BLASTX nr result

ID: Coptis24_contig00026447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026447
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera]    70   2e-10
ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]    69   5e-10

>ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|222849376|gb|EEE86923.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
 Frame = +3

Query: 12  EKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKL------CLSTSCQGTEWVVN 173
           +K   + +D  + K    GRD       G   ++SDGD        C++ +CQ T WV +
Sbjct: 244 DKPGHMQKDCRKYKRDKKGRDEDKNEENGTAAVVSDGDVAIVCDDGCVNLACQDTTWVAD 303

Query: 174 TGASYHVTPHESFFTTYKSSDFGEVKMDNNG 266
           + ASYHVTP   F+T+Y + DFG+V+M N G
Sbjct: 304 SAASYHVTPRHDFYTSYTAGDFGQVRMGNQG 334


>emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera]
          Length = 1392

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/88 (40%), Positives = 50/88 (56%)
 Frame = +3

Query: 3   KRDEKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKLCLSTSCQGTEWVVNTGA 182
           KRD K   V E K        G D  V+ +  +  I+ D D   ++ +CQ T WV+++GA
Sbjct: 114 KRDMKQEKVKEKK----NDNGGEDDQVVTTTSDFLIVYDSD--VVNFACQETSWVIDSGA 167

Query: 183 SYHVTPHESFFTTYKSSDFGEVKMDNNG 266
           S H TP + FFT+Y S DFG V+M N+G
Sbjct: 168 SIHATPRKDFFTSYTSGDFGSVRMGNDG 195


>ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|222863429|gb|EEF00560.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
 Frame = +3

Query: 12  EKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKL------CLSTSCQGTEWVVN 173
           +K   + +D  + K    GRD       G   ++ DGD        C++ +CQ T WV +
Sbjct: 244 DKPGHIQKDCRKYKRDKKGRDEDKNEENGTAAVVFDGDVAIVCDDSCVNLACQDTTWVAD 303

Query: 174 TGASYHVTPHESFFTTYKSSDFGEVKMDN 260
           + ASYHVTP   F+T+Y + DFG+V+M N
Sbjct: 304 SAASYHVTPRRDFYTSYTACDFGQVRMGN 332


>ref|XP_002333859.1| predicted protein [Populus trichocarpa] gi|222838791|gb|EEE77142.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
 Frame = +3

Query: 12  EKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKL------CLSTSCQGTEWVVN 173
           +K   + +D  + K    GRD       G   ++ DGD        C++ +CQ T WV +
Sbjct: 111 DKPGHMQKDCRKYKRDKKGRDEDKNEENGTAAVVFDGDVAIVCDDGCVNLACQDTTWVAD 170

Query: 174 TGASYHVTPHESFFTTYKSSDFGEVKMDN 260
           + ASYHVTP   F+T+Y + DFG+V+M N
Sbjct: 171 SAASYHVTPRRDFYTSYTAGDFGQVRMGN 199


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/88 (40%), Positives = 49/88 (55%)
 Frame = +3

Query: 3   KRDEKTSTVHEDKLELKESTTGRDTTVIASEGEVGIISDGDKLCLSTSCQGTEWVVNTGA 182
           KRD K   V E K        G D  V  +  +  I+ D D   ++ +CQ T WV+++GA
Sbjct: 224 KRDMKQGKVKEKK----NDNGGEDDQVATTTSDFLIVYDSD--VVNFACQETSWVIDSGA 277

Query: 183 SYHVTPHESFFTTYKSSDFGEVKMDNNG 266
           S H TP + FFT+Y S DFG V+M N+G
Sbjct: 278 SIHATPRKDFFTSYTSGDFGSVRMGNDG 305


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