BLASTX nr result

ID: Coptis24_contig00026388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026388
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-36
ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-35
ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258...   135   1e-34
ref|XP_002515683.1| conserved hypothetical protein [Ricinus comm...   127   4e-34
ref|XP_003602296.1| Neuroblastoma-amplified sequence [Medicago t...   124   3e-33

>ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|222858473|gb|EEE96020.1|
            predicted protein [Populus trichocarpa]
          Length = 2414

 Score =  130 bits (326), Expect(2) = 8e-36
 Identities = 70/117 (59%), Positives = 79/117 (67%), Gaps = 21/117 (17%)
 Frame = -2

Query: 292  GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113
            G  L+ Y VP PM+FFLEA +D+K V+QILRLILSKF RR PG+ D DWANMW D+Q L+
Sbjct: 913  GRLLALYQVPKPMNFFLEAHADEKGVKQILRLILSKFVRRQPGRSDNDWANMWHDLQCLR 972

Query: 112  EKVFPFLDLE*MLMEFCRGLLKAVKFS---------------------LVIQAAREY 5
            EK FPFLD E ML+EFCRGLLKA KFS                     LVIQAAREY
Sbjct: 973  EKAFPFLDPEYMLVEFCRGLLKAGKFSLARNYLKGTSSVALASEKAENLVIQAAREY 1029



 Score = 45.4 bits (106), Expect(2) = 8e-36
 Identities = 19/38 (50%), Positives = 29/38 (76%)
 Frame = -1

Query: 389 SILSKLPKVKDAGSRAESLEKQIKAAEGHVQAGRVFVI 276
           ++LSKLP+ +D G   E LEK++K AEGH++AGR+  +
Sbjct: 881 ALLSKLPQKQDVGISIEHLEKRLKLAEGHIEAGRLLAL 918


>ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1|
            predicted protein [Populus trichocarpa]
          Length = 2421

 Score =  130 bits (327), Expect(2) = 1e-35
 Identities = 70/117 (59%), Positives = 79/117 (67%), Gaps = 21/117 (17%)
 Frame = -2

Query: 292  GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113
            G  L+ Y VP PM FFLEA +D+K V+QILRLILSKF RR PG+ D DWANMWRD+Q L+
Sbjct: 922  GRLLALYQVPKPMKFFLEAHADEKGVKQILRLILSKFVRRQPGRSDNDWANMWRDVQCLR 981

Query: 112  EKVFPFLDLE*MLMEFCRGLLKAVKFS---------------------LVIQAAREY 5
            EK FPFLD E ML+EFCRG+LKA KFS                     LVIQAAREY
Sbjct: 982  EKAFPFLDPEYMLVEFCRGMLKAGKFSLARNYLKGTSSVALASEKAENLVIQAAREY 1038



 Score = 44.7 bits (104), Expect(2) = 1e-35
 Identities = 18/38 (47%), Positives = 29/38 (76%)
 Frame = -1

Query: 389  SILSKLPKVKDAGSRAESLEKQIKAAEGHVQAGRVFVI 276
            ++L+KLP+ +D G   E LEK++K AEGH++AGR+  +
Sbjct: 890  ALLTKLPQKQDVGISIEGLEKRLKLAEGHIEAGRLLAL 927


>ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258836 [Vitis vinifera]
          Length = 2390

 Score =  135 bits (341), Expect(2) = 1e-34
 Identities = 73/117 (62%), Positives = 81/117 (69%), Gaps = 21/117 (17%)
 Frame = -2

Query: 292  GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113
            G  L++Y VP P++FF+EA SD+K V+QILRLILSKF RR P + D DWANMWRDMQ LQ
Sbjct: 900  GRLLAYYQVPKPLNFFVEAHSDEKGVKQILRLILSKFVRRQPSRSDNDWANMWRDMQYLQ 959

Query: 112  EKVFPFLDLE*MLMEFCRGLLKAVKFS---------------------LVIQAAREY 5
            EKVFPFLDLE ML EFCRGLLKA KFS                     LVIQAAREY
Sbjct: 960  EKVFPFLDLEYMLTEFCRGLLKAGKFSLARNYLKGTGPVSLASEKAENLVIQAAREY 1016



 Score = 35.8 bits (81), Expect(2) = 1e-34
 Identities = 18/35 (51%), Positives = 26/35 (74%)
 Frame = -1

Query: 389 SILSKLPKVKDAGSRAESLEKQIKAAEGHVQAGRV 285
           +ILSKLP V+  G     LE+++K AEGH++AGR+
Sbjct: 870 AILSKLPHVQ--GKLCCGLEQRLKLAEGHIEAGRL 902


>ref|XP_002515683.1| conserved hypothetical protein [Ricinus communis]
            gi|223545226|gb|EEF46735.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2429

 Score =  127 bits (320), Expect(2) = 4e-34
 Identities = 64/97 (65%), Positives = 76/97 (78%)
 Frame = -2

Query: 292  GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113
            G  L+FY VP PM+FFLEA +D+K ++QILRL+LSKF RR PG+ D DWA+MWRDMQ L+
Sbjct: 929  GRLLAFYQVPKPMNFFLEAHADEKGIKQILRLMLSKFVRRQPGRSDNDWASMWRDMQNLR 988

Query: 112  EKVFPFLDLE*MLMEFCRGLLKAVKFSLVIQAAREYL 2
            +K FPFLD E ML EFCRGLLKA +FSL    AR YL
Sbjct: 989  DKAFPFLDPEYMLTEFCRGLLKAGRFSL----ARNYL 1021



 Score = 42.0 bits (97), Expect(2) = 4e-34
 Identities = 18/35 (51%), Positives = 27/35 (77%)
 Frame = -1

Query: 389  SILSKLPKVKDAGSRAESLEKQIKAAEGHVQAGRV 285
            +ILSKLP+ +DA      LE+++K AEGH++AGR+
Sbjct: 897  AILSKLPRKQDAEMYTNGLEERLKVAEGHIEAGRL 931


>ref|XP_003602296.1| Neuroblastoma-amplified sequence [Medicago truncatula]
            gi|355491344|gb|AES72547.1| Neuroblastoma-amplified
            sequence [Medicago truncatula]
          Length = 2401

 Score =  124 bits (312), Expect(2) = 3e-33
 Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 21/117 (17%)
 Frame = -2

Query: 292  GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113
            G  L+FY VP P++FF  A+ D+K V+QI+RLILSKF RR PG+ D +WA+MWRDMQ L+
Sbjct: 903  GRLLAFYQVPKPLNFFPGAQLDEKGVKQIIRLILSKFIRRQPGRSDSEWASMWRDMQYLR 962

Query: 112  EKVFPFLDLE*MLMEFCRGLLKAVKF---------------------SLVIQAAREY 5
            EK FPFLDLE +L+EFCRGLLKA KF                     SLVIQAAREY
Sbjct: 963  EKAFPFLDLEYILIEFCRGLLKAGKFSLARNYLKGTSSVSLASEKAESLVIQAAREY 1019



 Score = 42.4 bits (98), Expect(2) = 3e-33
 Identities = 20/38 (52%), Positives = 31/38 (81%), Gaps = 3/38 (7%)
 Frame = -1

Query: 389 SILSKLPKVK---DAGSRAESLEKQIKAAEGHVQAGRV 285
           +ILSKLP++    D+  +AESLEK+++ AEGH++AGR+
Sbjct: 868 AILSKLPQMHGELDSAIQAESLEKRLRVAEGHIEAGRL 905


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