BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026440
         (1375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...   286   7e-75
emb|CBI38961.3| unnamed protein product [Vitis vinifera]              274   4e-71
ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containin...   229   2e-57
ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containin...   222   2e-55
ref|NP_001185401.1| zinc finger CCCH domain-containing protein 1...   213   9e-53

>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like [Vitis
            vinifera]
          Length = 383

 Score =  286 bits (733), Expect = 7e-75
 Identities = 164/378 (43%), Positives = 209/378 (55%), Gaps = 18/378 (4%)
 Frame = +3

Query: 6    CRNFASGSCRFGDRCKFSH--------DIHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 161
            CRNF  GSC++G+RCKF H        ++                               
Sbjct: 8    CRNFQRGSCQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPFGFGVQSN 67

Query: 162  XXXXXXENTWTRGEPAGT---NVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERPIW 332
                  EN WTR  P  T   + + + S++Q   +NH C DPESCK  IV+DF+ ERPIW
Sbjct: 68   SLPKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCKRQIVEDFEHERPIW 127

Query: 333  KLTCYAHWRHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQ 512
            KLTCY H +  PCDI GD+SYEELR AAYDDA +GLSL S+VERER++LNSK+++F++L 
Sbjct: 128  KLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERERSLLNSKLIEFDSLL 187

Query: 513  RNPYVISPNTTIGGAIPFPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVAST 692
            R PY   PN+T+  AI  PA N  A     Q N PPS SSFSQL    N G  T     +
Sbjct: 188  RKPYAAPPNSTL--AIQSPAPNPDASSLTAQNNTPPSASSFSQLSTSPNMGFGTRPSTPS 245

Query: 693  NSIFGQKSVPPVSTQPSGSFGSNNLTFGTQGLFGSQQHTQQQGN---GNASSF-NMPFSS 860
            N+ FGQ +    S+Q SG+FG+NNL FG  G FGSQ   Q  G+    N + F +   S+
Sbjct: 246  NNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSPLPSNTAGFSHNNMSA 305

Query: 861  GKNNPTSFAGSFQSSDVAVNQSPVLSVGHNPPASLGGQTYVD---RSPEGVPAEMAIWLK 1031
            G    +  A S Q    A NQSP+LS G N   S     +        +    +M+IWLK
Sbjct: 306  GSKAFSPPAASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIWLK 365

Query: 1032 EKWNPGEIPEEAPPDSYV 1085
            E+WNPGEIPEE PPD++V
Sbjct: 366  EEWNPGEIPEEEPPDAFV 383


>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  274 bits (700), Expect = 4e-71
 Identities = 151/312 (48%), Positives = 191/312 (61%), Gaps = 10/312 (3%)
 Frame = +3

Query: 180  ENTWTRGEPAGT---NVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERPIWKLTCYA 350
            EN WTR  P  T   + + + S++Q   +NH C DPESCK  IV+DF+ ERPIWKLTCY 
Sbjct: 85   ENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCKRQIVEDFEHERPIWKLTCYG 144

Query: 351  HWRHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYVI 530
            H +  PCDI GD+SYEELR AAYDDA +GLSL S+VERER++LNSK+++F++L R PY  
Sbjct: 145  HCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERERSLLNSKLIEFDSLLRKPYAA 204

Query: 531  SPNTTIGGAIPFPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVASTNSIFGQ 710
             PN+T+  AI  PA N  A     Q N PPS SSFSQL    N G  T     +N+ FGQ
Sbjct: 205  PPNSTL--AIQSPAPNPDASSLTAQNNTPPSASSFSQLSTSPNMGFGTRPSTPSNNAFGQ 262

Query: 711  KSVPPVSTQPSGSFGSNNLTFGTQGLFGSQQHTQQQGN---GNASSF-NMPFSSGKNNPT 878
             +    S+Q SG+FG+NNL FG  G FGSQ   Q  G+    N + F +   S+G    +
Sbjct: 263  SNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSPLPSNTAGFSHNNMSAGSKAFS 322

Query: 879  SFAGSFQSSDVAVNQSPVLSVGHNPPASLGGQTYVD---RSPEGVPAEMAIWLKEKWNPG 1049
              A S Q    A NQSP+LS G N   S     +        +    +M+IWLKE+WNPG
Sbjct: 323  PPAASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIWLKEEWNPG 382

Query: 1050 EIPEEAPPDSYV 1085
            EIPEE PPD++V
Sbjct: 383  EIPEEEPPDAFV 394


>ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Cucumis sativus]
          Length = 360

 Score =  229 bits (583), Expect = 2e-57
 Identities = 138/363 (38%), Positives = 177/363 (48%), Gaps = 3/363 (0%)
 Frame = +3

Query: 6    CRNFASGSCRFGDRCKFSHDIHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEN 185
            CR+F  G+C++G+RCKF H                                       EN
Sbjct: 8    CRDFQRGTCQYGERCKFLHATQQAQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFEN 67

Query: 186  TWTR-GEPAGTNVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERPIWKLTCYAHWRH 362
             WTR   PAG   +++P N   P SNH C D ESCK  I +DF+ ERP+WKLTCY H ++
Sbjct: 68   KWTRPSTPAGNAQSRKPDN-HLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKN 126

Query: 363  LPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYVISPNT 542
             PCDI GDVSYEELR  AYD+AK+G+SL S+VERERN+LNSK+ +FE L   PYV   N 
Sbjct: 127  EPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLLKPYVTPSNR 186

Query: 543  TIGGAIPFPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVASTNSIFGQKSVP 722
              G    F   N+ +   P  +N  PS+SSFSQLG   N G         N++FGQ+   
Sbjct: 187  APGNQSSFSGTNSPSI-LPSAQNNTPSLSSFSQLGASLNTGFGARPSNPHNTVFGQQVQF 245

Query: 723  PVSTQPSGSFGSNNLTFGTQGLFGSQQHTQQQGNGNASSFNMPFSSGKNNPTSFAGSFQS 902
                Q S  FG  N    +    G    +Q  GN         FS+        AGS   
Sbjct: 246  SSPVQNSSGFGMTNFPSTSVVAVGGGVGSQTFGN---------FSTLSGFDIKNAGSNIF 296

Query: 903  SDVAVNQSPVLSVGHNPPASL--GGQTYVDRSPEGVPAEMAIWLKEKWNPGEIPEEAPPD 1076
            S  A+   P  +   +    +    Q       E    ++ IW+KEKW PGEIPE APPD
Sbjct: 297  SSAALTNLPPTNANSSASGQIAPNAQLVNKLQQENSSVDVDIWMKEKWVPGEIPEMAPPD 356

Query: 1077 SYV 1085
            + +
Sbjct: 357  AVI 359


>ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Cucumis sativus]
          Length = 377

 Score =  222 bits (565), Expect = 2e-55
 Identities = 135/356 (37%), Positives = 172/356 (48%), Gaps = 3/356 (0%)
 Frame = +3

Query: 27   SCRFGDRCKFSHDIHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENTWTR-GE 203
            SC++G+RCKF H                                       EN WTR   
Sbjct: 32   SCQYGERCKFLHATQQAQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPST 91

Query: 204  PAGTNVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERPIWKLTCYAHWRHLPCDIWG 383
            P G   +++P N   P SNH C D ESCK  I +DF+ ERP+WKLTCY H ++ PCDI G
Sbjct: 92   PTGNAQSRKPDN-HLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVG 150

Query: 384  DVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYVISPNTTIGGAIP 563
            DVSYEELR  AYD+AK+G+SL S+VERERN+LNSK+ +FE L   PYV   N   G    
Sbjct: 151  DVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLLKPYVTPSNRAPGNQSS 210

Query: 564  FPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVASTNSIFGQKSVPPVSTQPS 743
            F   N+ +   P  +N  PS+SSFSQLG   N G         N++FGQ+       Q S
Sbjct: 211  FSGTNSPSI-LPSAQNNTPSLSSFSQLGASLNTGFGARPSNPHNTVFGQQVQFSSPVQNS 269

Query: 744  GSFGSNNLTFGTQGLFGSQQHTQQQGNGNASSFNMPFSSGKNNPTSFAGSFQSSDVAVNQ 923
              FG  N    +    G    +Q  GN         FS+        AGS   S  A+  
Sbjct: 270  SGFGMTNFPSTSVVAVGGGVGSQTFGN---------FSTLSGFDIKNAGSNIFSSAALTN 320

Query: 924  SPVLSVGHNPPASL--GGQTYVDRSPEGVPAEMAIWLKEKWNPGEIPEEAPPDSYV 1085
             P  +   +    +    Q      PE    ++ IW+KEKW PGEIPE APPD+ +
Sbjct: 321  LPPTNANSSASGQIAPNAQLVNKLQPENSSVDVDIWMKEKWVPGEIPEMAPPDAVI 376


>ref|NP_001185401.1| zinc finger CCCH domain-containing protein 16 [Arabidopsis thaliana]
            gi|332197583|gb|AEE35704.1| zinc finger CCCH
            domain-containing protein 16 [Arabidopsis thaliana]
          Length = 398

 Score =  213 bits (542), Expect = 9e-53
 Identities = 128/318 (40%), Positives = 174/318 (54%), Gaps = 16/318 (5%)
 Frame = +3

Query: 180  ENTWTRGEPA----GTNVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERPIWKLTCY 347
            +NTW+R        G   + Q +  QT  ++H C DP +CK ++ DDFK ERP+WKLTCY
Sbjct: 92   QNTWSRTASTPTGGGAAASTQQTGKQTQPADHKCTDPAACKRVMQDDFKNERPMWKLTCY 151

Query: 348  AHWRHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYV 527
             HW++ PCD+ GD+SYEELRA AY++AK+G+ L S+VERERN+ NSK+ +FEN  RNPY 
Sbjct: 152  GHWKYFPCDVTGDISYEELRAVAYEEAKRGIPLQSIVERERNLQNSKIAEFENFLRNPY- 210

Query: 528  ISPNTTIGGAIPFPAINNSAFPAPVQKNAP-PSVSSFSQLGI--PTNQGSNTS-----VV 683
                +      PF A   S FP   Q N+P P+ S F+Q      TN G  +S       
Sbjct: 211  --KGSVTANQSPFAATTPSIFPQSSQINSPSPAFSGFNQQTAFSNTNAGGLSSSGPPNAF 268

Query: 684  ASTN---SIFGQKSVPPVSTQPSGSFGSNNLTFGTQGLFGSQQHTQQQGNGNASSFNMPF 854
            AS N   + F   +  PV + PSG F +N  T      FG        G G A++     
Sbjct: 269  ASFNKQPNAFSVNTPQPVPSGPSG-FQTNPSTTFKPASFG-------PGPGFATTPQNNN 320

Query: 855  SSGKNNPTSFAGSFQSSDVAVN-QSPVLSVGHNPPASLGGQTYVDRSPEGVPAEMAIWLK 1031
              G++ PT    + Q++  A N   PV S       +    +  +    G P + +IWLK
Sbjct: 321  IFGQSTPTPATNTSQNNQTAFNFNVPVASFTAPAINTTNTSSGTELQIGGDPVDSSIWLK 380

Query: 1032 EKWNPGEIPEEAPPDSYV 1085
            EKWNPGEIPE+APPD++V
Sbjct: 381  EKWNPGEIPEQAPPDAFV 398