BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026557
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2...   344   2e-92
emb|CBI27289.3| unnamed protein product [Vitis vinifera]              327   2e-87
ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi...   327   2e-87
ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containi...   317   3e-84
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...   307   2e-81

>ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  344 bits (882), Expect = 2e-92
 Identities = 164/257 (63%), Positives = 208/257 (80%), Gaps = 2/257 (0%)
 Frame = +2

Query: 68  LKRQQFCTTPEIPTLYSFLQPSIFALKRNQPSQNPPKTL--QPIPKTLTPDQKTSFETTL 241
           L+R+ F TTPEIP LYSFLQP+IFALK+  PS   P T   +  PK LT D  T+ E+TL
Sbjct: 9   LRRRSFSTTPEIPNLYSFLQPTIFALKKTPPSTTNPATTTNRQTPKILTQDHITNLESTL 68

Query: 242 HNSIQTNDTDEAWKCFKILTSTSNYPSKNVSNSLIAHLSSLKDIHNLKRAFATVVFLLEK 421
           H S+ TN+T+EAW  FK LTS S +PSK+++NSLI HLSSL D  NLKRAFA++V+++EK
Sbjct: 69  HKSLITNNTNEAWASFKSLTSNSAFPSKSLTNSLITHLSSLNDTINLKRAFASIVYVIEK 128

Query: 422 NPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVWGGVLIDISRKNSNFV 601
           NP  L+++TV+  L SM  ANTAAPAFAL+K MFKNRFF+PF +WG +LI+ISRKN   +
Sbjct: 129 NPKSLDFETVQLFLGSMVRANTAAPAFALIKCMFKNRFFMPFRLWGDILIEISRKNDKVI 188

Query: 602 AFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDAESVLETMSVLGVRPD 781
           AFL+VF E+C+IA+ +KLDFMKPD++ACN ALEGCCCELES+S+AE V+ETMSVLG++PD
Sbjct: 189 AFLKVFEESCRIAIDEKLDFMKPDMDACNVALEGCCCELESVSEAEKVIETMSVLGIKPD 248

Query: 782 EASFGFLAYLYSVKGVE 832
           E SFGFLAYLY++KG +
Sbjct: 249 ELSFGFLAYLYALKGFQ 265


>emb|CBI27289.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  327 bits (839), Expect = 2e-87
 Identities = 163/271 (60%), Positives = 215/271 (79%), Gaps = 3/271 (1%)
 Frame = +2

Query: 29  MWRRRRTLSSILYLKRQQFCTTPE--IPTLYSFLQPSIFALKRNQPSQNPPKTLQPI-PK 199
           MWRR     ++ +  +++F +T E   PTLYSFLQPS+F+LK   P  + P++  P  PK
Sbjct: 1   MWRRA---VAVRFAPQRRFSSTSESEFPTLYSFLQPSLFSLK---PIPSAPRSPHPTSPK 54

Query: 200 TLTPDQKTSFETTLHNSIQTNDTDEAWKCFKILTSTSNYPSKNVSNSLIAHLSSLKDIHN 379
            L        E+ LH S+ TN+TDEAWK FK LT+ S +PSK+++NSLIAHL+SL D++N
Sbjct: 55  PLQSPAPEDLESALHTSLSTNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYN 114

Query: 380 LKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVWG 559
           LKRAFA+ VFLLEKNPS+L++ TV TLL SM SANTAAPAFAL+  MFKNR+F+PFS+WG
Sbjct: 115 LKRAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMWG 174

Query: 560 GVLIDISRKNSNFVAFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDAE 739
           GV+++I+R+N +FVAFLRVFNE C+IA+ +KL+ MKPDL+ACN ALEGC  +LES+S+AE
Sbjct: 175 GVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEAE 234

Query: 740 SVLETMSVLGVRPDEASFGFLAYLYSVKGVE 832
            V+E MSVLG++PDE+SFGFLAYLY++KG+E
Sbjct: 235 KVVEMMSVLGIQPDESSFGFLAYLYALKGLE 265


>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
           [Vitis vinifera]
          Length = 655

 Score =  327 bits (839), Expect = 2e-87
 Identities = 163/271 (60%), Positives = 215/271 (79%), Gaps = 3/271 (1%)
 Frame = +2

Query: 29  MWRRRRTLSSILYLKRQQFCTTPE--IPTLYSFLQPSIFALKRNQPSQNPPKTLQPI-PK 199
           MWRR     ++ +  +++F +T E   PTLYSFLQPS+F+LK   P  + P++  P  PK
Sbjct: 1   MWRRA---VAVRFAPQRRFSSTSESEFPTLYSFLQPSLFSLK---PIPSAPRSPHPTSPK 54

Query: 200 TLTPDQKTSFETTLHNSIQTNDTDEAWKCFKILTSTSNYPSKNVSNSLIAHLSSLKDIHN 379
            L        E+ LH S+ TN+TDEAWK FK LT+ S +PSK+++NSLIAHL+SL D++N
Sbjct: 55  PLQSPAPEDLESALHTSLSTNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYN 114

Query: 380 LKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVWG 559
           LKRAFA+ VFLLEKNPS+L++ TV TLL SM SANTAAPAFAL+  MFKNR+F+PFS+WG
Sbjct: 115 LKRAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMWG 174

Query: 560 GVLIDISRKNSNFVAFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDAE 739
           GV+++I+R+N +FVAFLRVFNE C+IA+ +KL+ MKPDL+ACN ALEGC  +LES+S+AE
Sbjct: 175 GVIVEITRRNRSFVAFLRVFNETCRIAIDEKLESMKPDLDACNVALEGCSQDLESVSEAE 234

Query: 740 SVLETMSVLGVRPDEASFGFLAYLYSVKGVE 832
            V+E MSVLG++PDE+SFGFLAYLY++KG+E
Sbjct: 235 KVVEMMSVLGIQPDESSFGFLAYLYALKGLE 265


>ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g69290-like [Cucumis sativus]
           gi|449517162|ref|XP_004165615.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g69290-like [Cucumis sativus]
          Length = 656

 Score =  317 bits (811), Expect = 3e-84
 Identities = 161/272 (59%), Positives = 208/272 (76%), Gaps = 4/272 (1%)
 Frame = +2

Query: 29  MWRRRRTLSSILYLKRQQFCTTPEIP-TLYSFLQPSIFALKRN--QPSQNPPKTLQ-PIP 196
           MW+R   L     +  + F + PE P +LYSFLQPS+FA KR    PSQ+     Q P P
Sbjct: 1   MWKRVLCL-----IPHRSFSSVPENPPSLYSFLQPSLFARKRTPFSPSQDSTDLRQDPTP 55

Query: 197 KTLTPDQKTSFETTLHNSIQTNDTDEAWKCFKILTSTSNYPSKNVSNSLIAHLSSLKDIH 376
           + LTPD     ET LH S+ T+DTDEAWK FK+LT +S +PSK+++NSLIAHLSS+ D+H
Sbjct: 56  QNLTPDGVAVVETALHKSLLTSDTDEAWKSFKLLTRSSAFPSKSLTNSLIAHLSSIGDVH 115

Query: 377 NLKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVW 556
           NLKRAFA+VVF++EK P +L++ +V+ LL SM  ANTAAPA +L+K MFKNR F+PFSVW
Sbjct: 116 NLKRAFASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVW 175

Query: 557 GGVLIDISRKNSNFVAFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDA 736
           G  L+DI R++ + + FLRVF ENC+IAL ++LDF+KPDL ACNAALEGCC ELES++DA
Sbjct: 176 GKELVDICRQSGSLIPFLRVFEENCRIALDERLDFLKPDLIACNAALEGCCHELESVTDA 235

Query: 737 ESVLETMSVLGVRPDEASFGFLAYLYSVKGVE 832
           E V+ETMS+L +RPDE SFG LAYLY++KG++
Sbjct: 236 EKVIETMSLLYLRPDEVSFGALAYLYALKGLD 267


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score =  307 bits (786), Expect = 2e-81
 Identities = 158/272 (58%), Positives = 211/272 (77%), Gaps = 4/272 (1%)
 Frame = +2

Query: 29  MWRRRRTLSSILYLKRQQFCTTPEIPTLYSFLQPSIFALKR---NQPSQNPPKTLQPIPK 199
           MWRR+    +I +L  + F T+    TLYSFLQP+IF LK+   +  +  PP TLQ    
Sbjct: 1   MWRRK----AINFLPNRTFSTS----TLYSFLQPTIFTLKKPTTDPTNTTPPPTLQ---- 48

Query: 200 TLTPDQKTSFETTLHNSIQTNDTDEAWKCFKILTSTSNY-PSKNVSNSLIAHLSSLKDIH 376
           +L  D   + E+T+HNS+ TNDTD+AWK FK LTS S+Y PSK+++NSLI HLSSL+D  
Sbjct: 49  SLNLDHVATLESTIHNSLLTNDTDQAWKSFKFLTSNSSYFPSKSLANSLITHLSSLQDTL 108

Query: 377 NLKRAFATVVFLLEKNPSVLEYKTVETLLCSMCSANTAAPAFALVKSMFKNRFFLPFSVW 556
           NLKRAFA+V+F +EKNP  L+++TV+++L SM  AN+AAPAFALVK MFK+R+F+PF +W
Sbjct: 109 NLKRAFASVIFFMEKNPQSLDFETVQSVLESMKFANSAAPAFALVKCMFKHRYFMPFHLW 168

Query: 557 GGVLIDISRKNSNFVAFLRVFNENCKIALGDKLDFMKPDLNACNAALEGCCCELESISDA 736
           GG++  IS+KN  FVAFL+VF E+ +IA+ +KLDFMKPDL ACN ALE CC E+ES+SDA
Sbjct: 169 GGLIGHISKKNGMFVAFLKVFEESYRIAVDEKLDFMKPDLGACNLALECCCEEIESVSDA 228

Query: 737 ESVLETMSVLGVRPDEASFGFLAYLYSVKGVE 832
           ++V+E MSVLG++PDE SFGFLAYLY++KG++
Sbjct: 229 DNVIEIMSVLGIKPDEMSFGFLAYLYALKGLQ 260