            GA+GARLS +A+ VRSLVGD LAL++Q+  T VAG+ I+FTANW               Q
Sbjct: 1731 GAVGARLSTNAAAVRSLVGDALALVIQNISTVVAGLAISFTANWSLALVILAVLPLVGLQ 1790

Query: 232  GYAQMKSLKGFSADAK 279
            GY QMK ++GFSADAK
Sbjct: 1791 GYLQMKFMEGFSADAK 1806


>ref|XP_002271185.1| PREDICTED: ABC transporter B family member 9-like [Vitis vinifera]
          Length = 1270

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = +1

Query: 52   GAIGARLSADASTVRSLVGDFLALMVQSGFTAVAGIVIAFTANWMXXXXXXXXXXXXXXQ 231
            GA+GARLS DAS+VRSLVGD LAL+VQ+  T +AG+VI+FTANW+              Q
Sbjct: 803  GAVGARLSTDASSVRSLVGDALALVVQNLTTVIAGLVISFTANWILALIILAVLPLVFLQ 862

Query: 232  GYAQMKSLKGFSADAK 279
            GY QMK +KGFSADAK
Sbjct: 863  GYFQMKFVKGFSADAK 878


>emb|CAN77320.1| hypothetical protein VITISV_009891 [Vitis vinifera]
          Length = 2006

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/76 (60%), Positives = 55/76 (72%)
 Frame = +1

Query: 52   GAIGARLSADASTVRSLVGDFLALMVQSGFTAVAGIVIAFTANWMXXXXXXXXXXXXXXQ 231
            GA+GARLS DAS+VRSLVGD LAL+VQ+  T +AG+VI+FTANW+              Q
Sbjct: 796  GAVGARLSTDASSVRSLVGDALALVVQNLTTVIAGLVISFTANWILALIILAVLPLVFLQ 855

Query: 232  GYAQMKSLKGFSADAK 279
            GY QMK +KGFSADAK
Sbjct: 856  GYFQMKFVKGFSADAK 871



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/76 (53%), Positives = 51/76 (67%)
 Frame = +1

Query: 52   GAIGARLSADASTVRSLVGDFLALMVQSGFTAVAGIVIAFTANWMXXXXXXXXXXXXXXQ 231
            GA+ ARLS +A+ VRSLVGD LAL++Q+  T VAG+ I+FTANW               Q
Sbjct: 1839 GAVXARLSTBAAAVRSLVGDALALVIQNISTVVAGLAISFTANWSLALVILAVLPLVGLQ 1898

Query: 232  GYAQMKSLKGFSADAK 279
            GY QMK ++GFSADAK
Sbjct: 1899 GYLQMKFMEGFSADAK 1914


>ref|XP_003593853.1| ABC transporter B family member [Medicago truncatula]
            gi|355482901|gb|AES64104.1| ABC transporter B family
            member [Medicago truncatula]
          Length = 1279

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/76 (60%), Positives = 54/76 (71%)
 Frame = +1

Query: 52   GAIGARLSADASTVRSLVGDFLALMVQSGFTAVAGIVIAFTANWMXXXXXXXXXXXXXXQ 231
            GA+GARLS DASTV+SLVGD +AL+VQ+  T +AG+VIAFTANW+              Q
Sbjct: 813  GAVGARLSIDASTVKSLVGDTMALIVQNISTVIAGLVIAFTANWILAFIVLVLTPMILMQ 872

Query: 232  GYAQMKSLKGFSADAK 279
            G  QMK LKGFSADAK
Sbjct: 873  GIVQMKFLKGFSADAK 888


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