BLASTX nr result

ID: Coptis24_contig00026565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026565
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523358.1| Beclin-1, putative [Ricinus communis] gi|223...   100   2e-19
emb|CAJ27520.1| beclin 1 protein [Gossypium raimondii]                 99   5e-19
emb|CAJ27525.1| beclin 1 protein [Vitis vinifera]                      99   5e-19
ref|XP_002277370.1| PREDICTED: beclin 1 protein [Vitis vinifera]...    99   5e-19
ref|XP_002302626.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>ref|XP_002523358.1| Beclin-1, putative [Ricinus communis] gi|223537446|gb|EEF39074.1|
           Beclin-1, putative [Ricinus communis]
          Length = 523

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/62 (69%), Positives = 51/62 (82%)
 Frame = -2

Query: 188 LSDKGRSLSIDPNLPRWVCQNCRHALCVVGADSYADKFFNDSSSPLGMQGSSVHGAGSVL 9
           ++DK R+  +DPNLPRWVCQNCRH+LC+VG DSYADKF N+SSS   MQG S+HGA SVL
Sbjct: 7   MTDKSRTFPVDPNLPRWVCQNCRHSLCIVGVDSYADKFLNESSSRSAMQGFSMHGANSVL 66

Query: 8   AS 3
            S
Sbjct: 67  GS 68


>emb|CAJ27520.1| beclin 1 protein [Gossypium raimondii]
          Length = 511

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/65 (67%), Positives = 52/65 (80%)
 Frame = -2

Query: 197 KDDLSDKGRSLSIDPNLPRWVCQNCRHALCVVGADSYADKFFNDSSSPLGMQGSSVHGAG 18
           K+ + DKGRSL +DPNLP+W+CQNC H+LC+VG DSY DKF NDSS    MQGSS+HGA 
Sbjct: 3   KEYIPDKGRSLPVDPNLPKWICQNCHHSLCIVGVDSYVDKFPNDSSRS-AMQGSSIHGAS 61

Query: 17  SVLAS 3
           SVL S
Sbjct: 62  SVLGS 66


>emb|CAJ27525.1| beclin 1 protein [Vitis vinifera]
          Length = 479

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MKDDLSDKGRSLSIDPNLPRWVCQNCRHALCVVGADSYADKFFNDSSSPLGMQGSSVHGA 21
           M +D ++K R+  +DP LPRWVCQNCRH LC+VG DSYADKF++DSS   GMQGS +HGA
Sbjct: 1   MMEDSANKSRTFPVDPTLPRWVCQNCRHNLCIVGVDSYADKFYSDSSRS-GMQGSLIHGA 59

Query: 20  GSVLAS 3
           GSVL S
Sbjct: 60  GSVLGS 65


>ref|XP_002277370.1| PREDICTED: beclin 1 protein [Vitis vinifera]
           gi|297745431|emb|CBI40511.3| unnamed protein product
           [Vitis vinifera]
          Length = 522

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/66 (66%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MKDDLSDKGRSLSIDPNLPRWVCQNCRHALCVVGADSYADKFFNDSSSPLGMQGSSVHGA 21
           M +D ++K R+  +DP LPRWVCQNCRH LC+VG DSYADKF++DSS   GMQGS +HGA
Sbjct: 1   MMEDSANKSRTFPVDPTLPRWVCQNCRHNLCIVGVDSYADKFYSDSSRS-GMQGSLIHGA 59

Query: 20  GSVLAS 3
           GSVL S
Sbjct: 60  GSVLGS 65


>ref|XP_002302626.1| predicted protein [Populus trichocarpa] gi|222844352|gb|EEE81899.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = -2

Query: 197 KDDLSDKGRSLSIDPNLPRWVCQNCRHALCVVGADSYADKFFNDSSSPLGMQGSSVHGAG 18
           +D +SD+ ++   DPNLPRWVCQNCR+ LC+VG DS+ADKF NDSSS  GMQG SVHGA 
Sbjct: 4   EDPMSDRNQTFQADPNLPRWVCQNCRNPLCIVGVDSFADKFLNDSSSRSGMQGCSVHGAN 63

Query: 17  SVL 9
           S+L
Sbjct: 64  SIL 66


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