BLASTX nr result

ID: Coptis24_contig00026432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026432
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21002.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264...   115   3e-24
ref|XP_004139421.1| PREDICTED: uncharacterized protein LOC101208...   114   8e-24
dbj|BAJ53247.1| JHL25H03.10 [Jatropha curcas]                         111   7e-23
ref|XP_003609252.1| RNA binding protein [Medicago truncatula] gi...   110   1e-22

>emb|CBI21002.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/110 (50%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
 Frame = -2

Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152
           M+F+ GSKVEV +K  VP G+W   EI+SG+G  Y + +DS LG++  +  D V RK++R
Sbjct: 1   MKFRKGSKVEVLNKKEVPSGAWHCAEIISGNGHNYSVRYDSYLGMTNKANVDRVSRKAIR 60

Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSEE 2
           PCP PV G+  WV GD VEVF   SWK  +VL+V+   YY+VRL+GS  E
Sbjct: 61  PCPLPVKGMESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHE 110


>ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264564 [Vitis vinifera]
          Length = 440

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/110 (50%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
 Frame = -2

Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152
           M+F+ GSKVEV +K  VP G+W   EI+SG+G  Y + +DS LG++  +  D V RK++R
Sbjct: 1   MKFRKGSKVEVLNKKEVPSGAWHCAEIISGNGHNYSVRYDSYLGMTNKANVDRVSRKAIR 60

Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSEE 2
           PCP PV G+  WV GD VEVF   SWK  +VL+V+   YY+VRL+GS  E
Sbjct: 61  PCPLPVKGMESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHE 110


>ref|XP_004139421.1| PREDICTED: uncharacterized protein LOC101208549 [Cucumis sativus]
           gi|449524611|ref|XP_004169315.1| PREDICTED:
           uncharacterized protein LOC101223903 [Cucumis sativus]
          Length = 493

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/110 (52%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
 Frame = -2

Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152
           MRF+ GSKVEV SK  VP GSWR+ EI+SG G YY + +D     S  +V + V RK++R
Sbjct: 1   MRFRKGSKVEVLSKKEVPSGSWRSAEIMSGSGHYYTVRYDKFEDGSNQTVVERVSRKAIR 60

Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSEE 2
           PCPP    L  W+ GD VEVF   SWK+  V  V G+N Y+VRL+GSS E
Sbjct: 61  PCPPSQEILENWIPGDVVEVFNDRSWKMATVSEVLGKNNYVVRLLGSSCE 110


>dbj|BAJ53247.1| JHL25H03.10 [Jatropha curcas]
          Length = 399

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/109 (49%), Positives = 75/109 (68%), Gaps = 1/109 (0%)
 Frame = -2

Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152
           MRFK GSKVEVFSK  V  G+W   EI+SG+G  Y + + S L VS  +V + V RK++R
Sbjct: 1   MRFKKGSKVEVFSKKEVSTGAWLCAEIISGNGHTYSVKYGSFL-VSNEAVVERVPRKAIR 59

Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSE 5
           PCPPP+ G+  WV G+ VE F  ++WK   +++V G NY+ VR++GSS+
Sbjct: 60  PCPPPMQGVYTWVPGNLVEAFHNLAWKTARIVKVMGMNYFFVRILGSSK 108


>ref|XP_003609252.1| RNA binding protein [Medicago truncatula]
           gi|355510307|gb|AES91449.1| RNA binding protein
           [Medicago truncatula]
          Length = 468

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
 Frame = -2

Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152
           MRFK G+KVEV SK  VP GSW   EI+ G G  Y + ++   G     + + V +KS+R
Sbjct: 1   MRFKKGTKVEVLSKAEVPSGSWLCAEIIGGKGHRYTVMYEGFRGAMDEEIVELVSKKSIR 60

Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSEE 2
           PCPPP+  +  W  GD VEV++  SWK+  VL+V G+ Y  VRL+GSS E
Sbjct: 61  PCPPPLELVENWTPGDIVEVYQNFSWKMATVLKVLGKKYISVRLLGSSVE 110


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