BLASTX nr result

ID: Coptis24_contig00026566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026566
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511640.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244...    83   2e-14
emb|CAN77635.1| hypothetical protein VITISV_002322 [Vitis vinifera]    83   2e-14
ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|1...    79   3e-13
ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>ref|XP_002511640.1| conserved hypothetical protein [Ricinus communis]
           gi|223548820|gb|EEF50309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/77 (63%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
 Frame = -1

Query: 260 CDWCLSKERNGKHV-SSKKSI-GKEVGA--RSSEYSHEKIKHNDREDINVEKGKNTSGAP 93
           CDWC S+ERN +H  SSKKS+ G ++G     SEYS +KIK +DRED   EKGK+ SGAP
Sbjct: 49  CDWCQSEERNARHGNSSKKSVTGHDIGGVTNRSEYSGDKIKQHDREDSTAEKGKSPSGAP 108

Query: 92  SPRQASRRYKSLKDVMC 42
           SPR A+RRYK LKDVMC
Sbjct: 109 SPRTATRRYKLLKDVMC 125


>ref|XP_002277033.1| PREDICTED: uncharacterized protein LOC100244418 [Vitis vinifera]
           gi|297734566|emb|CBI16617.3| unnamed protein product
           [Vitis vinifera]
          Length = 126

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
 Frame = -1

Query: 260 CDWCLSKERNGKH--VSSKKSIGK-EVGARS-SEYSHEKIKHNDREDINVEKGKNTSGAP 93
           CDWC ++ER+      SSKKS+G  E G  S SEYS +KIK +DRE+   EKGKN SGAP
Sbjct: 51  CDWCQTEERSATRHGSSSKKSVGGLEAGVTSRSEYSGDKIKQHDREESG-EKGKNPSGAP 109

Query: 92  SPRQASRRYKSLKDVMC 42
           SPR  +RRYK LKDVMC
Sbjct: 110 SPRPTTRRYKLLKDVMC 126


>emb|CAN77635.1| hypothetical protein VITISV_002322 [Vitis vinifera]
          Length = 151

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 4/77 (5%)
 Frame = -1

Query: 260 CDWCLSKERNGKH--VSSKKSIGK-EVGARS-SEYSHEKIKHNDREDINVEKGKNTSGAP 93
           CDWC ++ER+      SSKKS+G  E G  S SEYS +KIK +DRE+   EKGKN SGAP
Sbjct: 76  CDWCQTEERSATRHGSSSKKSVGGLEAGVTSRSEYSGDKIKQHDREESG-EKGKNPSGAP 134

Query: 92  SPRQASRRYKSLKDVMC 42
           SPR  +RRYK LKDVMC
Sbjct: 135 SPRPTTRRYKLLKDVMC 151


>ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|118487002|gb|ABK95332.1|
           unknown [Populus trichocarpa]
           gi|222835138|gb|EEE73573.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/83 (51%), Positives = 54/83 (65%), Gaps = 10/83 (12%)
 Frame = -1

Query: 260 CDWCLSKERNGKHVSSKKSIGKE-----VGARSSEYSHE-KIKHNDREDINV----EKGK 111
           CDWC S+ERN +H +S K  G E     +  + SEYS + KIK +DRE+ +     +KGK
Sbjct: 49  CDWCQSEERNARHGNSSKKSGAEHDSGTLVTKRSEYSGDHKIKQHDREENSTTSSDQKGK 108

Query: 110 NTSGAPSPRQASRRYKSLKDVMC 42
           N SG PSPR  +RRYK LKDVMC
Sbjct: 109 NPSGIPSPRPTTRRYKLLKDVMC 131


>ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|222844239|gb|EEE81786.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/83 (50%), Positives = 54/83 (65%), Gaps = 10/83 (12%)
 Frame = -1

Query: 260 CDWCLSKERNGKHVSSKKSIGKE-----VGARSSEYSHE-KIKHNDREDINV----EKGK 111
           CDWC S+ERN +H +S K  G       V  + SEY+ + KIK +DRE+ +     +KGK
Sbjct: 49  CDWCQSEERNARHGNSSKKSGAGHDGGIVVTKRSEYTGDHKIKQHDREENSTTSSDQKGK 108

Query: 110 NTSGAPSPRQASRRYKSLKDVMC 42
           N SG PSPR ++RRYK LKDVMC
Sbjct: 109 NPSGIPSPRPSTRRYKLLKDVMC 131


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