BLASTX nr result

ID: Coptis24_contig00026602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026602
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAM12499.1| small heat-shock protein [Chenopodium rubrum]         108   6e-22
gb|AFK44065.1| unknown [Medicago truncatula]                          106   3e-21
gb|AEK12766.1| hsp23 [Medicago sativa]                                106   3e-21
sp|P11890.1|HS23C_CHERU RecName: Full=Small heat shock protein, ...   105   4e-21
gb|AEX97054.1| mitochondrial heat shock protein [Copaifera offic...   104   1e-20

>emb|CAM12499.1| small heat-shock protein [Chenopodium rubrum]
          Length = 204

 Score =  108 bits (270), Expect = 6e-22
 Identities = 59/124 (47%), Positives = 79/124 (63%), Gaps = 6/124 (4%)
 Frame = +2

Query: 215 PTPFSADVSKPISKPRSTGQAFNKLDEVV-HPFLSPSCG-----RKNWSRKDEDEAMQLK 376
           P  F +DV  P    RS GQ  N +D+++ +PF++ S G     R+ W  ++++EA++LK
Sbjct: 60  PASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELK 119

Query: 377 IDMPGLGKEHVKVTVEDNILIIKGEEPKEAEGDNVRAANIYSLKFVTPTELYKVDQIKAE 556
           +DMPGL KE VKV+VEDN LIIKGE  KE E +  R    YS +      LYK+D IKAE
Sbjct: 120 VDMPGLAKEDVKVSVEDNTLIIKGEAEKETEEEEQRRR--YSYRIELTPNLYKIDGIKAE 177

Query: 557 MKNG 568
           MKNG
Sbjct: 178 MKNG 181


>gb|AFK44065.1| unknown [Medicago truncatula]
          Length = 209

 Score =  106 bits (264), Expect = 3e-21
 Identities = 58/122 (47%), Positives = 79/122 (64%), Gaps = 7/122 (5%)
 Frame = +2

Query: 224 FSADVSKPISKPRSTGQAFNKLDEVV-HPFLSPSCG------RKNWSRKDEDEAMQLKID 382
           F +DV  P S  RS  Q  N +D+++ +PFLS S G      R+ W  K+ ++++ L++D
Sbjct: 66  FLSDVFDPFSPSRSLSQVLNMVDQLMDNPFLSASRGIGAGGARRGWDAKETEDSLLLRLD 125

Query: 383 MPGLGKEHVKVTVEDNILIIKGEEPKEAEGDNVRAANIYSLKFVTPTELYKVDQIKAEMK 562
           MPGLGKE VK++VE N L IKGE  KE+E D    A  +S +   P +LYK+DQIKAEMK
Sbjct: 126 MPGLGKEDVKISVEQNALTIKGEGAKESEEDE-EGARRFSSRIDLPEKLYKIDQIKAEMK 184

Query: 563 NG 568
           NG
Sbjct: 185 NG 186


>gb|AEK12766.1| hsp23 [Medicago sativa]
          Length = 209

 Score =  106 bits (264), Expect = 3e-21
 Identities = 58/122 (47%), Positives = 79/122 (64%), Gaps = 7/122 (5%)
 Frame = +2

Query: 224 FSADVSKPISKPRSTGQAFNKLDEVV-HPFLSPSCG------RKNWSRKDEDEAMQLKID 382
           F +DV  P S  RS  Q  N +D+++ +PFLS S G      R+ W  K+ ++++ L++D
Sbjct: 66  FLSDVFDPFSPTRSLSQVLNMVDQLMDNPFLSASRGIGAGGARRGWDAKETEDSLLLRLD 125

Query: 383 MPGLGKEHVKVTVEDNILIIKGEEPKEAEGDNVRAANIYSLKFVTPTELYKVDQIKAEMK 562
           MPGLGKE VK++VE N L IKGE  KE+E D    A  +S +   P +LYK+DQIKAEMK
Sbjct: 126 MPGLGKEDVKISVEQNTLTIKGEGAKESEEDE-EGARRFSSRIDLPEKLYKIDQIKAEMK 184

Query: 563 NG 568
           NG
Sbjct: 185 NG 186


>sp|P11890.1|HS23C_CHERU RecName: Full=Small heat shock protein, chloroplastic; Flags:
           Precursor gi|18150|emb|CAA33388.1| unnamed protein
           product [Chenopodium rubrum]
          Length = 204

 Score =  105 bits (263), Expect = 4e-21
 Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 6/124 (4%)
 Frame = +2

Query: 215 PTPFSADVSKPISKPRSTGQAFNKLDEVV-HPFLSPSCG-----RKNWSRKDEDEAMQLK 376
           P  F +DV  P    RS GQ  N +D+++ +PF++ S G     R+ W  ++++EA++LK
Sbjct: 60  PASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELK 119

Query: 377 IDMPGLGKEHVKVTVEDNILIIKGEEPKEAEGDNVRAANIYSLKFVTPTELYKVDQIKAE 556
           +DMPGL KE VKV+VEDN LIIK E  KE E +  R    YS +      LYK+D IKAE
Sbjct: 120 VDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRR--YSSRIELTPNLYKIDGIKAE 177

Query: 557 MKNG 568
           MKNG
Sbjct: 178 MKNG 181


>gb|AEX97054.1| mitochondrial heat shock protein [Copaifera officinalis]
          Length = 214

 Score =  104 bits (259), Expect = 1e-20
 Identities = 61/119 (51%), Positives = 78/119 (65%), Gaps = 7/119 (5%)
 Frame = +2

Query: 233 DVSKPISKPRSTGQAFNKLDEVV-HPFLSPSCG------RKNWSRKDEDEAMQLKIDMPG 391
           DV  P S  RS  Q  N +D+ V +PFLS S G      R+ W  K+ ++A+ L++DMPG
Sbjct: 75  DVFDPFSPTRSLSQVLNLMDQFVDNPFLSASRGIGAGGLRRGWDAKETEDALFLRVDMPG 134

Query: 392 LGKEHVKVTVEDNILIIKGEEPKEAEGDNVRAANIYSLKFVTPTELYKVDQIKAEMKNG 568
           LGK+ VKV+VE N LIIKGE  KE EG+   +A  YS +   P +LYK+DQIKAEMKNG
Sbjct: 135 LGKDDVKVSVEQNTLIIKGEGGKE-EGEE-DSARRYSSRIDLPEKLYKIDQIKAEMKNG 191


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