BLASTX nr result

ID: Coptis24_contig00026513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026513
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635604.1| PREDICTED: uncharacterized protein LOC100852...   101   7e-20
emb|CAN61422.1| hypothetical protein VITISV_030754 [Vitis vinifera]   100   1e-19
emb|CAN78763.1| hypothetical protein VITISV_003315 [Vitis vinifera]    99   3e-19
gb|ABA97336.1| transposon protein, putative, CACTA, En/Spm sub-c...    99   4e-19
ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261...    99   4e-19

>ref|XP_003635604.1| PREDICTED: uncharacterized protein LOC100852669, partial [Vitis
            vinifera]
          Length = 886

 Score =  101 bits (251), Expect = 7e-20
 Identities = 61/172 (35%), Positives = 90/172 (52%), Gaps = 27/172 (15%)
 Frame = -2

Query: 437  RVTRYNDCIIVNDIRYHTKDREATLRTQNSGMVS*QMF*S*NIYLENEFFFSSVTGGMLV 258
            RV+ Y+ C+ VN IR+HTKDR+    TQNSG++          + E+   F  V   ++V
Sbjct: 668  RVSLYHSCV-VNGIRFHTKDRDDRHTTQNSGVLVL------GDHYEDMIDFYGVLLNVVV 720

Query: 257  ---------------------TKTGIHIDGNFTSVNVSKKWYRDDPFVLATQASHVFYLE 141
                                  K  +  DG    +NV  KWY +DP+VLA+QA  +FY+ 
Sbjct: 721  LDYIFNNQVVLFKCEWFDTDPNKKRLQDDGVLRCINVDNKWYEEDPYVLASQAQQIFYIN 780

Query: 140  DTKLRGTW*VVQKVTHRNVYDVLEKDELNDAEHD------DEAYQQEEQLGV 3
            D KL  +W VVQKV HR+++DV E+   ND+E+D      +EAYQ+ +   +
Sbjct: 781  DPKLGSSWKVVQKVLHRHIFDVPEQTTTNDSENDNEDPTIEEAYQENDSTDI 832


>emb|CAN61422.1| hypothetical protein VITISV_030754 [Vitis vinifera]
          Length = 539

 Score =  100 bits (249), Expect = 1e-19
 Identities = 61/172 (35%), Positives = 90/172 (52%), Gaps = 27/172 (15%)
 Frame = -2

Query: 437 RVTRYNDCIIVNDIRYHTKDREATLRTQNSGMVS*QMF*S*NIYLENEFFFSSVTGGMLV 258
           RV+ Y+ C+ VN IR+HTKDR+    TQNSG++          + E+   F  V   ++V
Sbjct: 93  RVSLYHSCV-VNGIRFHTKDRDDRHTTQNSGVLVL------GDHYEDMIDFYGVLLNVVV 145

Query: 257 ---------------------TKTGIHIDGNFTSVNVSKKWYRDDPFVLATQASHVFYLE 141
                                 K  +  DG    +NV  KWY +DP+VLA+QA  +FY+ 
Sbjct: 146 LDYIFNNQVVLFKCEWFDTDPNKKRLLDDGVLRCINVDNKWYEEDPYVLASQAQQIFYVN 205

Query: 140 DTKLRGTW*VVQKVTHRNVYDVLEKDELNDAEHD------DEAYQQEEQLGV 3
           D KL  +W VVQKV HR+++DV E+   ND+E+D      +EAYQ+ +   +
Sbjct: 206 DPKLGSSWKVVQKVLHRHIFDVXEQTTTNDSENDNEDPTIEEAYQENDSTDI 257


>emb|CAN78763.1| hypothetical protein VITISV_003315 [Vitis vinifera]
          Length = 1226

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 21/162 (12%)
 Frame = -2

Query: 437  RVTRYNDCIIVNDIRYHTKDREATLRTQNSGMVS*QMF*S*NIYLENEFFFSSVTGGMLV 258
            RV+ Y+ C+ VN IR+HTKDR+    TQNSG++          + E+   F  V   ++V
Sbjct: 721  RVSLYHSCV-VNGIRFHTKDRDDRHXTQNSGVLVL------GDHYEDMIDFYGVLLNVVV 773

Query: 257  ---------------------TKTGIHIDGNFTSVNVSKKWYRDDPFVLATQASHVFYLE 141
                                  K  +  DG    +NV  KWY +DP+VLA+QA  +FY+ 
Sbjct: 774  LDYIFNNQVVLFKCEWFDTDPNKKRLQDDGVLRCINVDNKWYEEDPYVLASQAQQIFYVN 833

Query: 140  DTKLRGTW*VVQKVTHRNVYDVLEKDELNDAEHDDEAYQQEE 15
            D KL  +W VVQKV HR+++DV E+   ND+E+D+E    EE
Sbjct: 834  DPKLGSSWKVVQKVLHRHIFDVPEQTTTNDSENDNEDPTIEE 875


>gb|ABA97336.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
            Japonica Group]
          Length = 1118

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 61/154 (39%), Positives = 83/154 (53%), Gaps = 20/154 (12%)
 Frame = -2

Query: 410  IVNDIRYHTKDREATLRTQNSGMVS*QMF*S*NI-------------YLENEFFFSSVTG 270
            IVN +RY T DRE  L+TQNSG++        NI             Y  +   + SV  
Sbjct: 894  IVNGVRYSTVDREKYLQTQNSGVMVDGTHEGDNIEFYGVLREILELQYNSDLDIYRSVVL 953

Query: 269  GML-----VTKT-GIHIDGNFTSVNVSKKWYRDDPFVLATQASHVFYLEDTKLRGTW*VV 108
                    V KT G+  DG+F S+N+   WY+DDPF+LATQ+  +FYL+DT L   W +V
Sbjct: 954  FRCDWFNQVGKTRGVRDDGHFKSINIQSFWYKDDPFILATQSKKIFYLQDTSLGNEWRIV 1013

Query: 107  QKVTHRNVYDVLEKDE-LNDAEHDDEAYQQEEQL 9
            QK  HRN+Y+V EKD+ + D   DD     E ++
Sbjct: 1014 QKFEHRNMYNVSEKDDHIFDVHQDDNCSDTEHEV 1047


>ref|XP_002268753.2| PREDICTED: uncharacterized protein LOC100261419 [Vitis vinifera]
          Length = 1410

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 61/172 (35%), Positives = 90/172 (52%), Gaps = 27/172 (15%)
 Frame = -2

Query: 437  RVTRYNDCIIVNDIRYHTKDREATLRTQNSGMVS*QMF*S*NIYLENEFFFSSVTGGMLV 258
            RV+ Y+ C+ VN IR+HTKDR+    TQNSG++          + E+   F  V   ++V
Sbjct: 879  RVSLYHSCV-VNGIRFHTKDRDDRHITQNSGVLVL------GDHYEDMIDFYGVLLNVVV 931

Query: 257  ---------------------TKTGIHIDGNFTSVNVSKKWYRDDPFVLATQASHVFYLE 141
                                  K  +  DG    +NV  KWY +DP+VLA+QA  +FY+ 
Sbjct: 932  LDYIFNNQVVLFKCEWFDTDPNKKRLLDDGVLRCINVDNKWYEEDPYVLASQAQQIFYVN 991

Query: 140  DTKLRGTW*VVQKVTHRNVYDVLEKDELNDAEHD------DEAYQQEEQLGV 3
            D KL  +W VVQKV HR+++DV E+   ND+E+D      +EAYQ+ +   +
Sbjct: 992  DPKLGSSWKVVQKVLHRHIFDVPEQTTTNDSENDNEDPTIEEAYQENDSTDI 1043


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