BLASTX nr result

ID: Coptis24_contig00026443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026443
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525998.1| Myosin heavy chain, clone, putative [Ricinus...    98   6e-19
ref|XP_002315855.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002311531.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_004170227.1| PREDICTED: microtubule-associated protein 70...    98   8e-19
ref|XP_004170226.1| PREDICTED: microtubule-associated protein 70...    98   8e-19

>ref|XP_002525998.1| Myosin heavy chain, clone, putative [Ricinus communis]
           gi|223534730|gb|EEF36422.1| Myosin heavy chain, clone,
           putative [Ricinus communis]
          Length = 614

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 61/117 (52%), Positives = 75/117 (64%)
 Frame = +2

Query: 2   LAKASMVDDLQNKNQDLSKQIEICQEENKIVDKMHRQKVAEVEKLGQTVREYDDIEILHN 181
           LAKASMVDDLQNKNQ+L KQIEICQEENKI+DKMHRQKVAEVEKL QTVRE ++  +   
Sbjct: 224 LAKASMVDDLQNKNQELMKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVL--- 280

Query: 182 LNVRGYIVIIFLCSYIFGYCRMRDNS*SANRELARAMPTCESSHSCSRSNKRRDANN 352
               G      +  Y      M +   + +RELARA  T     +   +N+ +DAN+
Sbjct: 281 ---AGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVATVV-ANEWKDAND 333


>ref|XP_002315855.1| predicted protein [Populus trichocarpa] gi|222864895|gb|EEF02026.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 61/117 (52%), Positives = 75/117 (64%)
 Frame = +2

Query: 2   LAKASMVDDLQNKNQDLSKQIEICQEENKIVDKMHRQKVAEVEKLGQTVREYDDIEILHN 181
           LAKASMVDDLQNKNQ+L KQIEICQEENKI+DKMHRQKVAEVEKL QTVRE ++  +   
Sbjct: 219 LAKASMVDDLQNKNQELMKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVL--- 275

Query: 182 LNVRGYIVIIFLCSYIFGYCRMRDNS*SANRELARAMPTCESSHSCSRSNKRRDANN 352
               G      +  Y      M +   + +RELARA  T     +   +N+ +DAN+
Sbjct: 276 ---AGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVATVV-ANEWKDAND 328


>ref|XP_002311531.1| predicted protein [Populus trichocarpa] gi|222851351|gb|EEE88898.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 61/117 (52%), Positives = 75/117 (64%)
 Frame = +2

Query: 2   LAKASMVDDLQNKNQDLSKQIEICQEENKIVDKMHRQKVAEVEKLGQTVREYDDIEILHN 181
           LAKASMVDDLQNKNQ+L KQIEICQEENKI+DKMHRQKVAEVEKL QTVRE ++  +   
Sbjct: 219 LAKASMVDDLQNKNQELMKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVL--- 275

Query: 182 LNVRGYIVIIFLCSYIFGYCRMRDNS*SANRELARAMPTCESSHSCSRSNKRRDANN 352
               G      +  Y      M +   + +RELARA  T     +   +N+ +DAN+
Sbjct: 276 ---AGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTANRVATVV-ANEWKDAND 328


>ref|XP_004170227.1| PREDICTED: microtubule-associated protein 70-1-like isoform 2
           [Cucumis sativus]
          Length = 610

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 61/117 (52%), Positives = 76/117 (64%)
 Frame = +2

Query: 2   LAKASMVDDLQNKNQDLSKQIEICQEENKIVDKMHRQKVAEVEKLGQTVREYDDIEILHN 181
           LAKASMVDDLQNKNQ+L KQIEICQEENKI+DKMHRQKVAEVEKL QTVRE ++  +   
Sbjct: 206 LAKASMVDDLQNKNQELMKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVL--- 262

Query: 182 LNVRGYIVIIFLCSYIFGYCRMRDNS*SANRELARAMPTCESSHSCSRSNKRRDANN 352
               G      +  Y      M +   + +RELARA  T  +  +   +N+ +DAN+
Sbjct: 263 ---AGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTA-NRVAVVVANEWKDAND 315


>ref|XP_004170226.1| PREDICTED: microtubule-associated protein 70-1-like isoform 1
           [Cucumis sativus]
          Length = 619

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 61/117 (52%), Positives = 76/117 (64%)
 Frame = +2

Query: 2   LAKASMVDDLQNKNQDLSKQIEICQEENKIVDKMHRQKVAEVEKLGQTVREYDDIEILHN 181
           LAKASMVDDLQNKNQ+L KQIEICQEENKI+DKMHRQKVAEVEKL QTVRE ++  +   
Sbjct: 227 LAKASMVDDLQNKNQELMKQIEICQEENKILDKMHRQKVAEVEKLTQTVRELEEAVL--- 283

Query: 182 LNVRGYIVIIFLCSYIFGYCRMRDNS*SANRELARAMPTCESSHSCSRSNKRRDANN 352
               G      +  Y      M +   + +RELARA  T  +  +   +N+ +DAN+
Sbjct: 284 ---AGGAAANAVRDYQRKVQEMNEERKTLDRELARAKVTA-NRVAVVVANEWKDAND 336


Top