BLASTX nr result

ID: Coptis24_contig00026420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026420
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609865.1| ABC transporter G family member [Medicago tr...   100   7e-24
emb|CBI37027.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance prote...   103   2e-20
emb|CBI26001.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_003550575.1| PREDICTED: pleiotropic drug resistance prote...   102   5e-20

>ref|XP_003609865.1| ABC transporter G family member [Medicago truncatula]
            gi|355510920|gb|AES92062.1| ABC transporter G family
            member [Medicago truncatula]
          Length = 1470

 Score =  100 bits (250), Expect(2) = 7e-24
 Identities = 45/69 (65%), Positives = 52/69 (75%)
 Frame = -2

Query: 497  TLLYFNYLGMMLASLTTATFQVASVLGSFCYTMLNLFSRFLIPGTGIPKWWVWCYWICPT 318
            T LYF YLGM++ SL+     +ASVL +  YT+ NLFS FL+PG  IPKWWVWCYWICPT
Sbjct: 1339 TFLYFVYLGMLIMSLSL-NLDLASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPT 1397

Query: 317  AWSLKGLFT 291
            AWSL GL T
Sbjct: 1398 AWSLNGLLT 1406



 Score = 35.0 bits (79), Expect(2) = 7e-24
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = -3

Query: 295  LRGQHGDVNTEILVYGEQKEVSFF*QDYFSY 203
            L  Q+GD++ EIL++G++K V  F +DY+ +
Sbjct: 1405 LTSQYGDMDKEILIFGDKKPVGTFLKDYYGF 1435


>emb|CBI37027.3| unnamed protein product [Vitis vinifera]
          Length = 182

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/69 (73%), Positives = 53/69 (76%)
 Frame = -2

Query: 497 TLLYFNYLGMMLASLTTATFQVASVLGSFCYTMLNLFSRFLIPGTGIPKWWVWCYWICPT 318
           TLLYFNYLGMM  SLT  TFQVAS L  F YTMLNLF+ F+I    IPKWWVW YWICPT
Sbjct: 51  TLLYFNYLGMMFISLTP-TFQVASALAGFSYTMLNLFAGFIISEPKIPKWWVWGYWICPT 109

Query: 317 AWSLKGLFT 291
           AWSLK L T
Sbjct: 110 AWSLKALIT 118


>ref|XP_002266393.2| PREDICTED: pleiotropic drug resistance protein 3-like [Vitis
            vinifera]
          Length = 1492

 Score =  103 bits (258), Expect = 2e-20
 Identities = 45/69 (65%), Positives = 55/69 (79%)
 Frame = -2

Query: 497  TLLYFNYLGMMLASLTTATFQVASVLGSFCYTMLNLFSRFLIPGTGIPKWWVWCYWICPT 318
            T LYF YLGM++ SL+  + QVAS+L +  YT+LNLFS FL+PG  IPKWW+WCYWICPT
Sbjct: 1361 TFLYFVYLGMLIVSLSPNS-QVASILATAAYTILNLFSGFLMPGPKIPKWWIWCYWICPT 1419

Query: 317  AWSLKGLFT 291
            +WSL GL T
Sbjct: 1420 SWSLNGLLT 1428


>emb|CBI26001.3| unnamed protein product [Vitis vinifera]
          Length = 1486

 Score =  103 bits (258), Expect = 2e-20
 Identities = 45/69 (65%), Positives = 55/69 (79%)
 Frame = -2

Query: 497  TLLYFNYLGMMLASLTTATFQVASVLGSFCYTMLNLFSRFLIPGTGIPKWWVWCYWICPT 318
            T LYF YLGM++ SL+  + QVAS+L +  YT+LNLFS FL+PG  IPKWW+WCYWICPT
Sbjct: 1355 TFLYFVYLGMLIVSLSPNS-QVASILATAAYTILNLFSGFLMPGPKIPKWWIWCYWICPT 1413

Query: 317  AWSLKGLFT 291
            +WSL GL T
Sbjct: 1414 SWSLNGLLT 1422


>ref|XP_003550575.1| PREDICTED: pleiotropic drug resistance protein 3-like [Glycine max]
          Length = 1435

 Score =  102 bits (254), Expect = 5e-20
 Identities = 45/69 (65%), Positives = 53/69 (76%)
 Frame = -2

Query: 497  TLLYFNYLGMMLASLTTATFQVASVLGSFCYTMLNLFSRFLIPGTGIPKWWVWCYWICPT 318
            T LYF YLGMM+ S+++    +ASVL +  YT+ NLFS FL+PG  IPKWWVWCYWICPT
Sbjct: 1304 TFLYFVYLGMMVMSMSS-NLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPT 1362

Query: 317  AWSLKGLFT 291
            AWSL GL T
Sbjct: 1363 AWSLNGLLT 1371


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