BLASTX nr result

ID: Coptis24_contig00026491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026491
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259...   100   2e-19
emb|CBI23880.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223...    95   5e-18
ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arab...    89   5e-16
ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287...    85   5e-15

>ref|XP_002273874.2| PREDICTED: uncharacterized protein LOC100259948 [Vitis vinifera]
          Length = 2197

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
 Frame = +1

Query: 4    DLFATECAAILYNLSWFSLKNIHSGNT---CCEFSRIQLPSIVSWLLQAFILSREIPLYF 174
            D+F+ E AAI+YN+ WFSLKN  S +T   CC+ S IQ+  IVSWL+ AF+L RE+P+ F
Sbjct: 1476 DVFSVEHAAIIYNICWFSLKNYRSQDTRNICCDQSHIQITKIVSWLMLAFVLCREVPIIF 1535

Query: 175  QKVSKLLATVFLLSTSSERFCLP 243
            QKVS+LLA +++LS SSE F LP
Sbjct: 1536 QKVSRLLAAIYVLSASSEPFSLP 1558


>emb|CBI23880.3| unnamed protein product [Vitis vinifera]
          Length = 2158

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 3/83 (3%)
 Frame = +1

Query: 4    DLFATECAAILYNLSWFSLKNIHSGNT---CCEFSRIQLPSIVSWLLQAFILSREIPLYF 174
            D+F+ E AAI+YN+ WFSLKN  S +T   CC+ S IQ+  IVSWL+ AF+L RE+P+ F
Sbjct: 1423 DVFSVEHAAIIYNICWFSLKNYRSQDTRNICCDQSHIQITKIVSWLMLAFVLCREVPIIF 1482

Query: 175  QKVSKLLATVFLLSTSSERFCLP 243
            QKVS+LLA +++LS SSE F LP
Sbjct: 1483 QKVSRLLAAIYVLSASSEPFSLP 1505


>ref|XP_002529003.1| separase, putative [Ricinus communis] gi|223531543|gb|EEF33373.1|
            separase, putative [Ricinus communis]
          Length = 2153

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/85 (51%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = +1

Query: 4    DLFATECAAILYNLSWFSLKNIHSGNT---CCEFSRIQLPSIVSWLLQAFILSREIPLYF 174
            D+FA E AA+L+++ WFSLK+ HS +    CC+ S ++L  + SWL+ AF+L RE+P  F
Sbjct: 1433 DVFAVERAALLFDICWFSLKSYHSKDNRTICCDLSHVKLQKVASWLMLAFVLCREVPKLF 1492

Query: 175  QKVSKLLATVFLLSTSSERFCLPLY 249
            QKVS+LL+ +F LS+SSE F LP Y
Sbjct: 1493 QKVSRLLSGIFTLSSSSEHFSLPSY 1517


>ref|XP_002867740.1| hypothetical protein ARALYDRAFT_492569 [Arabidopsis lyrata subsp.
            lyrata] gi|297313576|gb|EFH43999.1| hypothetical protein
            ARALYDRAFT_492569 [Arabidopsis lyrata subsp. lyrata]
          Length = 2186

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
 Frame = +1

Query: 4    DLFATECAAILYNLSWFSLKNIH---SGNTCCEFSRIQLPSIVSWLLQAFILSREIPLYF 174
            D+FA + A ILYNL W +L+N H   S + CC+   I    +VSWL+ AF+LSRE+P+ F
Sbjct: 1449 DVFAVDRAIILYNLCWLNLRNYHCRDSRSICCDLFHIPFTKLVSWLMLAFVLSREVPILF 1508

Query: 175  QKVSKLLATVFLLSTSSERF 234
            QKVS+LLA+++LLS+SS  F
Sbjct: 1509 QKVSRLLASLYLLSSSSAEF 1528


>ref|NP_001190804.1| separase [Arabidopsis thaliana] gi|332659287|gb|AEE84687.1| separase
            [Arabidopsis thaliana]
          Length = 2177

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
 Frame = +1

Query: 4    DLFATECAAILYNLSWFSLKNIH---SGNTCCEFSRIQLPSIVSWLLQAFILSREIPLYF 174
            D+FA + A ILYNL W +L+N H   S + CC+   I    +VSWL+ AF+LS E+P+ F
Sbjct: 1447 DVFAVDRAIILYNLCWLNLRNYHCRKSRSICCDLFHIPFTKLVSWLMLAFVLSGEVPILF 1506

Query: 175  QKVSKLLATVFLLSTSSERF 234
            QKVS+LLA+++LLS+S+  F
Sbjct: 1507 QKVSRLLASLYLLSSSNSEF 1526


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