BLASTX nr result
ID: Coptis24_contig00026508
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026508 (228 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus c... 71 8e-11 ref|XP_002309476.1| predicted protein [Populus trichocarpa] gi|2... 69 4e-10 dbj|BAK61855.1| hypothetical protein [Citrus unshiu] 68 9e-10 ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 >ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus communis] gi|223539424|gb|EEF41014.1| hypothetical protein RCOM_0653450 [Ricinus communis] Length = 426 Score = 71.2 bits (173), Expect = 8e-11 Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 4/78 (5%) Frame = +3 Query: 6 AREFLKGYQEKKKMNDFPMRDA----HRDYQXXXXXXXXXXXXXAESYASSDLFELDNFA 173 AR+ L+ +Q KKK +F + + +++ + A SYASSDLFELDN + Sbjct: 337 ARDLLRNFQ-KKKQEEFDVSNGNVPRYQELEEDDDNEEEEDDDDAASYASSDLFELDNLS 395 Query: 174 AIGIERYREELPVYETTH 227 AIGIERYREELPVYETTH Sbjct: 396 AIGIERYREELPVYETTH 413 >ref|XP_002309476.1| predicted protein [Populus trichocarpa] gi|222855452|gb|EEE92999.1| predicted protein [Populus trichocarpa] Length = 455 Score = 68.9 bits (167), Expect = 4e-10 Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Frame = +3 Query: 6 AREFLKGYQEKKKMNDFPMRDAHRDYQXXXXXXXXXXXXXAESYASSDLFELDNFAAIGI 185 AREFLK +++ +K ND M D Y A SY+SSDLFELD+ A IG Sbjct: 368 AREFLKDHRQNQKKNDVTMIDVRGKYNDRYHDEDEDEDDDAASYSSSDLFELDHLAVIGN 427 Query: 186 E-RYREELPVYETTH 227 + RY EELPVYETTH Sbjct: 428 DRRYCEELPVYETTH 442 >dbj|BAK61855.1| hypothetical protein [Citrus unshiu] Length = 454 Score = 67.8 bits (164), Expect = 9e-10 Identities = 38/74 (51%), Positives = 44/74 (59%) Frame = +3 Query: 6 AREFLKGYQEKKKMNDFPMRDAHRDYQXXXXXXXXXXXXXAESYASSDLFELDNFAAIGI 185 AREFLK Y + +K ND MRD +Y A S +SSDLFELD+ IG Sbjct: 376 AREFLKDYHQNQKKNDVIMRDVRVNYDDDDDD--------AASCSSSDLFELDHLNVIGN 427 Query: 186 ERYREELPVYETTH 227 +RY EELPVYETTH Sbjct: 428 DRYCEELPVYETTH 441 >ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|222841575|gb|EEE79122.1| predicted protein [Populus trichocarpa] Length = 453 Score = 66.2 bits (160), Expect = 3e-09 Identities = 40/77 (51%), Positives = 44/77 (57%), Gaps = 3/77 (3%) Frame = +3 Query: 6 AREFLKGYQEKKKMN-DFPMRDAHRD--YQXXXXXXXXXXXXXAESYASSDLFELDNFAA 176 AR LK YQ KK+ D D D ++ S ASSDLFELDN +A Sbjct: 364 ARNLLKNYQRKKEEQFDHMSTDLCNDNNHEVMSSDEEEEEESDVASCASSDLFELDNLSA 423 Query: 177 IGIERYREELPVYETTH 227 IGIERYREELPVYETTH Sbjct: 424 IGIERYREELPVYETTH 440 >ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|222846854|gb|EEE84401.1| predicted protein [Populus trichocarpa] Length = 380 Score = 65.9 bits (159), Expect = 3e-09 Identities = 36/74 (48%), Positives = 45/74 (60%) Frame = +3 Query: 6 AREFLKGYQEKKKMNDFPMRDAHRDYQXXXXXXXXXXXXXAESYASSDLFELDNFAAIGI 185 AR+ LK YQ+KK+ ++ ++ D S ASSDLFELDN + +GI Sbjct: 307 ARDLLKNYQKKKEEHEEEEEESDDD-------------DDIASCASSDLFELDNLSVVGI 353 Query: 186 ERYREELPVYETTH 227 ERYREELPVYETTH Sbjct: 354 ERYREELPVYETTH 367