BLASTX nr result
ID: Coptis24_contig00026458
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026458 (481 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277684.1| PREDICTED: uncharacterized protein LOC100257... 61 1e-07 ref|XP_003529839.1| PREDICTED: uncharacterized protein LOC100808... 58 7e-07 ref|XP_002331180.1| predicted protein [Populus trichocarpa] gi|2... 55 5e-06 ref|XP_002304121.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_002277684.1| PREDICTED: uncharacterized protein LOC100257848 [Vitis vinifera] Length = 266 Score = 60.8 bits (146), Expect = 1e-07 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%) Frame = +3 Query: 213 LLRTLLHKKIYPQKSS-TILVKKYLGDRHSSKNNKDDQ*EEKRDTGCKWVNTDSK 374 +LR LLHKKIYPQ SS T+ + +YL +RH K++ +D+ EK G KWV TDS+ Sbjct: 206 ILRLLLHKKIYPQSSSSTLSIMRYLANRHMPKSDNEDEVNEKVTEGSKWVKTDSE 260 >ref|XP_003529839.1| PREDICTED: uncharacterized protein LOC100808146 [Glycine max] Length = 263 Score = 58.2 bits (139), Expect = 7e-07 Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%) Frame = +3 Query: 213 LLRTLLHKKIYPQKSS-TILVKKYLGDRHSSKNNKDDQ*EEKRDTGCKWVNTDSK 374 LLRT+LHKKIY Q SS + LVKK + D+ ++ +D+ +E+ GCKWV TDS+ Sbjct: 203 LLRTMLHKKIYTQNSSRSPLVKKGIEDKKMTRKRNEDESDERNGDGCKWVKTDSE 257 >ref|XP_002331180.1| predicted protein [Populus trichocarpa] gi|222873301|gb|EEF10432.1| predicted protein [Populus trichocarpa] Length = 312 Score = 55.5 bits (132), Expect = 5e-06 Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 2/65 (3%) Frame = +3 Query: 213 LLRTLLHKKIYPQKSST-ILVKKYLGDRHSSKNNK-DDQ*EEKRDTGCKWVNTDSKSKVF 386 LLRTLLHKKI PQ +S +KKY+ D+ SK K DD+ + K G KWV TDS+ K F Sbjct: 209 LLRTLLHKKINPQSTSRPSSMKKYIEDKKISKKEKEDDEKQYKTSDGSKWVKTDSECK-F 267 Query: 387 LLHLL 401 + LL Sbjct: 268 IFSLL 272 >ref|XP_002304121.1| predicted protein [Populus trichocarpa] gi|222841553|gb|EEE79100.1| predicted protein [Populus trichocarpa] Length = 254 Score = 55.1 bits (131), Expect = 6e-06 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 2/56 (3%) Frame = +3 Query: 213 LLRTLLHKKIYPQKSS-TILVKKYLGDRHSSKNNK-DDQ*EEKRDTGCKWVNTDSK 374 LLRTLLHKKI PQ +S +KKY+ DR + K +K DD+ +K G KWV TDS+ Sbjct: 193 LLRTLLHKKINPQSTSRASSMKKYIEDRSTPKKDKEDDEKRDKTSNGSKWVKTDSE 248