BLASTX nr result

ID: Coptis24_contig00026549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026549
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262758.1| PREDICTED: uncharacterized protein LOC100257...   329   3e-88
emb|CAN83078.1| hypothetical protein VITISV_035882 [Vitis vinifera]   328   5e-88
dbj|BAJ34456.1| unnamed protein product [Thellungiella halophila]     309   3e-82
gb|AAM64360.1| unknown [Arabidopsis thaliana]                         304   1e-80
gb|ABK24728.1| unknown [Picea sitchensis]                             304   1e-80

>ref|XP_002262758.1| PREDICTED: uncharacterized protein LOC100257058 isoform 1 [Vitis
           vinifera]
          Length = 305

 Score =  329 bits (844), Expect = 3e-88
 Identities = 164/226 (72%), Positives = 190/226 (84%), Gaps = 13/226 (5%)
 Frame = -1

Query: 730 SGDWLLKPAGVDWLRSVNKLDNILARGDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRD 551
           SGDWLLKPAG DWLRS +KLDN+LAR DNR+ ++L KA  L ++ K FIFAVN+QVPGR+
Sbjct: 69  SGDWLLKPAGFDWLRSTSKLDNVLARPDNRVAHALRKAQSLNRSQKAFIFAVNIQVPGRE 128

Query: 550 NHSAVFYYSTDEPIPVDSLFYRFIHGDDNFRNQRFKIVNRIVKGPWMVKAAVGNHAACLL 371
           +HSAVFY++T++PIP  SLFYRFIHGDD FRNQRFKIVNRIVKGPW+VKAAVGN+AACLL
Sbjct: 129 HHSAVFYFATEDPIPPGSLFYRFIHGDDAFRNQRFKIVNRIVKGPWIVKAAVGNYAACLL 188

Query: 370 GKALTCNYYRGDNYLEIDVDIGSSTIASAILHLALKYVTAVSIDMGFLVEAVNEEELPER 191
           GKALTC+Y+RG NYLEIDVDIGSS IA+AIL LAL YVTAV+IDMGFLVEA  EEELPE+
Sbjct: 189 GKALTCSYHRGSNYLEIDVDIGSSAIANAILRLALGYVTAVNIDMGFLVEAQAEEELPEK 248

Query: 190 LLGAVRIAHMEMTSAFFVEST-------------AARGLGLSKVNH 92
           LLGAVR+  MEM+SA FVE++             + RGLGLSKVNH
Sbjct: 249 LLGAVRVCQMEMSSATFVEASPSPENATGPVAAVSKRGLGLSKVNH 294


>emb|CAN83078.1| hypothetical protein VITISV_035882 [Vitis vinifera]
          Length = 305

 Score =  328 bits (842), Expect = 5e-88
 Identities = 163/226 (72%), Positives = 190/226 (84%), Gaps = 13/226 (5%)
 Frame = -1

Query: 730 SGDWLLKPAGVDWLRSVNKLDNILARGDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRD 551
           SGDWLLKPAG DWLRS +KLDN+LAR DNR+ ++L KA  L ++ K FIFAVN+QVPGR+
Sbjct: 69  SGDWLLKPAGFDWLRSTSKLDNVLARPDNRVAHALRKAQSLNRSQKAFIFAVNIQVPGRE 128

Query: 550 NHSAVFYYSTDEPIPVDSLFYRFIHGDDNFRNQRFKIVNRIVKGPWMVKAAVGNHAACLL 371
           +HSAVFY++T++PIP  SLFYRFIHGDD FRNQRFKIVNRIVKGPW+VKAAVGN+AACLL
Sbjct: 129 HHSAVFYFATEDPIPPGSLFYRFIHGDDAFRNQRFKIVNRIVKGPWIVKAAVGNYAACLL 188

Query: 370 GKALTCNYYRGDNYLEIDVDIGSSTIASAILHLALKYVTAVSIDMGFLVEAVNEEELPER 191
           GKALTC+Y+RG NYLEI+VDIGSS IA+AIL LAL YVTAV+IDMGFLVEA  EEELPE+
Sbjct: 189 GKALTCSYHRGSNYLEIBVDIGSSAIANAILRLALGYVTAVNIDMGFLVEAQAEEELPEK 248

Query: 190 LLGAVRIAHMEMTSAFFVEST-------------AARGLGLSKVNH 92
           LLGAVR+  MEM+SA FVE++             + RGLGLSKVNH
Sbjct: 249 LLGAVRVCQMEMSSATFVEASPSPENATGPVAAVSKRGLGLSKVNH 294


>dbj|BAJ34456.1| unnamed protein product [Thellungiella halophila]
          Length = 301

 Score =  309 bits (792), Expect = 3e-82
 Identities = 152/221 (68%), Positives = 184/221 (83%), Gaps = 8/221 (3%)
 Frame = -1

Query: 730 SGDWLLKPAGVDWLRSVNKLDNILARGDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRD 551
           +GD+LL PAG+DWL+S  KLDN+LAR DNR+ ++L KAH  G++LK+FIFAVNLQ+PG+D
Sbjct: 76  AGDYLLSPAGMDWLKSSAKLDNVLARPDNRVAHALRKAHSRGQSLKSFIFAVNLQIPGKD 135

Query: 550 NHSAVFYYSTDEPIPVDSLFYRFIHGDDNFRNQRFKIVNRIVKGPWMVKAAVGNHAACLL 371
           +HSAVFY++T+EPIP  SL +RFI+GDD+FRNQRFKIVNRIVKGPW+VKAAVGN++ACLL
Sbjct: 136 HHSAVFYFATEEPIPSGSLLHRFINGDDSFRNQRFKIVNRIVKGPWVVKAAVGNYSACLL 195

Query: 370 GKALTCNYYRGDNYLEIDVDIGSSTIASAILHLALKYVTAVSIDMGFLVEAVNEEELPER 191
           GKALTCNY+RG NY EIDVDI SS IA+AIL LAL YVT+V+IDMGFL EA  EEELPER
Sbjct: 196 GKALTCNYHRGPNYFEIDVDISSSAIATAILRLALGYVTSVTIDMGFLAEAQTEEELPER 255

Query: 190 LLGAVRIAHMEMTSAFFVE--------STAARGLGLSKVNH 92
           L+GAVR+  MEM+SAF V+        S   R L  +KVNH
Sbjct: 256 LIGAVRVCQMEMSSAFVVDAPPPQQPPSQPCRTLSSAKVNH 296


>gb|AAM64360.1| unknown [Arabidopsis thaliana]
          Length = 302

 Score =  304 bits (779), Expect = 1e-80
 Identities = 150/221 (67%), Positives = 182/221 (82%), Gaps = 8/221 (3%)
 Frame = -1

Query: 730 SGDWLLKPAGVDWLRSVNKLDNILARGDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRD 551
           +GD+LL PAG+DWL+S  KL+N+LAR DNR+ ++L KA   G++LK+FIFAVNLQ+PG+D
Sbjct: 77  AGDYLLSPAGMDWLKSSTKLENVLARPDNRVAHALRKAQSRGQSLKSFIFAVNLQIPGKD 136

Query: 550 NHSAVFYYSTDEPIPVDSLFYRFIHGDDNFRNQRFKIVNRIVKGPWMVKAAVGNHAACLL 371
           +HSAVFY++T+EPIP  SL +RFI+GDD FRNQRFKIVNRIVKGPW+VKAAVGN++ACLL
Sbjct: 137 HHSAVFYFATEEPIPSGSLLHRFINGDDAFRNQRFKIVNRIVKGPWVVKAAVGNYSACLL 196

Query: 370 GKALTCNYYRGDNYLEIDVDIGSSTIASAILHLALKYVTAVSIDMGFLVEAVNEEELPER 191
           GKALTCNY+RG NY EIDVDI SS IA+AIL LAL YVT+V+IDMGFL EA  EEELPER
Sbjct: 197 GKALTCNYHRGPNYFEIDVDISSSAIATAILRLALGYVTSVTIDMGFLAEAQTEEELPER 256

Query: 190 LLGAVRIAHMEMTSAFFVE--------STAARGLGLSKVNH 92
           L+GAVR+  MEM+SAF V+        S   R L  +KVNH
Sbjct: 257 LIGAVRVCQMEMSSAFVVDAPPPQQLPSQPCRTLSSAKVNH 297


>gb|ABK24728.1| unknown [Picea sitchensis]
          Length = 320

 Score =  304 bits (778), Expect = 1e-80
 Identities = 146/203 (71%), Positives = 175/203 (86%)
 Frame = -1

Query: 730 SGDWLLKPAGVDWLRSVNKLDNILARGDNRIQNSLNKAHKLGKNLKTFIFAVNLQVPGRD 551
           +GDWLLKP G+DWL++ +KLD++L R DNR+  +L+KA+  GK LKTF+FAVNLQVPGR+
Sbjct: 63  AGDWLLKPLGMDWLKAGSKLDHVLGRPDNRVMAALSKANSDGKGLKTFVFAVNLQVPGRE 122

Query: 550 NHSAVFYYSTDEPIPVDSLFYRFIHGDDNFRNQRFKIVNRIVKGPWMVKAAVGNHAACLL 371
            HSAVFYY+TD+PIPV SLFYRFIH DD+FRN RFKIVNRIVKGPW+VK AVGN+AACLL
Sbjct: 123 PHSAVFYYATDDPIPVGSLFYRFIHEDDHFRNSRFKIVNRIVKGPWIVKTAVGNYAACLL 182

Query: 370 GKALTCNYYRGDNYLEIDVDIGSSTIASAILHLALKYVTAVSIDMGFLVEAVNEEELPER 191
           GKAL CNY +G NYLEIDVDIGSS +ASAILHLAL YV +V++DMGFLVE+  EEELPER
Sbjct: 183 GKALRCNYIKGSNYLEIDVDIGSSALASAILHLALGYVNSVTVDMGFLVESQAEEELPER 242

Query: 190 LLGAVRIAHMEMTSAFFVESTAA 122
           LLGAVR++ M+M SA  ++  AA
Sbjct: 243 LLGAVRVSQMQMGSAARLDVVAA 265


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