BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026412
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic su...   256   3e-66
ref|XP_002515746.1| DNA polymerase delta catalytic subunit, puta...   249   4e-64
ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|2...   243   2e-62
ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   237   2e-60
ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic su...   237   2e-60

>ref|XP_002264385.1| PREDICTED: DNA polymerase delta catalytic subunit [Vitis vinifera]
           gi|296088521|emb|CBI37512.3| unnamed protein product
           [Vitis vinifera]
          Length = 1089

 Score =  256 bits (653), Expect = 3e-66
 Identities = 125/167 (74%), Positives = 143/167 (85%)
 Frame = -3

Query: 502 ILQDGEDRKRALSSRLAIWKRPNLSSSYISHSNCIIFQQLEIDYVIGERNRELLAYSSGH 323
           IL+D EDR RAL+SRL+ W RP LSS+Y+S S  I+FQQLEIDYVIGE ++EL+  SSG 
Sbjct: 54  ILRDIEDR-RALASRLSKWARPPLSSAYLSSSQSIVFQQLEIDYVIGESHKELMPNSSGS 112

Query: 322 AAILRIFGVTREGHSVCCNVHGFEPYFYVSCPQGMGPDDVSRFRHILESKMKEANRNSTV 143
           AAI+RIFGVTREGHSVCCNVHGFEPYFY+SCP GMGPDD+SRF  +LE +M+E NRNS V
Sbjct: 113 AAIIRIFGVTREGHSVCCNVHGFEPYFYISCPPGMGPDDISRFHQVLEGRMREVNRNSRV 172

Query: 142 PQFVLRIEMVQKKSIMYYQQQQSHLFLKIVVALPTMVAGCRGILERG 2
           P+FV RIEMVQK+SIMYYQ Q SH FLKIVVALPTMV  CRGIL+RG
Sbjct: 173 PKFVRRIEMVQKRSIMYYQLQSSHPFLKIVVALPTMVTSCRGILDRG 219


>ref|XP_002515746.1| DNA polymerase delta catalytic subunit, putative [Ricinus communis]
           gi|223545183|gb|EEF46693.1| DNA polymerase delta
           catalytic subunit, putative [Ricinus communis]
          Length = 1049

 Score =  249 bits (635), Expect = 4e-64
 Identities = 128/212 (60%), Positives = 152/212 (71%)
 Frame = -3

Query: 637 PTPTPQPPKRFQQRTPVARXXXXXXXXXDVFXXXXXXXXXXXEIFILQDGEDRKRALSSR 458
           P  TPQPP   + +              +             E  IL+D E +  AL+SR
Sbjct: 12  PAATPQPPPAAKHKATTPSTTVDEEFVDEDVFLDETLIAEDEENLILRDLE-KHEALASR 70

Query: 457 LAIWKRPNLSSSYISHSNCIIFQQLEIDYVIGERNRELLAYSSGHAAILRIFGVTREGHS 278
           L+ W RP LS +Y+S S  IIFQQLEIDYVIGE NRELL   SG AAI+RIFGVTREGHS
Sbjct: 71  LSRWARPPLSHAYLSQSQSIIFQQLEIDYVIGESNRELLPDRSGPAAIIRIFGVTREGHS 130

Query: 277 VCCNVHGFEPYFYVSCPQGMGPDDVSRFRHILESKMKEANRNSTVPQFVLRIEMVQKKSI 98
           VCCNVHGFEPYFY+SCP GMGPDD+S F+ ILE +M+E NR+S VP+F+ RIE+VQK+SI
Sbjct: 131 VCCNVHGFEPYFYISCPSGMGPDDISSFQQILEGRMREVNRSSKVPKFIRRIEVVQKRSI 190

Query: 97  MYYQQQQSHLFLKIVVALPTMVAGCRGILERG 2
           MYYQQQ+SH FLKIVVALPT+VA CRGIL++G
Sbjct: 191 MYYQQQESHPFLKIVVALPTVVASCRGILDKG 222


>ref|XP_002307042.1| predicted protein [Populus trichocarpa] gi|222856491|gb|EEE94038.1|
           predicted protein [Populus trichocarpa]
          Length = 1081

 Score =  243 bits (620), Expect = 2e-62
 Identities = 128/215 (59%), Positives = 149/215 (69%), Gaps = 3/215 (1%)
 Frame = -3

Query: 637 PTPTPQPPKRFQQRTPVARXXXXXXXXXDVFXXXXXXXXXXXEIFILQDGED---RKRAL 467
           P PTPQPP      +P  +         + F              I +D E+    ++ L
Sbjct: 4   PPPTPQPPNP----SPAVKHQAITPTVDEEFLDEDVFLDET---LIAEDEENLNKERQVL 56

Query: 466 SSRLAIWKRPNLSSSYISHSNCIIFQQLEIDYVIGERNRELLAYSSGHAAILRIFGVTRE 287
           +SRL+ W RP LS  Y+S S  IIFQQLEIDYVIGE ++ELL   SG AAILRIFGVT E
Sbjct: 57  TSRLSKWARPKLSDGYVSQSQSIIFQQLEIDYVIGETHKELLPDRSGSAAILRIFGVTGE 116

Query: 286 GHSVCCNVHGFEPYFYVSCPQGMGPDDVSRFRHILESKMKEANRNSTVPQFVLRIEMVQK 107
           GHSVCC VHGFEPYFYVSCP GM PDD+S F  ILE KM+E NRN+ VP+FV RIE+V K
Sbjct: 117 GHSVCCLVHGFEPYFYVSCPPGMNPDDISHFHKILEGKMREVNRNTKVPKFVRRIELVHK 176

Query: 106 KSIMYYQQQQSHLFLKIVVALPTMVAGCRGILERG 2
           +SIMYYQQQQSH FLKIVVALPTMV+GCRGIL++G
Sbjct: 177 RSIMYYQQQQSHPFLKIVVALPTMVSGCRGILDKG 211


>ref|XP_004159268.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase delta catalytic
           subunit-like [Cucumis sativus]
          Length = 573

 Score =  237 bits (604), Expect = 2e-60
 Identities = 116/167 (69%), Positives = 136/167 (81%)
 Frame = -3

Query: 502 ILQDGEDRKRALSSRLAIWKRPNLSSSYISHSNCIIFQQLEIDYVIGERNRELLAYSSGH 323
           IL+D E+R+ AL+SR++ W RP LS  Y+S S  I+FQQLEIDYVIGE ++ELL   SG 
Sbjct: 51  ILRDIEERQ-ALASRISKWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGP 109

Query: 322 AAILRIFGVTREGHSVCCNVHGFEPYFYVSCPQGMGPDDVSRFRHILESKMKEANRNSTV 143
           AAILRIFGVTREGHSVCC+VHGFEPYFY+SCP GMGPDD+S F   LE++MKE NRN+  
Sbjct: 110 AAILRIFGVTREGHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNKA 169

Query: 142 PQFVLRIEMVQKKSIMYYQQQQSHLFLKIVVALPTMVAGCRGILERG 2
           P FV RIE+VQ++SIMYYQQQ    FLKIVVALPTMV  CRGIL+RG
Sbjct: 170 PNFVRRIELVQRRSIMYYQQQTFQSFLKIVVALPTMVTSCRGILDRG 216


>ref|XP_004143345.1| PREDICTED: DNA polymerase delta catalytic subunit-like [Cucumis
           sativus]
          Length = 1086

 Score =  237 bits (604), Expect = 2e-60
 Identities = 116/167 (69%), Positives = 136/167 (81%)
 Frame = -3

Query: 502 ILQDGEDRKRALSSRLAIWKRPNLSSSYISHSNCIIFQQLEIDYVIGERNRELLAYSSGH 323
           IL+D E+R+ AL+SR++ W RP LS  Y+S S  I+FQQLEIDYVIGE ++ELL   SG 
Sbjct: 51  ILRDIEERQ-ALASRISKWARPPLSQDYLSQSKSIVFQQLEIDYVIGESHKELLPNLSGP 109

Query: 322 AAILRIFGVTREGHSVCCNVHGFEPYFYVSCPQGMGPDDVSRFRHILESKMKEANRNSTV 143
           AAILRIFGVTREGHSVCC+VHGFEPYFY+SCP GMGPDD+S F   LE++MKE NRN+  
Sbjct: 110 AAILRIFGVTREGHSVCCHVHGFEPYFYISCPSGMGPDDISLFHRTLEARMKEVNRNNKA 169

Query: 142 PQFVLRIEMVQKKSIMYYQQQQSHLFLKIVVALPTMVAGCRGILERG 2
           P FV RIE+VQ++SIMYYQQQ    FLKIVVALPTMV  CRGIL+RG
Sbjct: 170 PNFVRRIELVQRRSIMYYQQQTFQSFLKIVVALPTMVTSCRGILDRG 216