BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026542
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...    97   3e-18
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]    94   4e-17
ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arab...    91   3e-16
gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]              90   5e-16
ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabido...    90   5e-16

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 54/120 (45%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
 Frame = -3

Query: 836  CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKDKA---PV 666
            CVF  ++CPFC+  +  LG+++MA +A N+ LLNKIL YFD +EIK+ EAS DK    P 
Sbjct: 1130 CVFNTIYCPFCSTPNNCLGVQIMATNASNVDLLNKILFYFDRLEIKNPEASTDKGIKNPE 1189

Query: 665  PGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSY--SPDQQNDEGWRITKSKLRL 492
               + DL             +G +S +V+ L P EKFSY     QQN  GWR TKSK R+
Sbjct: 1190 SSEDKDLSP----------PSGSNSDEVSELDPFEKFSYKHQEPQQNSNGWRTTKSKNRI 1239


>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
          Length = 1261

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
 Frame = -3

Query: 836  CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKDKA---PV 666
            CVF  ++CPFC+  +  LG+++MA +A N+ LLNKIL YFD +EIK+ EAS DK    P 
Sbjct: 1092 CVFNTIYCPFCSTPNNCLGVQIMATNASNVELLNKILFYFDRLEIKNPEASTDKGIKNPE 1151

Query: 665  PGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSY--SPDQQNDEGWRITKSKL 498
               + DL             +G +S +V+ L P EK SY     QQN  GWR TKSK+
Sbjct: 1152 SSEDKDLSP----------PSGSNSDEVSELDPFEKXSYKHQEPQQNSNGWRTTKSKV 1199


>ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
            lyrata] gi|297338969|gb|EFH69386.1| hypothetical protein
            ARALYDRAFT_889526 [Arabidopsis lyrata subsp. lyrata]
          Length = 1171

 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
 Frame = -3

Query: 836  CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKD-----KA 672
            CVF  + CPFC+  +  LG++VMA D+ N+  L+KIL + DH+E+ +  ASKD     K 
Sbjct: 1058 CVFNTISCPFCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEVTNEAASKDSTLKHKE 1117

Query: 671  PVPGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSYSPDQQNDE-GWRITKSKLR 495
            P+   N+    AV  S+              V   IE+F+YSP+QQ D  GWR TKSKLR
Sbjct: 1118 PLAETNA----AVDKSD--------------VFKSIERFAYSPNQQQDSGGWRTTKSKLR 1159

Query: 494  LQKRGLLTQQ 465
            L KR L T Q
Sbjct: 1160 LPKRNLPTSQ 1169


>gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]
          Length = 1273

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
 Frame = -3

Query: 836  CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKD-----KA 672
            CVF  ++CPFC+  +  LG++VMA D+ N+  L+KIL + DH+E+ +  ASKD     K 
Sbjct: 1160 CVFNTIYCPFCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEVTNEAASKDSTLKHKE 1219

Query: 671  PVPGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSYSPDQQNDE-GWRITKSKLR 495
            P+   N+    AV  S+              VL  I++F+YSP+QQ +  GWR TKSKLR
Sbjct: 1220 PLAETNA----AVDKSD--------------VLKSIDRFAYSPNQQQESGGWRTTKSKLR 1261

Query: 494  LQKRGLLTQQ 465
            L KR L T +
Sbjct: 1262 LPKRNLPTSK 1271


>ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
            gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding
            helicase protein [Arabidopsis thaliana]
          Length = 1175

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
 Frame = -3

Query: 836  CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKD-----KA 672
            CVF  ++CPFC+  +  LG++VMA D+ N+  L+KIL + DH+E+ +  ASKD     K 
Sbjct: 1062 CVFNTIYCPFCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEVTNEAASKDSTLKHKE 1121

Query: 671  PVPGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSYSPDQQNDE-GWRITKSKLR 495
            P+   N+    AV  S+              VL  I++F+YSP+QQ +  GWR TKSKLR
Sbjct: 1122 PLAETNA----AVDKSD--------------VLKSIDRFAYSPNQQQESGGWRTTKSKLR 1163

Query: 494  LQKRGLLTQQ 465
            L KR L T +
Sbjct: 1164 LPKRNLPTSK 1173