BLASTX nr result

ID: Coptis24_contig00026512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026512
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   182   2e-44
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   182   2e-44
dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]                      182   2e-44
ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   181   7e-44
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   177   6e-43

>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
           gi|25054836|gb|AAN71908.1| putative beta-amylase
           [Arabidopsis thaliana]
          Length = 484

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/110 (76%), Positives = 98/110 (89%)
 Frame = -2

Query: 330 VKALTMSLKALKLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLC 151
           +KALT+SLKALKLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LC
Sbjct: 69  LKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALC 128

Query: 150 FHSNEQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTLGVDQ 1
           FHSN   F GKGG+SLPLWI EIG ++ DIYYRD++GFSNNDYLTLGVDQ
Sbjct: 129 FHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQ 178


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
           gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName:
           Full=Inactive beta-amylase 4, chloroplastic; AltName:
           Full=Inactive beta-amylase 6; Flags: Precursor
           gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
           thaliana] gi|332009286|gb|AED96669.1| inactive
           beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/110 (76%), Positives = 98/110 (89%)
 Frame = -2

Query: 330 VKALTMSLKALKLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLC 151
           +KALT+SLKALKLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LC
Sbjct: 116 LKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALC 175

Query: 150 FHSNEQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTLGVDQ 1
           FHSN   F GKGG+SLPLWI EIG ++ DIYYRD++GFSNNDYLTLGVDQ
Sbjct: 176 FHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQ 225


>dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]
          Length = 498

 Score =  182 bits (462), Expect = 2e-44
 Identities = 84/110 (76%), Positives = 98/110 (89%)
 Frame = -2

Query: 330 VKALTMSLKALKLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLC 151
           +KALT+SLKALKLAGVHGI VEVWWGIVER SP ++ WS+YE+LF+LIS +GLKLHV+LC
Sbjct: 83  LKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALC 142

Query: 150 FHSNEQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTLGVDQ 1
           FHSN   F GKGG+SLPLWI EIG ++ DIYYRD++GFSNNDYLTLGVDQ
Sbjct: 143 FHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKSGFSNNDYLTLGVDQ 192


>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
           gi|296089917|emb|CBI39736.3| unnamed protein product
           [Vitis vinifera]
          Length = 522

 Score =  181 bits (458), Expect = 7e-44
 Identities = 89/111 (80%), Positives = 98/111 (88%), Gaps = 1/111 (0%)
 Frame = -2

Query: 330 VKALTMSLKALKLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLC 151
           +KALT+SLKALKLAGVHGI VEVWWGIVER SPF YNWS+YE+LFKLIS SGLKLHV+L 
Sbjct: 106 IKALTISLKALKLAGVHGIAVEVWWGIVERFSPFVYNWSLYEELFKLISESGLKLHVALS 165

Query: 150 FHSN-EQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTLGVDQ 1
           FHSN   S   KGGVSLPLWI+EIG L+ DIYYRDQNGFSN+DYLTLGVD+
Sbjct: 166 FHSNMHSSSRVKGGVSLPLWIVEIGDLNKDIYYRDQNGFSNDDYLTLGVDE 216


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 531

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/110 (74%), Positives = 95/110 (86%)
 Frame = -2

Query: 330 VKALTMSLKALKLAGVHGITVEVWWGIVERCSPFDYNWSVYEQLFKLISGSGLKLHVSLC 151
           +KALT+SLKALKLAGVHGI VEVWWGIVER  P ++ WS+YE+LF+LIS +GLKLHV+LC
Sbjct: 116 LKALTVSLKALKLAGVHGIAVEVWWGIVERFCPLEFKWSLYEELFRLISEAGLKLHVALC 175

Query: 150 FHSNEQSFNGKGGVSLPLWILEIGRLDGDIYYRDQNGFSNNDYLTLGVDQ 1
           FHSN   F GKGG+SLPLWI EIG ++ DIYYRD+ G SNNDYLTLGVDQ
Sbjct: 176 FHSNMHLFGGKGGISLPLWIREIGDVNKDIYYRDKRGLSNNDYLTLGVDQ 225


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