BLASTX nr result

ID: Coptis24_contig00026577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026577
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    65   2e-21
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]         65   2e-21
gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japo...    63   3e-20
gb|ACK44480.1| hypothetical protein 2 [Triticum aestivum]              62   9e-20
gb|EEE57442.1| hypothetical protein OsJ_07651 [Oryza sativa Japo...    63   1e-19

>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 64.7 bits (156), Expect(2) = 2e-21
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = -3

Query: 492  KVLSQASRGVLVKTVAQSIPVYTMSTYHIPMKICDKLDQLARNFWWNGVKDQKAFYTAN* 313
            + LS A +  L+K+VAQ++P YTM  + +P + C++ +QL RNFWW   K +K  +    
Sbjct: 1034 RFLSLAGKEALIKSVAQALPTYTMGVFKMPERFCEEYEQLVRNFWWGHEKGEKKVHWIAW 1093

Query: 312  DKLCTPK 292
            +KL +PK
Sbjct: 1094 EKLTSPK 1100



 Score = 62.8 bits (151), Expect(2) = 2e-21
 Identities = 32/84 (38%), Positives = 48/84 (57%)
 Frame = -1

Query: 296  PKALGGMGFRKARFMNSAMLDKLSWKLLQNQESLWASFFKSTYSK*WKLKDVKNLPSECS 117
            PK LGG+GFR  R  N A+L + +W+L+++ +SL A   K+ Y     + D    PS  S
Sbjct: 1099 PKLLGGLGFRDIRCFNQALLARQAWRLIESPDSLCARVLKAKYYPNGTITDTA-FPSVSS 1157

Query: 116  YFWRGLCKNLKVVTDYSIWAIGDG 45
              W+G+   L+++    IW IGDG
Sbjct: 1158 PTWKGIVHGLELLKKGLIWRIGDG 1181


>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
          Length = 1205

 Score = 64.7 bits (156), Expect(2) = 2e-21
 Identities = 27/67 (40%), Positives = 43/67 (64%)
 Frame = -3

Query: 492 KVLSQASRGVLVKTVAQSIPVYTMSTYHIPMKICDKLDQLARNFWWNGVKDQKAFYTAN* 313
           + LS A +  L+K+VAQ++P YTM  + +P + C++ +QL RNFWW   K +K  +    
Sbjct: 770 RFLSLAGKEALIKSVAQALPTYTMGVFKMPERFCEEYEQLVRNFWWGHEKGEKKVHWIAW 829

Query: 312 DKLCTPK 292
           +KL +PK
Sbjct: 830 EKLTSPK 836



 Score = 62.8 bits (151), Expect(2) = 2e-21
 Identities = 32/84 (38%), Positives = 48/84 (57%)
 Frame = -1

Query: 296  PKALGGMGFRKARFMNSAMLDKLSWKLLQNQESLWASFFKSTYSK*WKLKDVKNLPSECS 117
            PK LGG+GFR  R  N A+L + +W+L+++ +SL A   K+ Y     + D    PS  S
Sbjct: 835  PKLLGGLGFRDIRCFNQALLARQAWRLIESPDSLCARVLKAKYYPNGTITDTA-FPSVSS 893

Query: 116  YFWRGLCKNLKVVTDYSIWAIGDG 45
              W+G+   L+++    IW IGDG
Sbjct: 894  PTWKGIVHGLELLKKGLIWRIGDG 917


>gb|EEE50691.1| hypothetical protein OsJ_30951 [Oryza sativa Japonica Group]
          Length = 697

 Score = 63.2 bits (152), Expect(2) = 3e-20
 Identities = 29/88 (32%), Positives = 52/88 (59%)
 Frame = -1

Query: 296 PKALGGMGFRKARFMNSAMLDKLSWKLLQNQESLWASFFKSTYSK*WKLKDVKNLPSECS 117
           PK+ GG+GFR     N AML +  W+L+QN +SL +   K+ Y     + D ++   + S
Sbjct: 368 PKSQGGLGFRDLHSFNIAMLARQGWRLIQNPDSLCSRLLKAKYFPNCNVLDAQS-RKQMS 426

Query: 116 YFWRGLCKNLKVVTDYSIWAIGDGKNVS 33
           Y WR + K ++++    IW +G+G++++
Sbjct: 427 YSWRSILKGIQLLRKGVIWRVGNGEHIN 454



 Score = 60.1 bits (144), Expect(2) = 3e-20
 Identities = 26/68 (38%), Positives = 40/68 (58%)
 Frame = -3

Query: 492 KVLSQASRGVLVKTVAQSIPVYTMSTYHIPMKICDKLDQLARNFWWNGVKDQKAFYTAN* 313
           K LS+A + +L+K VAQ+IP Y MS +++   +CD+L  +   FWW    + K  +    
Sbjct: 303 KFLSKAGKEILIKAVAQAIPTYAMSCFYLTKSLCDELTSMILRFWWAQHDNDKKIHWLGK 362

Query: 312 DKLCTPKS 289
           DK+  PKS
Sbjct: 363 DKIMKPKS 370


>gb|ACK44480.1| hypothetical protein 2 [Triticum aestivum]
          Length = 372

 Score = 62.4 bits (150), Expect(2) = 9e-20
 Identities = 31/89 (34%), Positives = 50/89 (56%)
 Frame = -1

Query: 302 VPPKALGGMGFRKARFMNSAMLDKLSWKLLQNQESLWASFFKSTYSK*WKLKDVKNLPSE 123
           + PKA GG+GFR  R  N A+L + +W+LL N +SL A   K+ Y    +L+D       
Sbjct: 62  IQPKARGGLGFRDYRIFNQALLARQAWRLLVNPDSLCARVLKAKYYPNGRLEDTV-FAGN 120

Query: 122 CSYFWRGLCKNLKVVTDYSIWAIGDGKNV 36
            S  W+ +   L+++    +W +G+G+NV
Sbjct: 121 ASSSWQAITYGLELLKKGLVWRVGNGQNV 149



 Score = 59.3 bits (142), Expect(2) = 9e-20
 Identities = 22/66 (33%), Positives = 40/66 (60%)
 Frame = -3

Query: 486 LSQASRGVLVKTVAQSIPVYTMSTYHIPMKICDKLDQLARNFWWNGVKDQKAFYTAN*DK 307
           ++QA +  L+K VA +IP Y M  + +P+ +CD L ++ RN+WW   K ++  +    +K
Sbjct: 1   MAQAGKETLIKAVAHAIPAYIMGVFKLPLSVCDDLTRMVRNYWWGSEKGKRKAHWMAWEK 60

Query: 306 LCTPKS 289
           +  PK+
Sbjct: 61  IIQPKA 66


>gb|EEE57442.1| hypothetical protein OsJ_07651 [Oryza sativa Japonica Group]
          Length = 946

 Score = 62.8 bits (151), Expect(2) = 1e-19
 Identities = 34/87 (39%), Positives = 49/87 (56%)
 Frame = -1

Query: 296 PKALGGMGFRKARFMNSAMLDKLSWKLLQNQESLWASFFKSTYSK*WKLKDVKNLPSECS 117
           PK  GG+GFR  R  N A+L + +W+L+Q+ ESL A   K+ Y     L D     S  S
Sbjct: 413 PKLCGGLGFRDYRLFNQALLARQAWRLIQSPESLCARVLKAKYYPNGSLVDT-CFASSAS 471

Query: 116 YFWRGLCKNLKVVTDYSIWAIGDGKNV 36
             WRG+   LK++    IW IG+G+++
Sbjct: 472 PGWRGIEYGLKLLKKGIIWRIGNGRSI 498



 Score = 58.5 bits (140), Expect(2) = 1e-19
 Identities = 25/65 (38%), Positives = 36/65 (55%)
 Frame = -3

Query: 486 LSQASRGVLVKTVAQSIPVYTMSTYHIPMKICDKLDQLARNFWWNGVKDQKAFYTAN*DK 307
           LS   + +L+K V Q+IP+Y M  + +P  +CD L  L RNFWW   K ++  +    D 
Sbjct: 350 LSVGGKEILIKAVIQAIPIYVMGLFKLPDSVCDDLTNLTRNFWWGAGKGERKTHWKAWDH 409

Query: 306 LCTPK 292
           L  PK
Sbjct: 410 LTRPK 414


Top