BLASTX nr result

ID: Coptis24_contig00026481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026481
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]    70   1e-10
ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854...    62   4e-08
ref|XP_002315168.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]    62   6e-08
ref|XP_004154889.1| PREDICTED: uncharacterized protein LOC101227...    60   1e-07

>emb|CAN71750.1| hypothetical protein VITISV_040593 [Vitis vinifera]
          Length = 617

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
 Frame = -2

Query: 392 TVPLSFVRRHLENGLGSLILEDSDRRKWPVSFRYYKGHCAHLCSGWPVFVKANRLKLGDV 213
           TVPLSFV+RH +    + IL  SD R W V +   K +     SGW  FV+ N L++GDV
Sbjct: 189 TVPLSFVKRHFKRDNNNTILSVSDGRTWSVKYIKRKNN-VQFSSGWTKFVRDNSLEVGDV 247

Query: 212 CVFE--KIESSLLKVHIIRNHESLTPTTLKMEEGHQSSEK 99
           C FE  K   + LKV I RN+E  T    + ++   S++K
Sbjct: 248 CAFELVKCTGTSLKVEIFRNNEDATHHLQQSQKPMTSTQK 287



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
 Frame = -2

Query: 404 RSYTTVPLSFVRRHLENGLGSLILEDSDRRKWPVSFRYYKG-HCAHLCSGWPVFVKANRL 228
           R   TVP  F++RH      +  L  SD R W  S +Y  G   AH  +GW  F + N L
Sbjct: 525 RHNVTVPFHFLKRHFRTDNTNTTLSVSDGRAW--SIKYIMGARSAHFSAGWRKFAEDNSL 582

Query: 227 KLGDVCVFE--KIESSLLKVHIIRNHE 153
           ++GDVC FE  K   + LKV I R  E
Sbjct: 583 EVGDVCAFELVKCTETSLKVVIFRKKE 609


>ref|XP_003633180.1| PREDICTED: uncharacterized protein LOC100854873 [Vitis vinifera]
          Length = 1020

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = -2

Query: 392  TVPLSFVRRHLENGLGSLILEDSDRRKWPVSFRYYKGHCAHLCSGWPVFVKANRLKLGDV 213
            ++PLSFV+RH +       L  SD R W V +   K       SGW  F + N L++GDV
Sbjct: 930  SIPLSFVKRHFKTDNKKTTLSVSDGRTWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDV 989

Query: 212  CVFE--KIESSLLKVHIIRNHE 153
            C FE  K   + LKV I RN+E
Sbjct: 990  CAFELIKCTGTSLKVVIFRNNE 1011


>ref|XP_002315168.1| predicted protein [Populus trichocarpa] gi|222864208|gb|EEF01339.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
 Frame = -2

Query: 407 FRSYTTVPLSFVRRHLENGLGSLILEDSDRRKWPVSFRYYKGHCAHLCSGWPVFVKANRL 228
           +  +  VPL F +RHL +    + L+ SD R+WP+     +     +  GW  F + N L
Sbjct: 249 YNHFLYVPLEFAQRHLSDAPRCIKLQVSDGREWPIQINRNQCRYLSISKGWNEFSQENNL 308

Query: 227 KLGDVCVFEKI--ESSLLKVHIIRNHESLTPT 138
           K GDVCVFE I  E  +LKV I    E   P+
Sbjct: 309 KEGDVCVFELINKEKFVLKVAIFHELEDNVPS 340


>emb|CAN65918.1| hypothetical protein VITISV_028778 [Vitis vinifera]
          Length = 352

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -2

Query: 392 TVPLSFVRRHLENGLGSLILEDSDRRKWPVSFRYYKGHCAHLCSGWPVFVKANRLKLGDV 213
           ++PLSFV+RH +       L  SD R W V +   K       SGW  F + N L++GDV
Sbjct: 262 SIPLSFVKRHFKTDXNKTTLSVSDGRTWSVKYIIMKKSKVKFSSGWTKFARDNSLEVGDV 321

Query: 212 CVFE--KIESSLLKVHIIRNHE 153
           C FE  K   + LKV I  N+E
Sbjct: 322 CAFELIKCTGTSLKVVIFXNNE 343


>ref|XP_004154889.1| PREDICTED: uncharacterized protein LOC101227407 [Cucumis sativus]
          Length = 202

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
 Frame = -2

Query: 401 SYT-TVPLSFVRRHLENGLGSLILEDSDRRKWPV-SFRYYKGHCAH-LCSGWPVFVKANR 231
           SYT  +P  F   HL +    L+L +     W V S    + H +H LC GW  FV+ N 
Sbjct: 9   SYTLNIPYKFSMAHLPSCKLKLVLHNLKGESWTVNSVPTTRVHTSHTLCGGWMAFVRGND 68

Query: 230 LKLGDVCVFEKIESSLLKVHIIRNHESLTPTTLKMEEGHQSSEKQENSGSV-RIGNRHSC 54
           + +GD+CVFE +    L VHI R              G + SE Q  +GS  R+G  H  
Sbjct: 69  INMGDICVFELVRDCELCVHIFR-------------VGKEMSEDQSGNGSFNRLGTGH-- 113

Query: 53  TKASVPPKVM 24
             A +P K +
Sbjct: 114 --AVIPRKAL 121


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