BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026553
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       153   2e-35
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  146   2e-33
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   145   6e-33
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   141   7e-32
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   139   3e-31

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  153 bits (387), Expect = 2e-35
 Identities = 84/196 (42%), Positives = 112/196 (57%)
 Frame = -1

Query: 589  LRFPLKLIRWISLCYSTAHFSILVNGTPEGFFKGKRGLRQGDPLSPYLFVLVMEILTCLP 410
            L  P K I WIS C ST  F++ +NG   GFFK  +GLRQGDPLSPYLFVL ME  + L 
Sbjct: 613  LAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLL 672

Query: 409  MTKFNEGLIKPHPKCKKTKVXXXXXXXXXXXXXXXDIQSMSAVKHVLESFAAATGLKANS 230
             +++  GLI  HPK     +                  S+  +   L+ FA+ +GLK N 
Sbjct: 673  HSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNK 732

Query: 229  LKTTLLTGGMNEGESKHLADYMGVTLTELPVTYLGLQLTSTRLGIKDCYPLVEKITCRIQ 50
             K+ L   G+N+ ES   A Y G  +  LP+ YLGL L + +L I +  PL+EKIT R +
Sbjct: 733  DKSHLYLAGLNQLESNANAAY-GFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFR 791

Query: 49   NWKNQCLSHAGRLELI 2
            +W N+CLS AGR++LI
Sbjct: 792  SWVNKCLSFAGRIQLI 807


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  146 bits (369), Expect = 2e-33
 Identities = 74/196 (37%), Positives = 112/196 (57%)
 Frame = -1

Query: 589 LRFPLKLIRWISLCYSTAHFSILVNGTPEGFFKGKRGLRQGDPLSPYLFVLVMEILTCLP 410
           L  P   + W+ +C  T  FS+ +NG   G+FKG+RGLRQGDPLSPYLF++ ME+L+ + 
Sbjct: 66  LNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRML 125

Query: 409 MTKFNEGLIKPHPKCKKTKVXXXXXXXXXXXXXXXDIQSMSAVKHVLESFAAATGLKANS 230
                E  +  HPKC    +               + +S+  VK+ L+SF+ A+GL  N+
Sbjct: 126 DRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNT 185

Query: 229 LKTTLLTGGMNEGESKHLADYMGVTLTELPVTYLGLQLTSTRLGIKDCYPLVEKITCRIQ 50
            KT +   G+N  E+  L   +G T   LPV YLG+ L+  RL   D  PL++++  +I 
Sbjct: 186 EKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKIN 245

Query: 49  NWKNQCLSHAGRLELI 2
           +W  + LS+AGRL+L+
Sbjct: 246 SWTTRYLSYAGRLQLV 261


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  145 bits (365), Expect = 6e-33
 Identities = 80/196 (40%), Positives = 109/196 (55%)
 Frame = -1

Query: 589  LRFPLKLIRWISLCYSTAHFSILVNGTPEGFFKGKRGLRQGDPLSPYLFVLVMEILTCLP 410
            L  P K   WI  C STA FS+++NG   G F   +GLRQGDP+SPYLFVL ME+ + L 
Sbjct: 510  LNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLL 569

Query: 409  MTKFNEGLIKPHPKCKKTKVXXXXXXXXXXXXXXXDIQSMSAVKHVLESFAAATGLKANS 230
             +++  G I  HPK  + ++                  S+  +   LE FA  +GL  N+
Sbjct: 570  QSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNT 629

Query: 229  LKTTLLTGGMNEGESKHLADYMGVTLTELPVTYLGLQLTSTRLGIKDCYPLVEKITCRIQ 50
             KT L   G+++ ES  +A Y G  L  LPV YLGL L S +L I +  PL+EKIT R  
Sbjct: 630  NKTQLYHAGLSQSESDSMASY-GFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFN 688

Query: 49   NWKNQCLSHAGRLELI 2
            +W  + LS AGR++L+
Sbjct: 689  SWVVRLLSFAGRVQLL 704


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  141 bits (356), Expect = 7e-32
 Identities = 77/196 (39%), Positives = 108/196 (55%)
 Frame = -1

Query: 589  LRFPLKLIRWISLCYSTAHFSILVNGTPEGFFKGKRGLRQGDPLSPYLFVLVMEILTCLP 410
            L FP   IRWI  C  T  +SIL+NG P   F  ++GLRQGDPLSP+LF L ME L+   
Sbjct: 607  LGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCM 666

Query: 409  MTKFNEGLIKPHPKCKKTKVXXXXXXXXXXXXXXXDIQSMSAVKHVLESFAAATGLKANS 230
                 +     HPKC++ K+               D  S+S +     SF+ A+GL+A+ 
Sbjct: 667  GNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASI 726

Query: 229  LKTTLLTGGMNEGESKHLADYMGVTLTELPVTYLGLQLTSTRLGIKDCYPLVEKITCRIQ 50
             K+ +  GG+   E++ LAD + + +  LP  YLG+ L S +L    C PL++KIT R Q
Sbjct: 727  EKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQ 786

Query: 49   NWKNQCLSHAGRLELI 2
             W    LS+AGRL+L+
Sbjct: 787  GWVAHLLSYAGRLQLV 802


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  139 bits (351), Expect = 3e-31
 Identities = 78/195 (40%), Positives = 112/195 (57%), Gaps = 1/195 (0%)
 Frame = -1

Query: 583  FPLKLIRWISLCYSTAHFSILVNGTPEGFFKGKRGLRQGDPLSPYLFVLVMEILT-CLPM 407
            FP + + WI  C ST  +S+LVNG P   F+ ++GLRQGDP+SP+LF L ME L+ CL  
Sbjct: 606  FPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEE 665

Query: 406  TKFNEGLIKPHPKCKKTKVXXXXXXXXXXXXXXXDIQSMSAVKHVLESFAAATGLKANSL 227
             K +      HPKC++  +               D  S+  +    + F+ A+GL A+  
Sbjct: 666  LKGSPDF-NFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHE 724

Query: 226  KTTLLTGGMNEGESKHLADYMGVTLTELPVTYLGLQLTSTRLGIKDCYPLVEKITCRIQN 47
            K+ +   G+++  ++ LADY+ + L ELP  YLG+ LTS +L    C PLVE IT R Q 
Sbjct: 725  KSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQT 784

Query: 46   WKNQCLSHAGRLELI 2
            W  + LS+AGRL+LI
Sbjct: 785  WMAKLLSYAGRLQLI 799