BLASTX nr result
ID: Coptis24_contig00026539
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026539 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 ref|XP_002527563.1| conserved hypothetical protein [Ricinus comm... 75 7e-12 ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycin... 73 3e-11 ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago ... 71 1e-10 ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265... 70 2e-10 >ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1| predicted protein [Populus trichocarpa] Length = 129 Score = 77.0 bits (188), Expect = 1e-12 Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 7/94 (7%) Frame = +3 Query: 6 SFSSVTLPSSKFPT----NSVSNHGFQKSLIITKCEQTNDSSE---LSADRNSTLKIGSA 164 SFSS + PT +S++N +K +IT+CE SS L A + L IGS Sbjct: 4 SFSSTSTIPRTNPTLQSNHSINNARNRKLNVITRCESRESSSSETNLPAKSTAKLGIGSP 63 Query: 165 IIVVDAPKTIKTAASVPCLRVNTDLVKTGDVGRI 266 ++V++APK IKTAA++PCLRVNT VK GDVGRI Sbjct: 64 VVVIEAPKMIKTAATMPCLRVNTGFVKPGDVGRI 97 >ref|XP_002527563.1| conserved hypothetical protein [Ricinus communis] gi|223533055|gb|EEF34815.1| conserved hypothetical protein [Ricinus communis] Length = 128 Score = 74.7 bits (182), Expect = 7e-12 Identities = 40/62 (64%), Positives = 45/62 (72%), Gaps = 1/62 (1%) Frame = +3 Query: 84 IITKCEQTNDSSELSADRNST-LKIGSAIIVVDAPKTIKTAASVPCLRVNTDLVKTGDVG 260 + TKC+ SSE S T L IGS I+VV+APK IKTAASVPCLRVN+ LVK GDVG Sbjct: 35 VATKCQSQESSSETSPPAKITKLAIGSPIVVVEAPKMIKTAASVPCLRVNSGLVKPGDVG 94 Query: 261 RI 266 RI Sbjct: 95 RI 96 >ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max] gi|255626895|gb|ACU13792.1| unknown [Glycine max] Length = 128 Score = 72.8 bits (177), Expect = 3e-11 Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 4/88 (4%) Frame = +3 Query: 15 SVTLPSSKFPTNSVSNHGFQKS----LIITKCEQTNDSSELSADRNSTLKIGSAIIVVDA 182 ++T P + S N Q+ + + +CE SSEL +++S L+IGS II ++A Sbjct: 8 AITKPFLRVQDRSSMNCELQRPKNGVVALIRCESKESSSELP-EKHSKLEIGSPIIFIEA 66 Query: 183 PKTIKTAASVPCLRVNTDLVKTGDVGRI 266 PK IKTAA++PCLRVN+ LVK GDVGRI Sbjct: 67 PKMIKTAATMPCLRVNSGLVKPGDVGRI 94 >ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago truncatula] gi|355490404|gb|AES71607.1| hypothetical protein MTR_3g079820 [Medicago truncatula] Length = 128 Score = 70.9 bits (172), Expect = 1e-10 Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 3/86 (3%) Frame = +3 Query: 18 VTLPSSKFPTNSV--SNHGFQKSLIITKCEQTNDSSELSA-DRNSTLKIGSAIIVVDAPK 188 +T P KF ++ H S+ + +CE + S E ++ S L GS II+++APK Sbjct: 9 ITKPFLKFNSSLKYQQQHRPNISVALVRCESKDSSEENELLEKRSKLDKGSPIIIIEAPK 68 Query: 189 TIKTAASVPCLRVNTDLVKTGDVGRI 266 IKTAASVPCLRVN+ LVK GDVGRI Sbjct: 69 MIKTAASVPCLRVNSGLVKPGDVGRI 94 >ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265104 [Vitis vinifera] gi|296084005|emb|CBI24393.3| unnamed protein product [Vitis vinifera] Length = 113 Score = 69.7 bits (169), Expect = 2e-10 Identities = 40/88 (45%), Positives = 53/88 (60%) Frame = +3 Query: 3 LSFSSVTLPSSKFPTNSVSNHGFQKSLIITKCEQTNDSSELSADRNSTLKIGSAIIVVDA 182 LS SS+ + P N KS++ + + E S+ + S L+IGS IIV++A Sbjct: 3 LSLSSIFGVAGSKPLN--------KSILERQTRVKCEFGEKSSPKTSELEIGSPIIVIEA 54 Query: 183 PKTIKTAASVPCLRVNTDLVKTGDVGRI 266 PK +KTAASVPCLR N LVK GDVGR+ Sbjct: 55 PKVLKTAASVPCLRANAGLVKAGDVGRV 82