BLASTX nr result
ID: Coptis24_contig00026491
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026491 (256 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259... 100 2e-19 emb|CBI23880.3| unnamed protein product [Vitis vinifera] 100 2e-19 ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223... 95 5e-18 ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arab... 89 5e-16 ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287... 85 5e-15 >ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera] Length = 2197 Score = 100 bits (248), Expect = 2e-19 Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 3/83 (3%) Frame = +1 Query: 4 DLFATECAAILYNLSWFSLKNIHSGNT---CCEFSRIQLPSIVSWLLQAFILSREIPLYF 174 D+F+ E AAI+YN+ WFSLKN S +T CC+ S IQ+ IVSWL+ AF+L RE+P+ F Sbjct: 1476 DVFSVEHAAIIYNICWFSLKNYRSQDTRNICCDQSHIQITKIVSWLMLAFVLCREVPIIF 1535 Query: 175 QKVSKLLATVFLLSTSSERFCLP 243 QKVS+LLA +++LS SSE F LP Sbjct: 1536 QKVSRLLAAIYVLSASSEPFSLP 1558 >emb|CBI23880.3| unnamed protein product [Vitis vinifera] Length = 2158 Score = 100 bits (248), Expect = 2e-19 Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 3/83 (3%) Frame = +1 Query: 4 DLFATECAAILYNLSWFSLKNIHSGNT---CCEFSRIQLPSIVSWLLQAFILSREIPLYF 174 D+F+ E AAI+YN+ WFSLKN S +T CC+ S IQ+ IVSWL+ AF+L RE+P+ F Sbjct: 1423 DVFSVEHAAIIYNICWFSLKNYRSQDTRNICCDQSHIQITKIVSWLMLAFVLCREVPIIF 1482 Query: 175 QKVSKLLATVFLLSTSSERFCLP 243 QKVS+LLA +++LS SSE F LP Sbjct: 1483 QKVSRLLAAIYVLSASSEPFSLP 1505 >ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1| separase, putative [Ricinus communis] Length = 2153 Score = 95.1 bits (235), Expect = 5e-18 Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 3/85 (3%) Frame = +1 Query: 4 DLFATECAAILYNLSWFSLKNIHSGNT---CCEFSRIQLPSIVSWLLQAFILSREIPLYF 174 D+FA E AA+L+++ WFSLK+ HS + CC+ S ++L + SWL+ AF+L RE+P F Sbjct: 1433 DVFAVERAALLFDICWFSLKSYHSKDNRTICCDLSHVKLQKVASWLMLAFVLCREVPKLF 1492 Query: 175 QKVSKLLATVFLLSTSSERFCLPLY 249 QKVS+LL+ +F LS+SSE F LP Y Sbjct: 1493 QKVSRLLSGIFTLSSSSEHFSLPSY 1517 >ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arabidopsis lyrata subsp. lyrata] gi|297313576|gb|EFH43999.1| hypothetical protein ARALYDRAFT_492569 [Arabidopsis lyrata subsp. lyrata] Length = 2186 Score = 88.6 bits (218), Expect = 5e-16 Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 3/80 (3%) Frame = +1 Query: 4 DLFATECAAILYNLSWFSLKNIH---SGNTCCEFSRIQLPSIVSWLLQAFILSREIPLYF 174 D+FA + A ILYNL W +L+N H S + CC+ I +VSWL+ AF+LSRE+P+ F Sbjct: 1449 DVFAVDRAIILYNLCWLNLRNYHCRDSRSICCDLFHIPFTKLVSWLMLAFVLSREVPILF 1508 Query: 175 QKVSKLLATVFLLSTSSERF 234 QKVS+LLA+++LLS+SS F Sbjct: 1509 QKVSRLLASLYLLSSSSAEF 1528 >ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287|gb|AEE84687.1| separase [Arabidopsis thaliana] Length = 2177 Score = 85.1 bits (209), Expect = 5e-15 Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 3/80 (3%) Frame = +1 Query: 4 DLFATECAAILYNLSWFSLKNIH---SGNTCCEFSRIQLPSIVSWLLQAFILSREIPLYF 174 D+FA + A ILYNL W +L+N H S + CC+ I +VSWL+ AF+LS E+P+ F Sbjct: 1447 DVFAVDRAIILYNLCWLNLRNYHCRKSRSICCDLFHIPFTKLVSWLMLAFVLSGEVPILF 1506 Query: 175 QKVSKLLATVFLLSTSSERF 234 QKVS+LLA+++LLS+S+ F Sbjct: 1507 QKVSRLLASLYLLSSSNSEF 1526