BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026409
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37137.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...   203   1e-50
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   202   3e-50
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu...   171   4e-41
ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cu...   166   1e-39

>emb|CBI37137.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  203 bits (516), Expect = 1e-50
 Identities = 104/155 (67%), Positives = 120/155 (77%), Gaps = 1/155 (0%)
 Frame = -1

Query: 494 KDTKKRQKTVSYDEDVDFDAVLDAASAGFVETERDELVRKGILTPFHKLKGFERRLQQPG 315
           KD KKR+KT+S+D+DVDFDAVLDAASAGFVETERD+LVRKGILTPFHKLKGFERRLQQPG
Sbjct: 188 KDLKKRKKTISFDDDVDFDAVLDAASAGFVETERDKLVRKGILTPFHKLKGFERRLQQPG 247

Query: 314 PSRR-TVPEEEDKTDDIASATVARAVRSMSDAAQARPTTKLLDAQDLPKLDAPTHPFRRX 138
           PS R  +PEE DK DD+ASA++ARAV+S+S++AQARPTTKLLD++ LPKLDAP+HPF R 
Sbjct: 248 PSSRDNLPEEGDKIDDLASASIARAVQSISESAQARPTTKLLDSETLPKLDAPSHPFHRL 307

Query: 137 XXXXXXXXXPXXXXXXXXXXXXXXXRPLPDKKWRK 33
                                    RPLP KKWRK
Sbjct: 308 KKPLKYPLPLDSEVEKNKDKKRKKKRPLPSKKWRK 342


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score =  203 bits (516), Expect = 1e-50
 Identities = 104/155 (67%), Positives = 120/155 (77%), Gaps = 1/155 (0%)
 Frame = -1

Query: 494 KDTKKRQKTVSYDEDVDFDAVLDAASAGFVETERDELVRKGILTPFHKLKGFERRLQQPG 315
           KD KKR+KT+S+D+DVDFDAVLDAASAGFVETERD+LVRKGILTPFHKLKGFERRLQQPG
Sbjct: 188 KDLKKRKKTISFDDDVDFDAVLDAASAGFVETERDKLVRKGILTPFHKLKGFERRLQQPG 247

Query: 314 PSRR-TVPEEEDKTDDIASATVARAVRSMSDAAQARPTTKLLDAQDLPKLDAPTHPFRRX 138
           PS R  +PEE DK DD+ASA++ARAV+S+S++AQARPTTKLLD++ LPKLDAP+HPF R 
Sbjct: 248 PSSRDNLPEEGDKIDDLASASIARAVQSISESAQARPTTKLLDSETLPKLDAPSHPFHRL 307

Query: 137 XXXXXXXXXPXXXXXXXXXXXXXXXRPLPDKKWRK 33
                                    RPLP KKWRK
Sbjct: 308 KKPLKYPLPLDSEVEKNKDKKRKKKRPLPSKKWRK 342


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  202 bits (513), Expect = 3e-50
 Identities = 103/155 (66%), Positives = 120/155 (77%), Gaps = 1/155 (0%)
 Frame = -1

Query: 494 KDTKKRQKTVSYDEDVDFDAVLDAASAGFVETERDELVRKGILTPFHKLKGFERRLQQPG 315
           KD KKR+KT+S+D+DVDFDAVLDAASAGFVETERD+LVRKGILTPFHKLKGFERRLQQPG
Sbjct: 210 KDLKKRKKTISFDDDVDFDAVLDAASAGFVETERDKLVRKGILTPFHKLKGFERRLQQPG 269

Query: 314 PSRR-TVPEEEDKTDDIASATVARAVRSMSDAAQARPTTKLLDAQDLPKLDAPTHPFRRX 138
           PS R  +PEE DK DD+ASA++ARAV+S+S++AQARPTTK+LD++ LPKLDAP+HPF R 
Sbjct: 270 PSSRGNLPEEGDKIDDLASASIARAVQSISESAQARPTTKMLDSETLPKLDAPSHPFHRL 329

Query: 137 XXXXXXXXXPXXXXXXXXXXXXXXXRPLPDKKWRK 33
                                    RPLP KKWRK
Sbjct: 330 KKPLKYPLPLDSEVEKNKDKKRKKKRPLPGKKWRK 364


>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857105|gb|EEE94652.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1206

 Score =  171 bits (434), Expect = 4e-41
 Identities = 93/157 (59%), Positives = 110/157 (70%), Gaps = 1/157 (0%)
 Frame = -1

Query: 494 KDTKKRQKTVSYDEDVDFDAVLDAASAGFVETERDELVRKGILTPFHKLKGFERRLQQPG 315
           K+ +K+QKTVS+ +D DFD +LD AS+GFVETERDELVRKGILTPFH+LKGFERRLQQPG
Sbjct: 184 KNKEKQQKTVSFADDADFDLMLDGASSGFVETERDELVRKGILTPFHQLKGFERRLQQPG 243

Query: 314 PSR-RTVPEEEDKTDDIASATVARAVRSMSDAAQARPTTKLLDAQDLPKLDAPTHPFRRX 138
            S  +    EEDKTD + S +V RA  SM +AA+ARPTTKLLD++ LPKLDAPT PF+R 
Sbjct: 244 SSSGKNESIEEDKTDGLDSDSVVRAAHSMLEAAKARPTTKLLDSEALPKLDAPTRPFQRL 303

Query: 137 XXXXXXXXXPXXXXXXXXXXXXXXXRPLPDKKWRKAA 27
                    P               RPLP KKWRK+A
Sbjct: 304 KTPLKACQSPERDAEKRKGSERKRKRPLPGKKWRKSA 340


>ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
           gi|449522123|ref|XP_004168077.1| PREDICTED: DNA repair
           protein rhp26-like [Cucumis sativus]
          Length = 1221

 Score =  166 bits (421), Expect = 1e-39
 Identities = 97/161 (60%), Positives = 105/161 (65%), Gaps = 8/161 (4%)
 Frame = -1

Query: 491 DTKKRQKTVSYDEDVDFDAVLDAASAGFVETERDELVRKGILTPFHKLKGFERRLQQPGP 312
           D  KR K VS+DED DFDA LDAA+ GFVETERDELVRKGILTPFHKLKGFERRLQ PG 
Sbjct: 177 DGGKRLKVVSFDEDNDFDAALDAATVGFVETERDELVRKGILTPFHKLKGFERRLQSPGQ 236

Query: 311 --------SRRTVPEEEDKTDDIASATVARAVRSMSDAAQARPTTKLLDAQDLPKLDAPT 156
                   SR  V EEE++ DD AS +VARA+RSMS AAQARPTTKLLD   LPKLD PT
Sbjct: 237 SSLQNPRGSRDEVKEEEEENDDFASDSVARALRSMSVAAQARPTTKLLDPDALPKLDPPT 296

Query: 155 HPFRRXXXXXXXXXXPXXXXXXXXXXXXXXXRPLPDKKWRK 33
            PF R                          RPLPDKK+R+
Sbjct: 297 RPFYR-LKTPAKVPLSAEDKPTTKTKSKQTRRPLPDKKYRR 336