BLASTX nr result
ID: Coptis24_contig00026447
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026447 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|2... 74 1e-11 emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera] 70 2e-10 ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|2... 70 2e-10 ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|2... 69 3e-10 emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 69 5e-10 >ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|222849376|gb|EEE86923.1| predicted protein [Populus trichocarpa] Length = 371 Score = 73.9 bits (180), Expect = 1e-11 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Frame = +3 Query: 12 EKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKL------CLSTSCQGTEWVVN 173 +K + +D + K GRD G ++SDGD C++ +CQ T WV + Sbjct: 244 DKPGHMQKDCRKYKRDKKGRDEDKNEENGTAAVVSDGDVAIVCDDGCVNLACQDTTWVAD 303 Query: 174 TGASYHVTPHESFFTTYKSSDFGEVKMDNNG 266 + ASYHVTP F+T+Y + DFG+V+M N G Sbjct: 304 SAASYHVTPRHDFYTSYTAGDFGQVRMGNQG 334 >emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera] Length = 1392 Score = 70.1 bits (170), Expect = 2e-10 Identities = 36/88 (40%), Positives = 50/88 (56%) Frame = +3 Query: 3 KRDEKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKLCLSTSCQGTEWVVNTGA 182 KRD K V E K G D V+ + + I+ D D ++ +CQ T WV+++GA Sbjct: 114 KRDMKQEKVKEKK----NDNGGEDDQVVTTTSDFLIVYDSD--VVNFACQETSWVIDSGA 167 Query: 183 SYHVTPHESFFTTYKSSDFGEVKMDNNG 266 S H TP + FFT+Y S DFG V+M N+G Sbjct: 168 SIHATPRKDFFTSYTSGDFGSVRMGNDG 195 >ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|222863429|gb|EEF00560.1| predicted protein [Populus trichocarpa] Length = 341 Score = 69.7 bits (169), Expect = 2e-10 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 6/89 (6%) Frame = +3 Query: 12 EKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKL------CLSTSCQGTEWVVN 173 +K + +D + K GRD G ++ DGD C++ +CQ T WV + Sbjct: 244 DKPGHIQKDCRKYKRDKKGRDEDKNEENGTAAVVFDGDVAIVCDDSCVNLACQDTTWVAD 303 Query: 174 TGASYHVTPHESFFTTYKSSDFGEVKMDN 260 + ASYHVTP F+T+Y + DFG+V+M N Sbjct: 304 SAASYHVTPRRDFYTSYTACDFGQVRMGN 332 >ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|222838791|gb|EEE77142.1| predicted protein [Populus trichocarpa] Length = 207 Score = 69.3 bits (168), Expect = 3e-10 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 6/89 (6%) Frame = +3 Query: 12 EKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKL------CLSTSCQGTEWVVN 173 +K + +D + K GRD G ++ DGD C++ +CQ T WV + Sbjct: 111 DKPGHMQKDCRKYKRDKKGRDEDKNEENGTAAVVFDGDVAIVCDDGCVNLACQDTTWVAD 170 Query: 174 TGASYHVTPHESFFTTYKSSDFGEVKMDN 260 + ASYHVTP F+T+Y + DFG+V+M N Sbjct: 171 SAASYHVTPRRDFYTSYTAGDFGQVRMGN 199 >emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] Length = 1317 Score = 68.6 bits (166), Expect = 5e-10 Identities = 36/88 (40%), Positives = 49/88 (55%) Frame = +3 Query: 3 KRDEKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKLCLSTSCQGTEWVVNTGA 182 KRD K V E K G D V + + I+ D D ++ +CQ T WV+++GA Sbjct: 224 KRDMKQGKVKEKK----NDNGGEDDQVATTTSDFLIVYDSD--VVNFACQETSWVIDSGA 277 Query: 183 SYHVTPHESFFTTYKSSDFGEVKMDNNG 266 S H TP + FFT+Y S DFG V+M N+G Sbjct: 278 SIHATPRKDFFTSYTSGDFGSVRMGNDG 305