BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026410
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...    56   3e-06
ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymera...    55   6e-06

>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
           communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
           mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/38 (76%), Positives = 31/38 (81%), Gaps = 2/38 (5%)
 Frame = +1

Query: 100 PPFPEGYVPP-TSEAEKGSENQQGTETQ-LPLDPIIDQ 207
           PPFPEGYVPP T EAEKGSE +Q  ETQ  P+DPIIDQ
Sbjct: 206 PPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQ 243


>ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 6-like [Glycine max]
          Length = 252

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 2/38 (5%)
 Frame = +1

Query: 100 PPFPEGYVPP-TSEAEKGSENQQGTETQLP-LDPIIDQ 207
           PPFPEGYVPP T+E EKG+E Q+  ETQ P  DPIIDQ
Sbjct: 207 PPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQ 244