BLASTX nr result

ID: Coptis24_contig00026586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026586
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309534.1| predicted protein [Populus trichocarpa] gi|2...    55   1e-11
emb|CAZ48475.1| NADP-dependent malic enzyme [Lepturus repens]          53   1e-10
ref|NP_001233951.1| cytosolic NADP-malic enzyme [Solanum lycoper...    51   4e-10
ref|NP_001105292.1| NADP malic enzyme4 [Zea mays] gi|57867869|gb...    51   5e-10
gb|AFW85113.1| malic enzyme Precursor [Zea mays]                       51   5e-10

>ref|XP_002309534.1| predicted protein [Populus trichocarpa] gi|222855510|gb|EEE93057.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score = 54.7 bits (130), Expect(2) = 1e-11
 Identities = 32/72 (44%), Positives = 36/72 (50%)
 Frame = +2

Query: 2   EACQKYGSIFRHPQALYISLKERYAIFQLKCGMPSYLFTLLYT*S*DRLGYCRGKILEVL 181
           EACQKYGSIFR PQ LYISLKE                              +GKILEVL
Sbjct: 123 EACQKYGSIFRRPQGLYISLKE------------------------------KGKILEVL 152

Query: 182 KYWPKRTIQ*VI 217
           K WP+  IQ ++
Sbjct: 153 KNWPESNIQVIV 164



 Score = 39.3 bits (90), Expect(2) = 1e-11
 Identities = 19/23 (82%), Positives = 19/23 (82%)
 Frame = +3

Query: 204 SNKLYIGVTDGERILGLGDLGCQ 272
           SN   I VTDGERILGLGDLGCQ
Sbjct: 158 SNIQVIVVTDGERILGLGDLGCQ 180


>emb|CAZ48475.1| NADP-dependent malic enzyme [Lepturus repens]
          Length = 365

 Score = 53.1 bits (126), Expect(2) = 1e-10
 Identities = 30/72 (41%), Positives = 37/72 (51%)
 Frame = +2

Query: 2   EACQKYGSIFRHPQALYISLKERYAIFQLKCGMPSYLFTLLYT*S*DRLGYCRGKILEVL 181
           EACQKYGSI+R PQ LYISLK+                              +GK LEVL
Sbjct: 20  EACQKYGSIYRRPQGLYISLKD------------------------------KGKTLEVL 49

Query: 182 KYWPKRTIQ*VI 217
           K WP+R+IQ ++
Sbjct: 50  KNWPERSIQVIV 61



 Score = 37.7 bits (86), Expect(2) = 1e-10
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +3

Query: 219 IGVTDGERILGLGDLGCQ 272
           I VTDGERILGLGDLGCQ
Sbjct: 60  IVVTDGERILGLGDLGCQ 77


>ref|NP_001233951.1| cytosolic NADP-malic enzyme [Solanum lycopersicum]
           gi|2150029|gb|AAB58728.1| cytosolic NADP-malic enzyme
           [Solanum lycopersicum]
          Length = 579

 Score = 51.2 bits (121), Expect(2) = 4e-10
 Identities = 28/72 (38%), Positives = 37/72 (51%)
 Frame = +2

Query: 2   EACQKYGSIFRHPQALYISLKERYAIFQLKCGMPSYLFTLLYT*S*DRLGYCRGKILEVL 181
           EACQKYGS+F+ PQ LYISL E                              +G+ILEVL
Sbjct: 133 EACQKYGSLFKRPQGLYISLNE------------------------------KGRILEVL 162

Query: 182 KYWPKRTIQ*VI 217
           K WP+++IQ ++
Sbjct: 163 KTWPEKSIQVIV 174



 Score = 37.7 bits (86), Expect(2) = 4e-10
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +3

Query: 219 IGVTDGERILGLGDLGCQ 272
           I VTDGERILGLGDLGCQ
Sbjct: 173 IVVTDGERILGLGDLGCQ 190


>ref|NP_001105292.1| NADP malic enzyme4 [Zea mays] gi|57867869|gb|AAW57314.1|
           NADP-dependent malic enzyme [Zea mays]
          Length = 652

 Score = 50.8 bits (120), Expect(2) = 5e-10
 Identities = 29/72 (40%), Positives = 37/72 (51%)
 Frame = +2

Query: 2   EACQKYGSIFRHPQALYISLKERYAIFQLKCGMPSYLFTLLYT*S*DRLGYCRGKILEVL 181
           EACQKYGSIFR PQ LYISLKE                              +G+ILEVL
Sbjct: 206 EACQKYGSIFRRPQGLYISLKE------------------------------KGRILEVL 235

Query: 182 KYWPKRTIQ*VI 217
           + W +++IQ ++
Sbjct: 236 RNWTEKSIQVIV 247



 Score = 37.7 bits (86), Expect(2) = 5e-10
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +3

Query: 219 IGVTDGERILGLGDLGCQ 272
           I VTDGERILGLGDLGCQ
Sbjct: 246 IVVTDGERILGLGDLGCQ 263


>gb|AFW85113.1| malic enzyme Precursor [Zea mays]
          Length = 652

 Score = 50.8 bits (120), Expect(2) = 5e-10
 Identities = 29/72 (40%), Positives = 37/72 (51%)
 Frame = +2

Query: 2   EACQKYGSIFRHPQALYISLKERYAIFQLKCGMPSYLFTLLYT*S*DRLGYCRGKILEVL 181
           EACQKYGSIFR PQ LYISLKE                              +G+ILEVL
Sbjct: 206 EACQKYGSIFRRPQGLYISLKE------------------------------KGRILEVL 235

Query: 182 KYWPKRTIQ*VI 217
           + W +++IQ ++
Sbjct: 236 RNWTEKSIQVIV 247



 Score = 37.7 bits (86), Expect(2) = 5e-10
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +3

Query: 219 IGVTDGERILGLGDLGCQ 272
           I VTDGERILGLGDLGCQ
Sbjct: 246 IVVTDGERILGLGDLGCQ 263


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