BLASTX nr result
ID: Coptis24_contig00026557
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026557 (834 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2... 344 2e-92 emb|CBI27289.3| unnamed protein product [Vitis vinifera] 327 2e-87 ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi... 327 2e-87 ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containi... 317 3e-84 ref|XP_002512079.1| pentatricopeptide repeat-containing protein,... 307 2e-81 >ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1| predicted protein [Populus trichocarpa] Length = 654 Score = 344 bits (882), Expect = 2e-92 Identities = 164/257 (63%), Positives = 208/257 (80%), Gaps = 2/257 (0%) Frame = +2 Query: 68 LKRQQFCTTPEIPTLYSFLQPSIFALKRNQPSQNPPKTL--QPIPKTLTPDQKTSFETTL 241 L+R+ F TTPEIP LYSFLQP+IFALK+ PS P T + PK LT D T+ E+TL Sbjct: 9 LRRRSFSTTPEIPNLYSFLQPTIFALKKTPPSTTNPATTTNRQTPKILTQDHITNLESTL 68 Query: 242 HNSIQTNDTDEAWKCFKILTSTSNYPSKNVSNSLIAHLSSLKDIHNLKRAFATVVFLLEK 421 H S+ TN+T+EAW FK LTS S +PSK+++NSLI HLSSL D NLKRAFA++V+++EK Sbjct: 69 HKSLITNNTNEAWASFKSLTSNSAFPSKSLTNSLITHLSSLNDTINLKRAFASIVYVIEK 128 Query: 422 NPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVWGGVLIDISRKNSNFV 601 NP L+++TV+ L SM ANTAAPAFAL+K MFKNRFF+PF +WG +LI+ISRKN + Sbjct: 129 NPKSLDFETVQLFLGSMVRANTAAPAFALIKCMFKNRFFMPFRLWGDILIEISRKNDKVI 188 Query: 602 AFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDAESVLETMSVLGVRPD 781 AFL+VF E+C+IA+ +KLDFMKPD++ACN ALEGCCCELES+S+AE V+ETMSVLG++PD Sbjct: 189 AFLKVFEESCRIAIDEKLDFMKPDMDACNVALEGCCCELESVSEAEKVIETMSVLGIKPD 248 Query: 782 EASFGFLAYLYSVKGVE 832 E SFGFLAYLY++KG + Sbjct: 249 ELSFGFLAYLYALKGFQ 265 >emb|CBI27289.3| unnamed protein product [Vitis vinifera] Length = 967 Score = 327 bits (839), Expect = 2e-87 Identities = 163/271 (60%), Positives = 215/271 (79%), Gaps = 3/271 (1%) Frame = +2 Query: 29 MWRRRRTLSSILYLKRQQFCTTPE--IPTLYSFLQPSIFALKRNQPSQNPPKTLQPI-PK 199 MWRR ++ + +++F +T E PTLYSFLQPS+F+LK P + P++ P PK Sbjct: 1 MWRRA---VAVRFAPQRRFSSTSESEFPTLYSFLQPSLFSLK---PIPSAPRSPHPTSPK 54 Query: 200 TLTPDQKTSFETTLHNSIQTNDTDEAWKCFKILTSTSNYPSKNVSNSLIAHLSSLKDIHN 379 L E+ LH S+ TN+TDEAWK FK LT+ S +PSK+++NSLIAHL+SL D++N Sbjct: 55 PLQSPAPEDLESALHTSLSTNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYN 114 Query: 380 LKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVWG 559 LKRAFA+ VFLLEKNPS+L++ TV TLL SM SANTAAPAFAL+ MFKNR+F+PFS+WG Sbjct: 115 LKRAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMWG 174 Query: 560 GVLIDISRKNSNFVAFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDAE 739 GV+++I+R+N +FVAFLRVFNE C+IA+ +KL+ MKPDL+ACN ALEGC +LES+S+AE Sbjct: 175 GVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEAE 234 Query: 740 SVLETMSVLGVRPDEASFGFLAYLYSVKGVE 832 V+E MSVLG++PDE+SFGFLAYLY++KG+E Sbjct: 235 KVVEMMSVLGIQPDESSFGFLAYLYALKGLE 265 >ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290 [Vitis vinifera] Length = 655 Score = 327 bits (839), Expect = 2e-87 Identities = 163/271 (60%), Positives = 215/271 (79%), Gaps = 3/271 (1%) Frame = +2 Query: 29 MWRRRRTLSSILYLKRQQFCTTPE--IPTLYSFLQPSIFALKRNQPSQNPPKTLQPI-PK 199 MWRR ++ + +++F +T E PTLYSFLQPS+F+LK P + P++ P PK Sbjct: 1 MWRRA---VAVRFAPQRRFSSTSESEFPTLYSFLQPSLFSLK---PIPSAPRSPHPTSPK 54 Query: 200 TLTPDQKTSFETTLHNSIQTNDTDEAWKCFKILTSTSNYPSKNVSNSLIAHLSSLKDIHN 379 L E+ LH S+ TN+TDEAWK FK LT+ S +PSK+++NSLIAHL+SL D++N Sbjct: 55 PLQSPAPEDLESALHTSLSTNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYN 114 Query: 380 LKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVWG 559 LKRAFA+ VFLLEKNPS+L++ TV TLL SM SANTAAPAFAL+ MFKNR+F+PFS+WG Sbjct: 115 LKRAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMWG 174 Query: 560 GVLIDISRKNSNFVAFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDAE 739 GV+++I+R+N +FVAFLRVFNE C+IA+ +KL+ MKPDL+ACN ALEGC +LES+S+AE Sbjct: 175 GVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEAE 234 Query: 740 SVLETMSVLGVRPDEASFGFLAYLYSVKGVE 832 V+E MSVLG++PDE+SFGFLAYLY++KG+E Sbjct: 235 KVVEMMSVLGIQPDESSFGFLAYLYALKGLE 265 >ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like [Cucumis sativus] gi|449517162|ref|XP_004165615.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like [Cucumis sativus] Length = 656 Score = 317 bits (811), Expect = 3e-84 Identities = 161/272 (59%), Positives = 208/272 (76%), Gaps = 4/272 (1%) Frame = +2 Query: 29 MWRRRRTLSSILYLKRQQFCTTPEIP-TLYSFLQPSIFALKRN--QPSQNPPKTLQ-PIP 196 MW+R L + + F + PE P +LYSFLQPS+FA KR PSQ+ Q P P Sbjct: 1 MWKRVLCL-----IPHRSFSSVPENPPSLYSFLQPSLFARKRTPFSPSQDSTDLRQDPTP 55 Query: 197 KTLTPDQKTSFETTLHNSIQTNDTDEAWKCFKILTSTSNYPSKNVSNSLIAHLSSLKDIH 376 + LTPD ET LH S+ T+DTDEAWK FK+LT +S +PSK+++NSLIAHLSS+ D+H Sbjct: 56 QNLTPDGVAVVETALHKSLLTSDTDEAWKSFKLLTRSSAFPSKSLTNSLIAHLSSIGDVH 115 Query: 377 NLKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVW 556 NLKRAFA+VVF++EK P +L++ +V+ LL SM ANTAAPA +L+K MFKNR F+PFSVW Sbjct: 116 NLKRAFASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVW 175 Query: 557 GGVLIDISRKNSNFVAFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDA 736 G L+DI R++ + + FLRVF ENC+IAL ++LDF+KPDL ACNAALEGCC ELES++DA Sbjct: 176 GKELVDICRQSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDA 235 Query: 737 ESVLETMSVLGVRPDEASFGFLAYLYSVKGVE 832 E V+ETMS+L +RPDE SFG LAYLY++KG++ Sbjct: 236 EKVIETMSLLYLRPDEVSFGALAYLYALKGLD 267 >ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223549259|gb|EEF50748.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 650 Score = 307 bits (786), Expect = 2e-81 Identities = 158/272 (58%), Positives = 211/272 (77%), Gaps = 4/272 (1%) Frame = +2 Query: 29 MWRRRRTLSSILYLKRQQFCTTPEIPTLYSFLQPSIFALKR---NQPSQNPPKTLQPIPK 199 MWRR+ +I +L + F T+ TLYSFLQP+IF LK+ + + PP TLQ Sbjct: 1 MWRRK----AINFLPNRTFSTS----TLYSFLQPTIFTLKKPTTDPTNTTPPPTLQ---- 48 Query: 200 TLTPDQKTSFETTLHNSIQTNDTDEAWKCFKILTSTSNY-PSKNVSNSLIAHLSSLKDIH 376 +L D + E+T+HNS+ TNDTD+AWK FK LTS S+Y PSK+++NSLI HLSSL+D Sbjct: 49 SLNLDHVATLESTIHNSLLTNDTDQAWKSFKFLTSNSSYFPSKSLANSLITHLSSLQDTL 108 Query: 377 NLKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVW 556 NLKRAFA+V+F +EKNP L+++TV+++L SM AN+AAPAFALVK MFK+R+F+PF +W Sbjct: 109 NLKRAFASVIFFMEKNPQSLDFETVQSVLESMKFANSAAPAFALVKCMFKHRYFMPFHLW 168 Query: 557 GGVLIDISRKNSNFVAFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDA 736 GG++ IS+KN FVAFL+VF E+ +IA+ +KLDFMKPDL ACN ALE CC E+ES+SDA Sbjct: 169 GGLIGHISKKNGMFVAFLKVFEESYRIAVDEKLDFMKPDLGACNLALECCCEEIESVSDA 228 Query: 737 ESVLETMSVLGVRPDEASFGFLAYLYSVKGVE 832 ++V+E MSVLG++PDE SFGFLAYLY++KG++ Sbjct: 229 DNVIEIMSVLGIKPDEMSFGFLAYLYALKGLQ 260