BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026516
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    75   7e-12
gb|EEE54368.1| hypothetical protein OsJ_01373 [Oryza sativa Japo...    74   1e-11
gb|EEC84520.1| hypothetical protein OsI_31232 [Oryza sativa Indi...    74   2e-11
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...    73   2e-11

>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/147 (34%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
 Frame = -2

Query: 438 ANTFKALPRLTFSVLCCGRSDQ-EAMESQDRISDLPDSMLLHILSFLSMKEVVLTGVLSK 262
           + TF   P L  + L   RS Q +  +  DRIS+LPD ++ HILSFL   + + T +LSK
Sbjct: 16  STTFYRTPNLKNNPLKRPRSCQNKECQKVDRISNLPDPIIQHILSFLPADDAIKTCILSK 75

Query: 261 RWDHLWTKAMHLRYLGPRITTSYKEDKERFFKFVIHTLHLRETNPIEEFSLDFPLSEHSP 82
           RWD +WT   +L +   R   S  ++ E F  FV   L    +  +++F ++F  +E   
Sbjct: 76  RWDSIWTLVPNLIF---RRECSCSQEAENFAVFVDKALMHYCSPKVKKFLVEFEFTE--- 129

Query: 81  LEITILSIHVFTWIHFAVKRKVKIICL 1
                    V +W+ FAV+ KV+ +CL
Sbjct: 130 ----CFKAQVDSWVDFAVRLKVEELCL 152


>gb|EEE54368.1| hypothetical protein OsJ_01373 [Oryza sativa Japonica Group]
          Length = 429

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 44/118 (37%), Positives = 61/118 (51%)
 Frame = -2

Query: 354 DRISDLPDSMLLHILSFLSMKEVVLTGVLSKRWDHLWTKAMHLRYLGPRITTSYKEDKER 175
           DRIS LP ++L H+LSFL  KEVV T VL++RW HLW     LR  G         D   
Sbjct: 16  DRISFLPTALLQHVLSFLQAKEVVRTCVLARRWRHLWKSMPILRVTG-------AGDARA 68

Query: 174 FFKFVIHTLHLRETNPIEEFSLDFPLSEHSPLEITILSIHVFTWIHFAVKRKVKIICL 1
           F  F  H L LR+ +P+E  + DF +     + I  L      WI + +  +V+++ L
Sbjct: 69  FHTFTYHLLLLRDRSPLESCTFDFNVFSKDDMPIVNL------WIRYVLLCQVRVLTL 120


>gb|EEC84520.1| hypothetical protein OsI_31232 [Oryza sativa Indica Group]
          Length = 764

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 44/118 (37%), Positives = 61/118 (51%)
 Frame = -2

Query: 354 DRISDLPDSMLLHILSFLSMKEVVLTGVLSKRWDHLWTKAMHLRYLGPRITTSYKEDKER 175
           DRIS LP ++L H+LSFL  KEVV T VL++RW HLW     LR  G         D   
Sbjct: 379 DRISFLPTALLQHVLSFLQAKEVVRTCVLARRWRHLWKPMPILRVTG-------AGDARA 431

Query: 174 FFKFVIHTLHLRETNPIEEFSLDFPLSEHSPLEITILSIHVFTWIHFAVKRKVKIICL 1
           F  F  H L LR+ +P+E  + DF +     + I  L      WI + +  +V+++ L
Sbjct: 432 FHTFTYHLLLLRDRSPLESCTFDFNVFSKDDMPIVNL------WIRYVLLCQVRVLTL 483


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/116 (34%), Positives = 64/116 (55%)
 Frame = -2

Query: 348 ISDLPDSMLLHILSFLSMKEVVLTGVLSKRWDHLWTKAMHLRYLGPRITTSYKEDKERFF 169
           I+DLPD++L HILSFL  K+ V T +LS++W+HLW    +L +        +K  ++ F 
Sbjct: 40  INDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEF----HQCYFKAKRKIFM 95

Query: 168 KFVIHTLHLRETNPIEEFSLDFPLSEHSPLEITILSIHVFTWIHFAVKRKVKIICL 1
             V   L LR+++ IE+F+L   + +         +    TW+  AV R VK +C+
Sbjct: 96  NSVERVLLLRDSSNIEKFTLSCGIDD---------ATRTRTWVSAAVNRNVKELCV 142


>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 482

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 40/83 (48%), Positives = 53/83 (63%)
 Frame = -2

Query: 378 DQEAMESQDRISDLPDSMLLHILSFLSMKEVVLTGVLSKRWDHLWTKAMHLRYLGPRITT 199
           +Q   ES+DR+SDLPD ++LHILSFL+ K VV T VLSKRW HLW +   L     R +T
Sbjct: 27  NQSNEESEDRLSDLPDGIILHILSFLNTKHVVRTCVLSKRWRHLWKRIPTLMLYASRFST 86

Query: 198 SYKEDKERFFKFVIHTLHLRETN 130
                 ++F  FV + L LR+T+
Sbjct: 87  -----VKQFAMFVSNILTLRDTS 104