BLASTX nr result

ID: Coptis24_contig00026407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026407
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27927.3| unnamed protein product [Vitis vinifera]              295   5e-78
ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262...   295   5e-78
ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|2...   279   4e-73
ref|XP_002514143.1| conserved hypothetical protein [Ricinus comm...   268   6e-70
ref|XP_002867402.1| hypothetical protein ARALYDRAFT_491802 [Arab...   259   3e-67

>emb|CBI27927.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  295 bits (756), Expect = 5e-78
 Identities = 146/235 (62%), Positives = 185/235 (78%)
 Frame = -2

Query: 712 ATCLKTEVVSFESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILL 533
           A  LK ++++FES+SKT GLA +I  LC   G    G  F +LGLIEPW+ADDE AS+L+
Sbjct: 228 AAGLKAQILTFESSSKTGGLAVQIHELCLQRG----GDSFAILGLIEPWKADDEAASVLI 283

Query: 532 SHLTSGEGEDILWQCQVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLFPL 353
           SHL+ G  E++ W  QV+C++ILPK+LVL  PASRVL++ATIE+CKLHQ+A+V  LLFPL
Sbjct: 284 SHLSDGSEEELGWPSQVVCSIILPKLLVLEEPASRVLVTATIEYCKLHQRAAVYGLLFPL 343

Query: 352 LLCKDGINNPICEVVTRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDELV 173
           LL + GINNPIC+VV RII+ECLHP HVS+F QKL+ +E   R  + +P HQ+L+++ELV
Sbjct: 344 LLRRGGINNPICDVVVRIIKECLHPAHVSAFFQKLLCEEEHVRSFICLPCHQYLISNELV 403

Query: 172 WTESLFTLFQNILNHNVYLTQDTVDRLVSVVQQLDYEYSKSLKFGNFLLSLVTKC 8
           WTESLF L QNILNHNV+LTQD++D LV  VQ+L   +SKSLKFGNFLL LVTKC
Sbjct: 404 WTESLFNLLQNILNHNVHLTQDSIDHLVYRVQELAEAFSKSLKFGNFLLCLVTKC 458


>ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262802 [Vitis vinifera]
          Length = 491

 Score =  295 bits (756), Expect = 5e-78
 Identities = 146/235 (62%), Positives = 185/235 (78%)
 Frame = -2

Query: 712 ATCLKTEVVSFESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILL 533
           A  LK ++++FES+SKT GLA +I  LC   G    G  F +LGLIEPW+ADDE AS+L+
Sbjct: 228 AAGLKAQILTFESSSKTGGLAVQIHELCLQRG----GDSFAILGLIEPWKADDEAASVLI 283

Query: 532 SHLTSGEGEDILWQCQVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLFPL 353
           SHL+ G  E++ W  QV+C++ILPK+LVL  PASRVL++ATIE+CKLHQ+A+V  LLFPL
Sbjct: 284 SHLSDGSEEELGWPSQVVCSIILPKLLVLEEPASRVLVTATIEYCKLHQRAAVYGLLFPL 343

Query: 352 LLCKDGINNPICEVVTRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDELV 173
           LL + GINNPIC+VV RII+ECLHP HVS+F QKL+ +E   R  + +P HQ+L+++ELV
Sbjct: 344 LLRRGGINNPICDVVVRIIKECLHPAHVSAFFQKLLCEEEHVRSFICLPCHQYLISNELV 403

Query: 172 WTESLFTLFQNILNHNVYLTQDTVDRLVSVVQQLDYEYSKSLKFGNFLLSLVTKC 8
           WTESLF L QNILNHNV+LTQD++D LV  VQ+L   +SKSLKFGNFLL LVTKC
Sbjct: 404 WTESLFNLLQNILNHNVHLTQDSIDHLVYRVQELAEAFSKSLKFGNFLLCLVTKC 458


>ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|222854273|gb|EEE91820.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  279 bits (714), Expect = 4e-73
 Identities = 136/237 (57%), Positives = 186/237 (78%), Gaps = 2/237 (0%)
 Frame = -2

Query: 712 ATCLKTEVVSFESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILL 533
           AT LK  +++FES+SKT+ LA+EIRRL F         PFV+LGL+EPW+ADDETASIL+
Sbjct: 223 ATSLKERIMTFESSSKTVELANEIRRLSFEREAD----PFVILGLLEPWKADDETASILV 278

Query: 532 SHLTSG--EGEDILWQCQVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLF 359
            HL++G  E E+I W  +VLC+++LPKMLVL  PASRVL+ + +E+CKLHQ+A+  ALL 
Sbjct: 279 FHLSNGREEEEEIAWPSKVLCSIMLPKMLVLEEPASRVLVISMVEYCKLHQRAAECALLL 338

Query: 358 PLLLCKDGINNPICEVVTRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDE 179
           PL++ + GINN +C+V+TRI++E LHP HVS+FC+KL+  +   +R + +P HQ L++ +
Sbjct: 339 PLIMKRSGINNHMCDVITRIVKESLHPAHVSAFCRKLLCGQEVEKRSIILPCHQCLVSSQ 398

Query: 178 LVWTESLFTLFQNILNHNVYLTQDTVDRLVSVVQQLDYEYSKSLKFGNFLLSLVTKC 8
           LVWTESLF LFQNILNHNV LTQD+VD+LV ++++L   +SKSLKFGNFLL  +T+C
Sbjct: 399 LVWTESLFNLFQNILNHNVQLTQDSVDQLVLLIRELAPSFSKSLKFGNFLLCFITRC 455


>ref|XP_002514143.1| conserved hypothetical protein [Ricinus communis]
           gi|223546599|gb|EEF48097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score =  268 bits (686), Expect = 6e-70
 Identities = 136/236 (57%), Positives = 177/236 (75%), Gaps = 1/236 (0%)
 Frame = -2

Query: 712 ATCLKTEVVSFESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILL 533
           A  L+ +VV FES S+T+ LA+ IR+LC   G       F VLGL+EPW+ADDE AS+LL
Sbjct: 229 AASLRIQVVIFESCSRTVELANVIRKLCLDKGVNS----FAVLGLVEPWKADDEIASVLL 284

Query: 532 SHLTSG-EGEDILWQCQVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLFP 356
            HL +G + +++ W  QVL +VILPKML+L  PASR+L++ATI++CKLHQ A+  ALLFP
Sbjct: 285 PHLLNGIDHKELDWPSQVLSSVILPKMLILEEPASRMLVAATIDYCKLHQAAAEYALLFP 344

Query: 355 LLLCKDGINNPICEVVTRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDEL 176
           L++   GINN +C+V+TRII+ECLHP HVSSFCQKL+     ++R + +P HQ L+++EL
Sbjct: 345 LIMRTGGINNSLCDVMTRIIKECLHPVHVSSFCQKLLCGGASKKRFICLPCHQCLISNEL 404

Query: 175 VWTESLFTLFQNILNHNVYLTQDTVDRLVSVVQQLDYEYSKSLKFGNFLLSLVTKC 8
           VWTESLF LF NILN N+ LTQD VD+L   VQ+L   +SKSLKFGNFLL  +TKC
Sbjct: 405 VWTESLFNLFHNILNLNIQLTQDLVDQLALRVQELAQMFSKSLKFGNFLLCFITKC 460


>ref|XP_002867402.1| hypothetical protein ARALYDRAFT_491802 [Arabidopsis lyrata subsp.
           lyrata] gi|297313238|gb|EFH43661.1| hypothetical protein
           ARALYDRAFT_491802 [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score =  259 bits (663), Expect = 3e-67
 Identities = 133/235 (56%), Positives = 174/235 (74%), Gaps = 1/235 (0%)
 Frame = -2

Query: 712 ATCLKTEVVSFESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILL 533
           A  L+ +V + ESTS+ + L +EIR+LC   G+      F VL LIEPW ADDETA++LL
Sbjct: 229 AVNLRAQVTNSESTSEVLTLCNEIRKLCLEKGRDS----FRVLALIEPWNADDETAAVLL 284

Query: 532 SHLTSGEGEDIL-WQCQVLCAVILPKMLVLSGPASRVLMSATIEFCKLHQKASVDALLFP 356
           S+L SG  ED L W  QVLC+++LPK + L   ASRVLMS+TIEFCK+HQ+A+  AL+FP
Sbjct: 285 SNLQSGSEEDELGWPSQVLCSIVLPKFVSLEKSASRVLMSSTIEFCKIHQRAAEYALVFP 344

Query: 355 LLLCKDGINNPICEVVTRIIRECLHPPHVSSFCQKLVSKEHERRRLVYIPRHQWLMTDEL 176
           L+L ++GINN ICEV++R+++ECLH   +S FCQKL+    E RR +++P H+ L++DEL
Sbjct: 345 LILRREGINNFICEVISRVLKECLHLGQISGFCQKLLCGRTEERRFMFLPCHRELISDEL 404

Query: 175 VWTESLFTLFQNILNHNVYLTQDTVDRLVSVVQQLDYEYSKSLKFGNFLLSLVTK 11
           +W ESLF LFQNIL H+V L+QD+VD LVS VQ+L   YSKSLKFGNFLL    K
Sbjct: 405 IWNESLFILFQNILIHDVPLSQDSVDCLVSKVQELAERYSKSLKFGNFLLHFTAK 459


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