BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026400
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06
ref|XP_003615992.1| F-box/kelch-repeat protein [Medicago truncat...    57   3e-06
emb|CBI39466.3| unnamed protein product [Vitis vinifera]               56   6e-06
ref|XP_003637128.1| F-box family protein [Medicago truncatula] g...    55   9e-06

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/61 (40%), Positives = 37/61 (60%)
 Frame = -1

Query: 324 DLDAYVKEGGKKRCQALFQFPLDIFLDIISRLPIKPLAVCRCVCKTWRTIVHHPRFVKMH 145
           D+DA  K GG    +++   P+   +DI+SRLP K +  C CVCK W+ ++  P F K+H
Sbjct: 17  DIDAQTKGGGDD-FRSISALPIQNLVDILSRLPFKTIFSCMCVCKKWKDLILAPDFAKLH 75

Query: 144 H 142
           H
Sbjct: 76  H 76


>ref|XP_003615992.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355517327|gb|AES98950.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 153

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/84 (30%), Positives = 45/84 (53%)
 Frame = -1

Query: 387 SFVIEGDNVEKKSSFAFEVVEDLDAYVKEGGKKRCQALFQFPLDIFLDIISRLPIKPLAV 208
           S +I     +KK+    E V++++       ++   +    P  I  DI+ RLPIK + +
Sbjct: 48  SGLIPSPRAKKKAKTGKEKVDEVEI------QELSPSFADLPFPIATDILLRLPIKSVII 101

Query: 207 CRCVCKTWRTIVHHPRFVKMHHHK 136
           C+CVC+TW T++  P F K+H  +
Sbjct: 102 CKCVCRTWNTVISDPHFAKVHFER 125


>emb|CBI39466.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 23/42 (54%), Positives = 29/42 (69%)
 Frame = -1

Query: 270 QFPLDIFLDIISRLPIKPLAVCRCVCKTWRTIVHHPRFVKMH 145
           + PL I  +I+ RLP+K L   RCVCK WRT++ HP FVK H
Sbjct: 3   ELPLHIIENILLRLPVKSLIRSRCVCKAWRTLISHPHFVKSH 44


>ref|XP_003637128.1| F-box family protein [Medicago truncatula]
           gi|355503063|gb|AES84266.1| F-box family protein
           [Medicago truncatula]
          Length = 230

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 20/43 (46%), Positives = 29/43 (67%)
 Frame = -1

Query: 264 PLDIFLDIISRLPIKPLAVCRCVCKTWRTIVHHPRFVKMHHHK 136
           P  I  D++ RLPIK + VC+CVC+TW T++  P F K+H  +
Sbjct: 93  PFPIATDVLLRLPIKSVLVCKCVCRTWNTVISDPHFAKVHFER 135