BLASTX nr result
ID: Coptis24_contig00026432
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026432 (341 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21002.3| unnamed protein product [Vitis vinifera] 115 3e-24 ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264... 115 3e-24 ref|XP_004139421.1| PREDICTED: uncharacterized protein LOC101208... 114 8e-24 dbj|BAJ53247.1| JHL25H03.10 [Jatropha curcas] 111 7e-23 ref|XP_003609252.1| RNA binding protein [Medicago truncatula] gi... 110 1e-22 >emb|CBI21002.3| unnamed protein product [Vitis vinifera] Length = 386 Score = 115 bits (289), Expect = 3e-24 Identities = 56/110 (50%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Frame = -2 Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152 M+F+ GSKVEV +K VP G+W EI+SG+G Y + +DS LG++ + D V RK++R Sbjct: 1 MKFRKGSKVEVLNKKEVPSGAWHCAEIISGNGHNYSVRYDSYLGMTNKANVDRVSRKAIR 60 Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSEE 2 PCP PV G+ WV GD VEVF SWK +VL+V+ YY+VRL+GS E Sbjct: 61 PCPLPVKGMESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHE 110 >ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264564 [Vitis vinifera] Length = 440 Score = 115 bits (289), Expect = 3e-24 Identities = 56/110 (50%), Positives = 75/110 (68%), Gaps = 1/110 (0%) Frame = -2 Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152 M+F+ GSKVEV +K VP G+W EI+SG+G Y + +DS LG++ + D V RK++R Sbjct: 1 MKFRKGSKVEVLNKKEVPSGAWHCAEIISGNGHNYSVRYDSYLGMTNKANVDRVSRKAIR 60 Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSEE 2 PCP PV G+ WV GD VEVF SWK +VL+V+ YY+VRL+GS E Sbjct: 61 PCPLPVKGMESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHE 110 >ref|XP_004139421.1| PREDICTED: uncharacterized protein LOC101208549 [Cucumis sativus] gi|449524611|ref|XP_004169315.1| PREDICTED: uncharacterized protein LOC101223903 [Cucumis sativus] Length = 493 Score = 114 bits (285), Expect = 8e-24 Identities = 58/110 (52%), Positives = 72/110 (65%), Gaps = 1/110 (0%) Frame = -2 Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152 MRF+ GSKVEV SK VP GSWR+ EI+SG G YY + +D S +V + V RK++R Sbjct: 1 MRFRKGSKVEVLSKKEVPSGSWRSAEIMSGSGHYYTVRYDKFEDGSNQTVVERVSRKAIR 60 Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSEE 2 PCPP L W+ GD VEVF SWK+ V V G+N Y+VRL+GSS E Sbjct: 61 PCPPSQEILENWIPGDVVEVFNDRSWKMATVSEVLGKNNYVVRLLGSSCE 110 >dbj|BAJ53247.1| JHL25H03.10 [Jatropha curcas] Length = 399 Score = 111 bits (277), Expect = 7e-23 Identities = 54/109 (49%), Positives = 75/109 (68%), Gaps = 1/109 (0%) Frame = -2 Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152 MRFK GSKVEVFSK V G+W EI+SG+G Y + + S L VS +V + V RK++R Sbjct: 1 MRFKKGSKVEVFSKKEVSTGAWLCAEIISGNGHTYSVKYGSFL-VSNEAVVERVPRKAIR 59 Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSE 5 PCPPP+ G+ WV G+ VE F ++WK +++V G NY+ VR++GSS+ Sbjct: 60 PCPPPMQGVYTWVPGNLVEAFHNLAWKTARIVKVMGMNYFFVRILGSSK 108 >ref|XP_003609252.1| RNA binding protein [Medicago truncatula] gi|355510307|gb|AES91449.1| RNA binding protein [Medicago truncatula] Length = 468 Score = 110 bits (275), Expect = 1e-22 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 1/110 (0%) Frame = -2 Query: 328 MRFKTGSKVEVFSKG-VPFGSWRTGEIVSGDGRYYDIWFDSALGVSGTSVYDSVLRKSVR 152 MRFK G+KVEV SK VP GSW EI+ G G Y + ++ G + + V +KS+R Sbjct: 1 MRFKKGTKVEVLSKAEVPSGSWLCAEIIGGKGHRYTVMYEGFRGAMDEEIVELVSKKSIR 60 Query: 151 PCPPPVHGLREWVEGDYVEVFEGMSWKVGIVLRVSGRNYYMVRLVGSSEE 2 PCPPP+ + W GD VEV++ SWK+ VL+V G+ Y VRL+GSS E Sbjct: 61 PCPPPLELVENWTPGDIVEVYQNFSWKMATVLKVLGKKYISVRLLGSSVE 110