BLASTX nr result

ID: Coptis24_contig00026452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026452
         (1448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24693.1| unknown [Picea sitchensis]                             255   2e-65
ref|XP_003525958.1| PREDICTED: DAZ-associated protein 1-like [Gl...   250   6e-64
ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|2...   240   8e-61
ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleop...   238   3e-60
ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805...   238   3e-60

>gb|ABK24693.1| unknown [Picea sitchensis]
          Length = 476

 Score =  255 bits (651), Expect = 2e-65
 Identities = 129/216 (59%), Positives = 157/216 (72%)
 Frame = -2

Query: 1318 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 1139
            MDSD  K+F+GGIS+ET EE LRD+FSKYGEV+ TVIM+DR+T R RGFGFVVF+DPS+V
Sbjct: 1    MDSDHCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIV 60

Query: 1138 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXNTQFRSK 959
            D AL+E H I  R VE KKAVPR EQ     NS     S+G+G              R+K
Sbjct: 61   DIALQEKHTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYG----------GGSVRTK 110

Query: 958  KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 779
            KIFVGGL A++TEE+F+ YF++FG ITDVVVMYD  T RPRGFGFI+FDSE+AVESV+Q 
Sbjct: 111  KIFVGGLPANLTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQK 170

Query: 778  NFHELNNKSVEVKRAVPKDAATNSGRNHANSHNMRN 671
            +FH+LN K VEVKRA+PKDA+  +    A  +   N
Sbjct: 171  SFHQLNEKLVEVKRALPKDASPGAAGRGAGGYQGYN 206


>ref|XP_003525958.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
          Length = 378

 Score =  250 bits (639), Expect = 6e-64
 Identities = 158/388 (40%), Positives = 213/388 (54%), Gaps = 23/388 (5%)
 Frame = -2

Query: 1321 KMDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSV 1142
            KMDSD+ KLFVGGIS +T E+ L+ HF+KYG V D+ I  DR T  PRGFGFV F+D S 
Sbjct: 4    KMDSDRAKLFVGGISRDTTEDVLKLHFAKYGVVSDSTISVDRTTRSPRGFGFVTFSDLSA 63

Query: 1141 VDQALEENHVICSRTVEVKKAVPRGEQHQH----------YHNSNQEQHSRGFGRKXXXX 992
             D+AL++ HVI  RTVEVKKA+PR EQHQH          Y+N+N   ++          
Sbjct: 64   ADKALQDTHVILGRTVEVKKAIPRSEQHQHQNQLQSRVGGYYNNNNNNNNN------YSN 117

Query: 991  XXXXNTQFRSKKIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFD 812
                +   R+KKIFVGGL A ++EEEF+ YFE+FGRITDVVVM DS THRPRGFGFITF+
Sbjct: 118  DCSSDYNVRTKKIFVGGLPAGISEEEFKNYFERFGRITDVVVMQDSVTHRPRGFGFITFE 177

Query: 811  SEEAVESVMQNNFHELNNKSVEVKRAVPKDAATNSGRNHANSHNMRNGEXXXXXXXXXXX 632
            SE++V++VM  +FH+LN + VEVKRAVPK+   N G +  +    ++             
Sbjct: 178  SEDSVQNVMVKSFHDLNGRQVEVKRAVPKEG--NHGYDGFSKFRNKS-------ERGVPK 228

Query: 631  XYPTYNPMYNLYTGYGPRP----------VASXXXXXXXXXXXXXXXXXXXXXXPRSPWN 482
              P Y+P  N++ G+ P P           ++                      PR+ W 
Sbjct: 229  SLPPYSPR-NMFPGFSPSPWYSGDGVYAYGSNAYGCWYPVGGYGGNGYAVLCDAPRNFWY 287

Query: 481  GPGIVGLRRGLVPYVNA-PFHPXXXXXXXXXXXGMTTADYHGIMGPDTNGKWNQGSSGDM 305
            GP + G +   VPY +A P              G  +  Y GI+GP TN K++Q  + + 
Sbjct: 288  GPMMTGPQACQVPYTSAVPDVVYVGGRIGVVGSGAGSWGYSGILGPATNLKFDQAFNANG 347

Query: 304  QLSAGTSPMRLDGGISED--DSSGLMGS 227
             +    + +    G+ +D  DSS L GS
Sbjct: 348  FVPGNVTSLH---GVQQDVIDSSSLKGS 372


>ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|222847614|gb|EEE85161.1|
            predicted protein [Populus trichocarpa]
          Length = 478

 Score =  240 bits (612), Expect = 8e-61
 Identities = 123/213 (57%), Positives = 153/213 (71%)
 Frame = -2

Query: 1318 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 1139
            M+SD GKLF+GGIS++T EE L+++FSKYGEV++ VIMRDRVT R RGFGFVVFADP V 
Sbjct: 1    MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVA 60

Query: 1138 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXNTQFRSK 959
            ++ + E HV+  RTVE KKAVPR +QH    N++    S G G              R+K
Sbjct: 61   ERVIMEKHVVDGRTVEAKKAVPRDDQHILSRNTSSIHGSPGPG--------------RTK 106

Query: 958  KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 779
            KIFVGGL+++VTE +F+ YFE+FG ITDVVVMYD  T RPRGFGFIT+DSEEAV+ V+  
Sbjct: 107  KIFVGGLASTVTENDFKKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHK 166

Query: 778  NFHELNNKSVEVKRAVPKDAATNSGRNHANSHN 680
             FHELN K VEVKRAVPK+ +    R+    +N
Sbjct: 167  TFHELNGKMVEVKRAVPKELSPGPSRSPLMGYN 199


>ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
            sativus]
          Length = 462

 Score =  238 bits (607), Expect = 3e-60
 Identities = 117/205 (57%), Positives = 148/205 (72%)
 Frame = -2

Query: 1318 MDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSVV 1139
            MDSDQGKLF+GGIS+ET E+ L+D+FS YGEV+ TV+MRD++TSRPRGFGFVVF+DPSV+
Sbjct: 1    MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 1138 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXNTQFRSK 959
            D+ L++ H I  +TVE K+A+ R EQ      SN    + G                R+K
Sbjct: 61   DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNGRNSG---------GSGGGNMRTK 111

Query: 958  KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 779
            KIFVGGL  ++TEE F+ YFE +G +TDVVVMYD  T RPRGFGFI+FD+EEAV+ V+  
Sbjct: 112  KIFVGGLPPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHK 171

Query: 778  NFHELNNKSVEVKRAVPKDAATNSG 704
             FH+LN K VEVKRA+PKDA   +G
Sbjct: 172  TFHDLNGKQVEVKRALPKDANPGAG 196


>ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
          Length = 513

 Score =  238 bits (607), Expect = 3e-60
 Identities = 121/214 (56%), Positives = 150/214 (70%)
 Frame = -2

Query: 1321 KMDSDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRVTSRPRGFGFVVFADPSV 1142
            KM+SD GKLF+GGIS++T EE L+++F KYGEVI+TVIMRDRVT R RGFGFVVF DPSV
Sbjct: 34   KMESDLGKLFIGGISWDTDEERLKEYFGKYGEVIETVIMRDRVTGRARGFGFVVFGDPSV 93

Query: 1141 VDQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXNTQFRS 962
             ++ + + H+I  RTVE KKAVPR +Q      S     S G G              R+
Sbjct: 94   AERVIMDKHIIDGRTVEAKKAVPRDDQQNINRQSGSAHVSPGPG--------------RT 139

Query: 961  KKIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQ 782
            KKIFVGGL +++TE +F+ YF++FG ITDVVVMYD  T RPRGFGFIT+DSEEAV+ V+ 
Sbjct: 140  KKIFVGGLPSTITESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLY 199

Query: 781  NNFHELNNKSVEVKRAVPKDAATNSGRNHANSHN 680
              FHELN K VEVKRAVPK+ +    R+    +N
Sbjct: 200  KTFHELNGKMVEVKRAVPKELSPGPSRSPLIGYN 233


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