BLASTX nr result

ID: Coptis24_contig00026426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026426
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279805.1| PREDICTED: mitochondrial inner membrane prot...    80   2e-13
gb|ABK27122.1| unknown [Picea sitchensis]                              77   1e-12
ref|XP_002528106.1| mitochondrial inner membrane protease subuni...    77   2e-12
ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane prot...    69   4e-10
tpg|DAA43369.1| TPA: hypothetical protein ZEAMMB73_935767 [Zea m...    69   4e-10

>ref|XP_002279805.1| PREDICTED: mitochondrial inner membrane protease subunit 2 [Vitis
           vinifera] gi|297740215|emb|CBI30397.3| unnamed protein
           product [Vitis vinifera]
          Length = 170

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = -1

Query: 255 KRIIGLPGDLINMPNAYDTLMIPEGHCWVEGDNSSSSLDSRTFGP 121
           KRII LPGD I  P++YD L IPEGHCWVEGDNS+SSLDSR+FGP
Sbjct: 91  KRIIALPGDWITAPHSYDALRIPEGHCWVEGDNSASSLDSRSFGP 135


>gb|ABK27122.1| unknown [Picea sitchensis]
          Length = 170

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/45 (73%), Positives = 38/45 (84%)
 Frame = -1

Query: 255 KRIIGLPGDLINMPNAYDTLMIPEGHCWVEGDNSSSSLDSRTFGP 121
           KR+I LPGD I++P  YD L IPEGHCWVEGDN+ SSLDSR+FGP
Sbjct: 91  KRLIALPGDWISVPGTYDILKIPEGHCWVEGDNAVSSLDSRSFGP 135


>ref|XP_002528106.1| mitochondrial inner membrane protease subunit, putative [Ricinus
           communis] gi|223532495|gb|EEF34285.1| mitochondrial
           inner membrane protease subunit, putative [Ricinus
           communis]
          Length = 170

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/45 (73%), Positives = 37/45 (82%)
 Frame = -1

Query: 255 KRIIGLPGDLINMPNAYDTLMIPEGHCWVEGDNSSSSLDSRTFGP 121
           KRIIGLPGD I  P+AYD + +PEGHCWVEGDN  SS+DSR FGP
Sbjct: 91  KRIIGLPGDWIGTPHAYDVVKVPEGHCWVEGDNLLSSMDSRYFGP 135


>ref|XP_004137724.1| PREDICTED: mitochondrial inner membrane protease subunit 2-like
           [Cucumis sativus] gi|449483475|ref|XP_004156603.1|
           PREDICTED: mitochondrial inner membrane protease subunit
           2-like [Cucumis sativus]
          Length = 184

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = -1

Query: 255 KRIIGLPGDLINMPNAYDTLMIPEGHCWVEGDNSSSSLDSRTFGP 121
           KRII LPGD +     YD + +PEGHCWVEGDN   S+DSR+FGP
Sbjct: 91  KRIIALPGDWVGTRQTYDVVKVPEGHCWVEGDNPECSMDSRSFGP 135


>tpg|DAA43369.1| TPA: hypothetical protein ZEAMMB73_935767 [Zea mays]
          Length = 99

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/45 (64%), Positives = 35/45 (77%)
 Frame = -1

Query: 255 KRIIGLPGDLINMPNAYDTLMIPEGHCWVEGDNSSSSLDSRTFGP 121
           KR+IGLPG+ I +P + +   IPEGHCWVEGDNS+ S DSR FGP
Sbjct: 49  KRLIGLPGEKIQLPGSLNPTKIPEGHCWVEGDNSTRSWDSRAFGP 93


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