BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026519
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...   444   e-123
emb|CBI24193.3| unnamed protein product [Vitis vinifera]              444   e-123
emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]   435   e-120
ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117
ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containi...   410   e-112

>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  444 bits (1143), Expect = e-123
 Identities = 210/267 (78%), Positives = 231/267 (86%)
 Frame = +3

Query: 3    SLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEMPV 182
            SLLSACNHGGLV+EGLA+Y SMT+EFGV PGIEHCVCIIDLLGRSGRL+ AE F+KEMPV
Sbjct: 1458 SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV 1517

Query: 183  PPNDLVWRSLLSASRTHNNMELGRKAANHLLELDPSDDSAYVLLSNVCAVNGLWEDVDNI 362
            PPNDL WRSLL+A R H N+EL RK A HLLELDPSDDSAYVL SNVCA +G WEDV+N+
Sbjct: 1518 PPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENL 1577

Query: 363  RRRMTSSKIKKQPACSWVKVNNKVSSFKIGDQSHPQAVQIHGKLKDLKMMIKEAGYVPDT 542
            R+ M S+ IKKQPACSWVK+ +KV SF +G++ HPQA +I  KL +L  M KEAGYVPDT
Sbjct: 1578 RKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDT 1637

Query: 543  SFALHDTDEEQKEHNLWNHSERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSI 722
            SFALHD DEEQKE+NLWNHSERLALAF LI TPE ST+RIFKNLRVCGDCHSVYKFVS I
Sbjct: 1638 SFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGI 1697

Query: 723  VQRKIVLRDPYRFHHFSGGNCSCSDYW 803
            V RKIVLRDPYRFHHFSGG CSC DYW
Sbjct: 1698 VGRKIVLRDPYRFHHFSGGKCSCGDYW 1724



 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 47/143 (32%), Positives = 79/143 (55%)
 Frame = +3

Query: 3   SLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEMPV 182
           SLL AC+H GL  EG   + +M  ++ + P  EH  C++DL  R G L +A   + ++ +
Sbjct: 440 SLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDI 499

Query: 183 PPNDLVWRSLLSASRTHNNMELGRKAANHLLELDPSDDSAYVLLSNVCAVNGLWEDVDNI 362
             N  +W ++L AS  +  M LG++AA++L  + P +   YV+L+++ +  GLW+D   I
Sbjct: 500 KHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKI 559

Query: 363 RRRMTSSKIKKQPACSWVKVNNK 431
           R+ M     KK    S+ +   K
Sbjct: 560 RKLMEERSTKKNAGYSFFQATKK 582


>emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  444 bits (1143), Expect = e-123
 Identities = 210/267 (78%), Positives = 231/267 (86%)
 Frame = +3

Query: 3    SLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEMPV 182
            SLLSACNHGGLV+EGLA+Y SMT+EFGV PGIEHCVCIIDLLGRSGRL+ AE F+KEMPV
Sbjct: 817  SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV 876

Query: 183  PPNDLVWRSLLSASRTHNNMELGRKAANHLLELDPSDDSAYVLLSNVCAVNGLWEDVDNI 362
            PPNDL WRSLL+A R H N+EL RK A HLLELDPSDDSAYVL SNVCA +G WEDV+N+
Sbjct: 877  PPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENL 936

Query: 363  RRRMTSSKIKKQPACSWVKVNNKVSSFKIGDQSHPQAVQIHGKLKDLKMMIKEAGYVPDT 542
            R+ M S+ IKKQPACSWVK+ +KV SF +G++ HPQA +I  KL +L  M KEAGYVPDT
Sbjct: 937  RKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDT 996

Query: 543  SFALHDTDEEQKEHNLWNHSERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSI 722
            SFALHD DEEQKE+NLWNHSERLALAF LI TPE ST+RIFKNLRVCGDCHSVYKFVS I
Sbjct: 997  SFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGI 1056

Query: 723  VQRKIVLRDPYRFHHFSGGNCSCSDYW 803
            V RKIVLRDPYRFHHFSGG CSC DYW
Sbjct: 1057 VGRKIVLRDPYRFHHFSGGKCSCGDYW 1083


>emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  435 bits (1119), Expect = e-120
 Identities = 207/263 (78%), Positives = 228/263 (86%)
 Frame = +3

Query: 3    SLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEMPV 182
            SLLSACNHGGLV+EGLA+Y SMT+EFGV PGIEHCVCIIDLLGRSGRL+ AE F+KEMPV
Sbjct: 808  SLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPV 867

Query: 183  PPNDLVWRSLLSASRTHNNMELGRKAANHLLELDPSDDSAYVLLSNVCAVNGLWEDVDNI 362
            PPNDL WRSLL+A R H N+EL RK A HLLELDPSDDSAYVL SNVCA +G WEDV+N+
Sbjct: 868  PPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENL 927

Query: 363  RRRMTSSKIKKQPACSWVKVNNKVSSFKIGDQSHPQAVQIHGKLKDLKMMIKEAGYVPDT 542
            R+ M S+ IKKQPACSWVK+ +KV SF +G++ HPQA +I  KL +L  M KEAGYVPDT
Sbjct: 928  RKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDT 987

Query: 543  SFALHDTDEEQKEHNLWNHSERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSI 722
            SFALHD DEEQKE+NLWNHSERLALAF LI TPE ST+RIFKNLRVCGDCHSVYKFVS I
Sbjct: 988  SFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGI 1047

Query: 723  VQRKIVLRDPYRFHHFSGGNCSC 791
            V RKIVLRDPYRFHHFSGG CSC
Sbjct: 1048 VGRKIVLRDPYRFHHFSGGKCSC 1070


>ref|XP_002310674.1| predicted protein [Populus trichocarpa] gi|222853577|gb|EEE91124.1|
            predicted protein [Populus trichocarpa]
          Length = 908

 Score =  427 bits (1098), Expect = e-117
 Identities = 198/267 (74%), Positives = 229/267 (85%)
 Frame = +3

Query: 3    SLLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEMPV 182
            SLLSAC+HGG+VEEGLA+Y SM KEFG+P  I HCVCIIDLLGRSGR  +AE F+KEMPV
Sbjct: 642  SLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPV 701

Query: 183  PPNDLVWRSLLSASRTHNNMELGRKAANHLLELDPSDDSAYVLLSNVCAVNGLWEDVDNI 362
             P D VWRSLL+A +TH N+ELGRKA  +LL+LDPSDDSAYVL SN+CA  G WEDV+ I
Sbjct: 702  SPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKI 761

Query: 363  RRRMTSSKIKKQPACSWVKVNNKVSSFKIGDQSHPQAVQIHGKLKDLKMMIKEAGYVPDT 542
            RR+M  +KIKK+PACSWVK+ NK+S F +GD SHPQA +I+ KL++LK MIKEAGY+PD 
Sbjct: 762  RRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDI 821

Query: 543  SFALHDTDEEQKEHNLWNHSERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSI 722
            S+AL DTDEEQKEHNLWNHSERLALA+ LI +PEGST++IFKNLRVCGDCHSVYKF S I
Sbjct: 822  SYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGI 881

Query: 723  VQRKIVLRDPYRFHHFSGGNCSCSDYW 803
            + RKIVLRDPYRFH FSGG CSC+DYW
Sbjct: 882  LGRKIVLRDPYRFHQFSGGQCSCTDYW 908


>ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus] gi|449497665|ref|XP_004160467.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  410 bits (1054), Expect = e-112
 Identities = 189/266 (71%), Positives = 226/266 (84%)
 Frame = +3

Query: 6    LLSACNHGGLVEEGLAHYASMTKEFGVPPGIEHCVCIIDLLGRSGRLNDAEKFVKEMPVP 185
            LLSAC+HGGLV+EGLA+YASMT  +G+ PGIEHCVC+IDLLGRSGRL +AE F+ EMP+P
Sbjct: 673  LLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIP 732

Query: 186  PNDLVWRSLLSASRTHNNMELGRKAANHLLELDPSDDSAYVLLSNVCAVNGLWEDVDNIR 365
            PNDLVWRSLL++ R + N++LGRKAA HLLELDPSDDSAYVL SNV A  G WEDV+++R
Sbjct: 733  PNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVR 792

Query: 366  RRMTSSKIKKQPACSWVKVNNKVSSFKIGDQSHPQAVQIHGKLKDLKMMIKEAGYVPDTS 545
             +M + KI+K+PA SWVK    +S F +GDQ+HPQ  QI+GKL  L  ++ EAGYVPDTS
Sbjct: 793  GQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTS 852

Query: 546  FALHDTDEEQKEHNLWNHSERLALAFSLIGTPEGSTIRIFKNLRVCGDCHSVYKFVSSIV 725
            ++L DTDEEQKEHN+W+HSER+ALAF LI  PEGST+RIFKNLRVCGDCHS +KFVS ++
Sbjct: 853  YSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVL 912

Query: 726  QRKIVLRDPYRFHHFSGGNCSCSDYW 803
             RKIVLRDPYRFHHF+ GNCSCSDYW
Sbjct: 913  GRKIVLRDPYRFHHFTNGNCSCSDYW 938