BLASTX nr result
ID: Coptis24_contig00026554
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026554 (208 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulga... 58 7e-07 ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 55 5e-06 ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 55 8e-06 >ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris] gi|323435090|ref|YP_004222308.1| hypothetical protein BevumaM_p073 [Beta vulgaris subsp. maritima] gi|346683181|ref|YP_004842113.1| hypothetical protein BemaM_p068 [Beta macrocarpa] gi|9049281|dbj|BAA99291.1| orf315 [Beta vulgaris subsp. vulgaris] gi|319439823|emb|CBJ17535.1| hypothetical protein [Beta vulgaris subsp. maritima] gi|345500099|emb|CBX24917.1| hypothetical protein [Beta macrocarpa] Length = 315 Score = 58.2 bits (139), Expect = 7e-07 Identities = 25/61 (40%), Positives = 33/61 (54%) Frame = -1 Query: 199 FITWLALNEGLKTLSKLREWKVVHSDLCVLCWRGKEIEKHLFFHCTYSQFVWKKLLQSAG 20 FITWL + L T ++ W + +CVLC +G E +HLFF C YSQ VW G Sbjct: 38 FITWLGIQNRLYTKDRMANWNLACDPVCVLCGQGAESAQHLFFACEYSQQVWGLFFTLRG 97 Query: 19 Y 17 + Sbjct: 98 F 98 >ref|XP_002299084.1| predicted protein [Populus trichocarpa] gi|222846342|gb|EEE83889.1| predicted protein [Populus trichocarpa] Length = 949 Score = 56.2 bits (134), Expect = 3e-06 Identities = 23/55 (41%), Positives = 32/55 (58%) Frame = -1 Query: 208 RHSFITWLALNEGLKTLSKLREWKVVHSDLCVLCWRGKEIEKHLFFHCTYSQFVW 44 R +FI W+A + L T+ +L + ++ S CVLC E HLFF CTYS +W Sbjct: 794 RQAFILWIASMDRLHTMDRLTSFGIIPSSTCVLCGMHNETHDHLFFQCTYSSILW 848 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 55.5 bits (132), Expect = 5e-06 Identities = 22/55 (40%), Positives = 33/55 (60%) Frame = -1 Query: 208 RHSFITWLALNEGLKTLSKLREWKVVHSDLCVLCWRGKEIEKHLFFHCTYSQFVW 44 RHSF+ W+A+ + L T KL + + + C LC R E HLFF C+Y++ +W Sbjct: 354 RHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIW 408 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 54.7 bits (130), Expect = 8e-06 Identities = 22/55 (40%), Positives = 33/55 (60%) Frame = -1 Query: 208 RHSFITWLALNEGLKTLSKLREWKVVHSDLCVLCWRGKEIEKHLFFHCTYSQFVW 44 RHSF+ W+A+ + L T KL + + + C LC R E HLFF C+Y++ +W Sbjct: 1227 RHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCLRNNEDHNHLFFECSYTKAIW 1281