BLASTX nr result

ID: Coptis24_contig00026477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026477
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...   171   2e-40
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...   165   1e-38
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...   164   3e-38
ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|2...   162   1e-37

>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score =  171 bits (433), Expect = 2e-40
 Identities = 91/261 (34%), Positives = 146/261 (55%), Gaps = 1/261 (0%)
 Frame = -1

Query: 783  NNLYMFSLLETKVKRENFNSISNLCCPFWSHLHNYDSNPSGRIWFFWDPSFVSVNLLKET 604
            N   M  L+ET++K + FN IS++    W  L+NYDS  +GRIW  W+P+ + V  +  +
Sbjct: 544  NKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYDSAANGRIWVSWNPTVLDVKPIASS 603

Query: 603  SQMLHCEVLLMPTNKVFNLSLIYASNGRNERVQLWNEIMNLKNNITLPWCVCGDFNSVLY 424
            +Q +HCEV  + +++ FN   +YA N   +R +LWN I +     +    + GDFN+VL 
Sbjct: 604  AQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKELWNFIAHTSAQNSRNLLIGGDFNNVLL 663

Query: 423  TNETLGMGPVHPRDIEDFSNCVNTSELVDLQFSRSFFTWTDNSDGDGRKCSKIDRCLVNL 244
             ++     PV   +I+DFS+C+  + L +++    ++TW +N     R  SKIDR + N 
Sbjct: 664  VDDRRNGNPVTQHEIQDFSDCLLHNRLSEVRTIGDYYTWCNNQTSGDRIYSKIDRFIANT 723

Query: 243  NWSTNFPASEAEFLPQGVSDHTPMILSW-FNISHKAYPFRFSNSWALHPGFHDIVREAWG 67
            +W   F  +  E LP+GVSDH P+ +      S K  PFRF N    H  F  +++E WG
Sbjct: 724  SWLQKFTNAVGEVLPKGVSDHCPISMDMSCPASPKNTPFRFINVLTDHHLFPALIQEKWG 783

Query: 66   W*PHHYSLLKAEELEAHSEGV 4
              P+ +++++ E LE  S+ V
Sbjct: 784  --PNLHTMVQVESLEKRSKRV 802


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  165 bits (417), Expect = 1e-38
 Identities = 84/236 (35%), Positives = 133/236 (56%), Gaps = 2/236 (0%)
 Frame = -1

Query: 771 MFSLLETKVKRENFNSISNLCCPFWSHLHNYDSNPSGRIWFFWDPSFVSVNLLKETSQML 592
           +F L+ET+VK +N +++S L    WS L+NYD +  GRIW  W+   V V++   + Q +
Sbjct: 31  LFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAI 90

Query: 591 HCEVLLMPTNKVFNLSLIYASNGRNERVQLWNEIMNLKNN-ITLPWCVCGDFNSVLYTNE 415
           H  V ++ TN  FN S+IY  N  + R  LW++I++  +   + PW + GDFN++   ++
Sbjct: 91  HVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSD 150

Query: 414 TLGMGPVHPRDIEDFSNCVNTSELVDLQFSRSFFTWTDNSDGDGRKCSKIDRCLVNLNWS 235
            LG        +     C+  +++ DL +S   +TW+ N   +     K+DR LVN  W+
Sbjct: 151 KLGGSTTWAGTMHRLDTCIREAKVDDLWYSGMHYTWS-NQCPENLIMRKLDRVLVNEKWN 209

Query: 234 TNFPASEAEFLPQGVSDHTPMILSWF-NISHKAYPFRFSNSWALHPGFHDIVREAW 70
            NFP SEA FLP G+SDH+PM++    N  +   PFRF + W  H  F  +V++ W
Sbjct: 210 LNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMPLVKKVW 265


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
            predicted protein [Populus trichocarpa]
          Length = 809

 Score =  164 bits (415), Expect = 2e-38
 Identities = 83/236 (35%), Positives = 134/236 (56%), Gaps = 2/236 (0%)
 Frame = -1

Query: 771  MFSLLETKVKRENFNSISNLCCPFWSHLHNYDSNPSGRIWFFWDPSFVSVNLLKETSQML 592
            +F L+ET+VK +N +++S L    WS L+NYD +  GRIW  W+   V V++   + Q +
Sbjct: 555  LFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVYGMSDQAI 614

Query: 591  HCEVLLMPTNKVFNLSLIYASNGRNERVQLWNEIMNLKNN-ITLPWCVCGDFNSVLYTNE 415
            H  V ++ TN  FN S+IY  N  + R  LW++I++  +   + PW + GDFN++   ++
Sbjct: 615  HVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSD 674

Query: 414  TLGMGPVHPRDIEDFSNCVNTSELVDLQFSRSFFTWTDNSDGDGRKCSKIDRCLVNLNWS 235
             LG        ++    C+  +++ DL++S   +TW+ N   +     K+DR LVN  W+
Sbjct: 675  RLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWS-NQCPENLIMRKLDRVLVNEKWN 733

Query: 234  TNFPASEAEFLPQGVSDHTPMILSWF-NISHKAYPFRFSNSWALHPGFHDIVREAW 70
              FP SEA FLP G+SDH+PM++    N  +   PFRF + W  H  F  +V++ W
Sbjct: 734  LKFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMPLVKKVW 789


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score =  164 bits (414), Expect = 3e-38
 Identities = 83/236 (35%), Positives = 134/236 (56%), Gaps = 2/236 (0%)
 Frame = -1

Query: 771  MFSLLETKVKRENFNSISNLCCPFWSHLHNYDSNPSGRIWFFWDPSFVSVNLLKETSQML 592
            +F L+ET+VK +N +++S L    WS L+NYD +  GRIW  W+   V V++   + Q +
Sbjct: 408  LFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAI 467

Query: 591  HCEVLLMPTNKVFNLSLIYASNGRNERVQLWNEIMNLKNN-ITLPWCVCGDFNSVLYTNE 415
            H  V ++ TN  FN S+IY  N  + R  LW++I++  +   +  W + GDFN++   ++
Sbjct: 468  HVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTLWILIGDFNAIRNQSD 527

Query: 414  TLGMGPVHPRDIEDFSNCVNTSELVDLQFSRSFFTWTDNSDGDGRKCSKIDRCLVNLNWS 235
             LG        ++    C+  +++ DL++S   +TW+ N   +     K+DR LVN  W+
Sbjct: 528  RLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWS-NQCPENLIMRKLDRVLVNEKWN 586

Query: 234  TNFPASEAEFLPQGVSDHTPMILSWF-NISHKAYPFRFSNSWALHPGFHDIVREAW 70
              FP SEA FLP G+SDH+PM++    N  +K  PFRF + W  H  F  +V++ W
Sbjct: 587  LKFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVW 642


>ref|XP_002332212.1| predicted protein [Populus trichocarpa] gi|222874876|gb|EEF12007.1|
            predicted protein [Populus trichocarpa]
          Length = 603

 Score =  162 bits (409), Expect = 1e-37
 Identities = 83/234 (35%), Positives = 133/234 (56%), Gaps = 2/234 (0%)
 Frame = -1

Query: 771  MFSLLETKVKRENFNSISNLCCPFWSHLHNYDSNPSGRIWFFWDPSFVSVNLLKETSQML 592
            +F L+ET+VK +N +++S L    WS L+NYD +  GRIW  W+   V V++   + Q +
Sbjct: 348  LFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSCHGRIWVCWNADTVKVDVFGMSDQAI 407

Query: 591  HCEVLLMPTNKVFNLSLIYASNGRNERVQLWNEIMNLKNN-ITLPWCVCGDFNSVLYTNE 415
            H  V ++ TN  FN S+IY  N  + R  LW++I++  +   + PW + GDFN++   ++
Sbjct: 408  HVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSD 467

Query: 414  TLGMGPVHPRDIEDFSNCVNTSELVDLQFSRSFFTWTDNSDGDGRKCSKIDRCLVNLNWS 235
             LG        ++    C+  +++ DL++S   +TW  N   +     K+DR LVN  W+
Sbjct: 468  RLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWL-NQCPENLIMRKLDRVLVNEKWN 526

Query: 234  TNFPASEAEFLPQGVSDHTPMILSWF-NISHKAYPFRFSNSWALHPGFHDIVRE 76
             NFP SEA FLP G+SDH+PM++    N  +   PFRF + W  H  F  +V++
Sbjct: 527  LNFPLSEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMPLVKK 580


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