BLASTX nr result
ID: Coptis24_contig00026542
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026542 (838 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li... 97 3e-18 emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera] 94 4e-17 ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arab... 91 3e-16 gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana] 90 5e-16 ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabido... 90 5e-16 >ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera] Length = 1255 Score = 97.4 bits (241), Expect = 3e-18 Identities = 54/120 (45%), Positives = 71/120 (59%), Gaps = 5/120 (4%) Frame = -3 Query: 836 CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKDKA---PV 666 CVF ++CPFC+ + LG+++MA +A N+ LLNKIL YFD +EIK+ EAS DK P Sbjct: 1130 CVFNTIYCPFCSTPNNCLGVQIMATNASNVDLLNKILFYFDRLEIKNPEASTDKGIKNPE 1189 Query: 665 PGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSY--SPDQQNDEGWRITKSKLRL 492 + DL +G +S +V+ L P EKFSY QQN GWR TKSK R+ Sbjct: 1190 SSEDKDLSP----------PSGSNSDEVSELDPFEKFSYKHQEPQQNSNGWRTTKSKNRI 1239 >emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera] Length = 1261 Score = 94.0 bits (232), Expect = 4e-17 Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 5/118 (4%) Frame = -3 Query: 836 CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKDKA---PV 666 CVF ++CPFC+ + LG+++MA +A N+ LLNKIL YFD +EIK+ EAS DK P Sbjct: 1092 CVFNTIYCPFCSTPNNCLGVQIMATNASNVELLNKILFYFDRLEIKNPEASTDKGIKNPE 1151 Query: 665 PGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSY--SPDQQNDEGWRITKSKL 498 + DL +G +S +V+ L P EK SY QQN GWR TKSK+ Sbjct: 1152 SSEDKDLSP----------PSGSNSDEVSELDPFEKXSYKHQEPQQNSNGWRTTKSKV 1199 >ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp. lyrata] gi|297338969|gb|EFH69386.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp. lyrata] Length = 1171 Score = 90.9 bits (224), Expect = 3e-16 Identities = 56/130 (43%), Positives = 74/130 (56%), Gaps = 6/130 (4%) Frame = -3 Query: 836 CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKD-----KA 672 CVF + CPFC+ + LG++VMA D+ N+ L+KIL + DH+E+ + ASKD K Sbjct: 1058 CVFNTISCPFCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEVTNEAASKDSTLKHKE 1117 Query: 671 PVPGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSYSPDQQNDE-GWRITKSKLR 495 P+ N+ AV S+ V IE+F+YSP+QQ D GWR TKSKLR Sbjct: 1118 PLAETNA----AVDKSD--------------VFKSIERFAYSPNQQQDSGGWRTTKSKLR 1159 Query: 494 LQKRGLLTQQ 465 L KR L T Q Sbjct: 1160 LPKRNLPTSQ 1169 >gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana] Length = 1273 Score = 90.1 bits (222), Expect = 5e-16 Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 6/130 (4%) Frame = -3 Query: 836 CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKD-----KA 672 CVF ++CPFC+ + LG++VMA D+ N+ L+KIL + DH+E+ + ASKD K Sbjct: 1160 CVFNTIYCPFCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEVTNEAASKDSTLKHKE 1219 Query: 671 PVPGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSYSPDQQNDE-GWRITKSKLR 495 P+ N+ AV S+ VL I++F+YSP+QQ + GWR TKSKLR Sbjct: 1220 PLAETNA----AVDKSD--------------VLKSIDRFAYSPNQQQESGGWRTTKSKLR 1261 Query: 494 LQKRGLLTQQ 465 L KR L T + Sbjct: 1262 LPKRNLPTSK 1271 >ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana] gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana] Length = 1175 Score = 90.1 bits (222), Expect = 5e-16 Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 6/130 (4%) Frame = -3 Query: 836 CVFRPVFCPFCAASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEASKD-----KA 672 CVF ++CPFC+ + LG++VMA D+ N+ L+KIL + DH+E+ + ASKD K Sbjct: 1062 CVFNTIYCPFCSIPNTCLGVQVMATDSSNVQFLSKILFFADHLEVTNEAASKDSTLKHKE 1121 Query: 671 PVPGGNSDLGQAVGGSNLNQVSNGPDSGQVAVLIPIEKFSYSPDQQNDE-GWRITKSKLR 495 P+ N+ AV S+ VL I++F+YSP+QQ + GWR TKSKLR Sbjct: 1122 PLAETNA----AVDKSD--------------VLKSIDRFAYSPNQQQESGGWRTTKSKLR 1163 Query: 494 LQKRGLLTQQ 465 L KR L T + Sbjct: 1164 LPKRNLPTSK 1173