BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026501
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]   125   4e-30
ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-30
ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
ref|XP_002532388.1| pentatricopeptide repeat-containing protein,...   116   2e-26
ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26

>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  125 bits (315), Expect(2) = 4e-30
 Identities = 62/107 (57%), Positives = 80/107 (74%)
 Frame = +3

Query: 51   LDVAQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKL 230
            L+ AQ L H++ E G+ P+E I+ SL +CC K G+YAEA  LVD MV+ G +P LESYKL
Sbjct: 764  LEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKL 823

Query: 231  LICGLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLKKGLVE 371
            L+CGL  +G+ +KAK VF  LL   +NYDEVAWKVLI+GLLK+ LV+
Sbjct: 824  LVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 870



 Score = 30.4 bits (67), Expect(2) = 4e-30
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = +1

Query: 1   LELETALKLIEKMVEHG 51
           LE E ALKL EKMVEHG
Sbjct: 727 LEYEIALKLFEKMVEHG 743


>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
            [Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
            protein product [Vitis vinifera]
          Length = 890

 Score =  125 bits (315), Expect(2) = 4e-30
 Identities = 62/107 (57%), Positives = 80/107 (74%)
 Frame = +3

Query: 51   LDVAQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKL 230
            L+ AQ L H++ E G+ P+E I+ SL +CC K G+YAEA  LVD MV+ G +P LESYKL
Sbjct: 753  LEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKL 812

Query: 231  LICGLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLKKGLVE 371
            L+CGL  +G+ +KAK VF  LL   +NYDEVAWKVLI+GLLK+ LV+
Sbjct: 813  LVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVD 859



 Score = 30.4 bits (67), Expect(2) = 4e-30
 Identities = 14/17 (82%), Positives = 14/17 (82%)
 Frame = +1

Query: 1   LELETALKLIEKMVEHG 51
           LE E ALKL EKMVEHG
Sbjct: 716 LEYEIALKLFEKMVEHG 732


>ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
            [Cucumis sativus] gi|449522905|ref|XP_004168466.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/105 (53%), Positives = 78/105 (74%)
 Frame = +3

Query: 51   LDVAQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKL 230
            L+VA  LF ++ E G  PNE I+ SL  C  + G+Y EA   +D+M++  H+P+L+S KL
Sbjct: 774  LEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKL 833

Query: 231  LICGLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLKKGL 365
            L+CGL ++GN +KAK VFC+ L+ E+NYDE+ WKVLI+GLLKKGL
Sbjct: 834  LLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGL 878



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/102 (29%), Positives = 57/102 (55%)
 Frame = +3

Query: 51  LDVAQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKL 230
           ++ A++LF  L E G+  NE I+++L +   K G  ++   L+D M+  G +PN  +Y  
Sbjct: 500 VEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNS 559

Query: 231 LICGLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLK 356
           LI G C + N ++A+ +   +++ +       + +LI+ LLK
Sbjct: 560 LIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLK 601


>ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527912|gb|EEF30000.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 676

 Score =  116 bits (290), Expect(2) = 2e-26
 Identities = 55/105 (52%), Positives = 75/105 (71%)
 Frame = +3

Query: 51  LDVAQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKL 230
           L VAQ LF ++ E G+ P+E+I+ SL NCC + G+Y +A  LV  M++ GH+P LES  +
Sbjct: 539 LGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNV 598

Query: 231 LICGLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLKKGL 365
           L CGL  +G+ +KAK VF  LL+  +N DEVAWK+LI+GLLK GL
Sbjct: 599 LFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGL 643



 Score = 28.1 bits (61), Expect(2) = 2e-26
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +1

Query: 1   LELETALKLIEKMVEHG 51
           ++ ETAL+L EKM+EHG
Sbjct: 502 MKFETALELFEKMLEHG 518



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/104 (30%), Positives = 59/104 (56%)
 Frame = +3

Query: 51  LDVAQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKL 230
           ++ A  LF+ L E G+  NE I+T+L +   K G   +A++L+D M+ +  +PN  +Y  
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324

Query: 231 LICGLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLKKG 362
           LI GLC +  +Q+A  +  ++++         + +LI  +LK+G
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEG 368



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/100 (30%), Positives = 51/100 (51%)
 Frame = +3

Query: 60  AQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKLLIC 239
           A NLF  + E G +PN   +T + N   K     E   ++D MV++G +P++ +Y  LI 
Sbjct: 93  AINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALID 152

Query: 240 GLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLKK 359
           G C +G ++ A+ +   +     N +E  +  LI G  +K
Sbjct: 153 GYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRK 192


>ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like
            [Glycine max]
          Length = 892

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/107 (55%), Positives = 79/107 (73%)
 Frame = +3

Query: 51   LDVAQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKL 230
            L+VA +L+H++ E G+ P+E I  SL + C K GM+ EA  L+D M++  H+ +LESYKL
Sbjct: 755  LNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKL 814

Query: 231  LICGLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLKKGLVE 371
            LICGL  Q N +KA+ VFC+LLR  +NYDEVAWKVLI+GL K G V+
Sbjct: 815  LICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVD 861



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/107 (28%), Positives = 54/107 (50%)
 Frame = +3

Query: 51  LDVAQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKL 230
           +D A  LF  +   G  P++  F +   C  + G   EA  +++ + ++    N  +Y  
Sbjct: 446 VDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTA 505

Query: 231 LICGLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLKKGLVE 371
           LI G C  G I+ A ++F  +L  E   + + + V+I+GL K+G V+
Sbjct: 506 LIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQ 552



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/107 (27%), Positives = 55/107 (51%)
 Frame = +3

Query: 51  LDVAQNLFHYLTEVGLDPNESIFTSLANCCSKYGMYAEASALVDMMVKQGHIPNLESYKL 230
           +D A  + + + E G+ P+   F +L     K GM  +A  ++ +M  +   PN+ +Y  
Sbjct: 341 MDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNE 400

Query: 231 LICGLCNQGNIQKAKTVFCTLLRPEHNYDEVAWKVLIEGLLKKGLVE 371
           LICG C   ++ +A  +   ++  + + D V +  LI GL + G+V+
Sbjct: 401 LICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVD 447