BLASTX nr result
ID: Coptis24_contig00026400
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026400 (669 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2... 58 2e-06 ref|XP_003615992.1| F-box/kelch-repeat protein [Medicago truncat... 57 3e-06 emb|CBI39466.3| unnamed protein product [Vitis vinifera] 56 6e-06 ref|XP_003637128.1| F-box family protein [Medicago truncatula] g... 55 9e-06 >ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1| predicted protein [Populus trichocarpa] Length = 477 Score = 57.8 bits (138), Expect = 2e-06 Identities = 25/61 (40%), Positives = 37/61 (60%) Frame = -1 Query: 324 DLDAYVKEGGKKRCQALFQFPLDIFLDIISRLPIKPLAVCRCVCKTWRTIVHHPRFVKMH 145 D+DA K GG +++ P+ +DI+SRLP K + C CVCK W+ ++ P F K+H Sbjct: 17 DIDAQTKGGGDD-FRSISALPIQNLVDILSRLPFKTIFSCMCVCKKWKDLILAPDFAKLH 75 Query: 144 H 142 H Sbjct: 76 H 76 >ref|XP_003615992.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355517327|gb|AES98950.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 153 Score = 57.0 bits (136), Expect = 3e-06 Identities = 26/84 (30%), Positives = 45/84 (53%) Frame = -1 Query: 387 SFVIEGDNVEKKSSFAFEVVEDLDAYVKEGGKKRCQALFQFPLDIFLDIISRLPIKPLAV 208 S +I +KK+ E V++++ ++ + P I DI+ RLPIK + + Sbjct: 48 SGLIPSPRAKKKAKTGKEKVDEVEI------QELSPSFADLPFPIATDILLRLPIKSVII 101 Query: 207 CRCVCKTWRTIVHHPRFVKMHHHK 136 C+CVC+TW T++ P F K+H + Sbjct: 102 CKCVCRTWNTVISDPHFAKVHFER 125 >emb|CBI39466.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 56.2 bits (134), Expect = 6e-06 Identities = 23/42 (54%), Positives = 29/42 (69%) Frame = -1 Query: 270 QFPLDIFLDIISRLPIKPLAVCRCVCKTWRTIVHHPRFVKMH 145 + PL I +I+ RLP+K L RCVCK WRT++ HP FVK H Sbjct: 3 ELPLHIIENILLRLPVKSLIRSRCVCKAWRTLISHPHFVKSH 44 >ref|XP_003637128.1| F-box family protein [Medicago truncatula] gi|355503063|gb|AES84266.1| F-box family protein [Medicago truncatula] Length = 230 Score = 55.5 bits (132), Expect = 9e-06 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = -1 Query: 264 PLDIFLDIISRLPIKPLAVCRCVCKTWRTIVHHPRFVKMHHHK 136 P I D++ RLPIK + VC+CVC+TW T++ P F K+H + Sbjct: 93 PFPIATDVLLRLPIKSVLVCKCVCRTWNTVISDPHFAKVHFER 135