BLASTX nr result

ID: Coptis24_contig00026508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026508
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus c...    71   8e-11
ref|XP_002309476.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
dbj|BAK61855.1| hypothetical protein [Citrus unshiu]                   68   9e-10
ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09

>ref|XP_002521346.1| hypothetical protein RCOM_0653450 [Ricinus communis]
           gi|223539424|gb|EEF41014.1| hypothetical protein
           RCOM_0653450 [Ricinus communis]
          Length = 426

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
 Frame = +3

Query: 6   AREFLKGYQEKKKMNDFPMRDA----HRDYQXXXXXXXXXXXXXAESYASSDLFELDNFA 173
           AR+ L+ +Q KKK  +F + +     +++ +             A SYASSDLFELDN +
Sbjct: 337 ARDLLRNFQ-KKKQEEFDVSNGNVPRYQELEEDDDNEEEEDDDDAASYASSDLFELDNLS 395

Query: 174 AIGIERYREELPVYETTH 227
           AIGIERYREELPVYETTH
Sbjct: 396 AIGIERYREELPVYETTH 413


>ref|XP_002309476.1| predicted protein [Populus trichocarpa] gi|222855452|gb|EEE92999.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +3

Query: 6   AREFLKGYQEKKKMNDFPMRDAHRDYQXXXXXXXXXXXXXAESYASSDLFELDNFAAIGI 185
           AREFLK +++ +K ND  M D    Y              A SY+SSDLFELD+ A IG 
Sbjct: 368 AREFLKDHRQNQKKNDVTMIDVRGKYNDRYHDEDEDEDDDAASYSSSDLFELDHLAVIGN 427

Query: 186 E-RYREELPVYETTH 227
           + RY EELPVYETTH
Sbjct: 428 DRRYCEELPVYETTH 442


>dbj|BAK61855.1| hypothetical protein [Citrus unshiu]
          Length = 454

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/74 (51%), Positives = 44/74 (59%)
 Frame = +3

Query: 6   AREFLKGYQEKKKMNDFPMRDAHRDYQXXXXXXXXXXXXXAESYASSDLFELDNFAAIGI 185
           AREFLK Y + +K ND  MRD   +Y              A S +SSDLFELD+   IG 
Sbjct: 376 AREFLKDYHQNQKKNDVIMRDVRVNYDDDDDD--------AASCSSSDLFELDHLNVIGN 427

Query: 186 ERYREELPVYETTH 227
           +RY EELPVYETTH
Sbjct: 428 DRYCEELPVYETTH 441


>ref|XP_002304143.1| predicted protein [Populus trichocarpa] gi|222841575|gb|EEE79122.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/77 (51%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
 Frame = +3

Query: 6   AREFLKGYQEKKKMN-DFPMRDAHRD--YQXXXXXXXXXXXXXAESYASSDLFELDNFAA 176
           AR  LK YQ KK+   D    D   D  ++               S ASSDLFELDN +A
Sbjct: 364 ARNLLKNYQRKKEEQFDHMSTDLCNDNNHEVMSSDEEEEEESDVASCASSDLFELDNLSA 423

Query: 177 IGIERYREELPVYETTH 227
           IGIERYREELPVYETTH
Sbjct: 424 IGIERYREELPVYETTH 440


>ref|XP_002299596.1| predicted protein [Populus trichocarpa] gi|222846854|gb|EEE84401.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/74 (48%), Positives = 45/74 (60%)
 Frame = +3

Query: 6   AREFLKGYQEKKKMNDFPMRDAHRDYQXXXXXXXXXXXXXAESYASSDLFELDNFAAIGI 185
           AR+ LK YQ+KK+ ++    ++  D                 S ASSDLFELDN + +GI
Sbjct: 307 ARDLLKNYQKKKEEHEEEEEESDDD-------------DDIASCASSDLFELDNLSVVGI 353

Query: 186 ERYREELPVYETTH 227
           ERYREELPVYETTH
Sbjct: 354 ERYREELPVYETTH 367


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