BLASTX nr result

ID: Coptis24_contig00026539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026539
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002527563.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycin...    73   3e-11
ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago ...    71   1e-10
ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265...    70   2e-10

>ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 45/94 (47%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
 Frame = +3

Query: 6   SFSSVTLPSSKFPT----NSVSNHGFQKSLIITKCEQTNDSSE---LSADRNSTLKIGSA 164
           SFSS +      PT    +S++N   +K  +IT+CE    SS    L A   + L IGS 
Sbjct: 4   SFSSTSTIPRTNPTLQSNHSINNARNRKLNVITRCESRESSSSETNLPAKSTAKLGIGSP 63

Query: 165 IIVVDAPKTIKTAASVPCLRVNTDLVKTGDVGRI 266
           ++V++APK IKTAA++PCLRVNT  VK GDVGRI
Sbjct: 64  VVVIEAPKMIKTAATMPCLRVNTGFVKPGDVGRI 97


>ref|XP_002527563.1| conserved hypothetical protein [Ricinus communis]
           gi|223533055|gb|EEF34815.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/62 (64%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
 Frame = +3

Query: 84  IITKCEQTNDSSELSADRNST-LKIGSAIIVVDAPKTIKTAASVPCLRVNTDLVKTGDVG 260
           + TKC+    SSE S     T L IGS I+VV+APK IKTAASVPCLRVN+ LVK GDVG
Sbjct: 35  VATKCQSQESSSETSPPAKITKLAIGSPIVVVEAPKMIKTAASVPCLRVNSGLVKPGDVG 94

Query: 261 RI 266
           RI
Sbjct: 95  RI 96


>ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max]
           gi|255626895|gb|ACU13792.1| unknown [Glycine max]
          Length = 128

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
 Frame = +3

Query: 15  SVTLPSSKFPTNSVSNHGFQKS----LIITKCEQTNDSSELSADRNSTLKIGSAIIVVDA 182
           ++T P  +    S  N   Q+     + + +CE    SSEL  +++S L+IGS II ++A
Sbjct: 8   AITKPFLRVQDRSSMNCELQRPKNGVVALIRCESKESSSELP-EKHSKLEIGSPIIFIEA 66

Query: 183 PKTIKTAASVPCLRVNTDLVKTGDVGRI 266
           PK IKTAA++PCLRVN+ LVK GDVGRI
Sbjct: 67  PKMIKTAATMPCLRVNSGLVKPGDVGRI 94


>ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago truncatula]
           gi|355490404|gb|AES71607.1| hypothetical protein
           MTR_3g079820 [Medicago truncatula]
          Length = 128

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
 Frame = +3

Query: 18  VTLPSSKFPTNSV--SNHGFQKSLIITKCEQTNDSSELSA-DRNSTLKIGSAIIVVDAPK 188
           +T P  KF ++      H    S+ + +CE  + S E    ++ S L  GS II+++APK
Sbjct: 9   ITKPFLKFNSSLKYQQQHRPNISVALVRCESKDSSEENELLEKRSKLDKGSPIIIIEAPK 68

Query: 189 TIKTAASVPCLRVNTDLVKTGDVGRI 266
            IKTAASVPCLRVN+ LVK GDVGRI
Sbjct: 69  MIKTAASVPCLRVNSGLVKPGDVGRI 94


>ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265104 [Vitis vinifera]
           gi|296084005|emb|CBI24393.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/88 (45%), Positives = 53/88 (60%)
 Frame = +3

Query: 3   LSFSSVTLPSSKFPTNSVSNHGFQKSLIITKCEQTNDSSELSADRNSTLKIGSAIIVVDA 182
           LS SS+   +   P N        KS++  +     +  E S+ + S L+IGS IIV++A
Sbjct: 3   LSLSSIFGVAGSKPLN--------KSILERQTRVKCEFGEKSSPKTSELEIGSPIIVIEA 54

Query: 183 PKTIKTAASVPCLRVNTDLVKTGDVGRI 266
           PK +KTAASVPCLR N  LVK GDVGR+
Sbjct: 55  PKVLKTAASVPCLRANAGLVKAGDVGRV 82


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