BLASTX nr result
ID: Coptis24_contig00026388
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026388 (389 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|2... 130 8e-36 ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2... 130 1e-35 ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258... 135 1e-34 ref|XP_002515683.1| conserved hypothetical protein [Ricinus comm... 127 4e-34 ref|XP_003602296.1| Neuroblastoma-amplified sequence [Medicago t... 124 3e-33 >ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|222858473|gb|EEE96020.1| predicted protein [Populus trichocarpa] Length = 2414 Score = 130 bits (326), Expect(2) = 8e-36 Identities = 70/117 (59%), Positives = 79/117 (67%), Gaps = 21/117 (17%) Frame = -2 Query: 292 GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113 G L+ Y VP PM+FFLEA +D+K V+QILRLILSKF RR PG+ D DWANMW D+Q L+ Sbjct: 913 GRLLALYQVPKPMNFFLEAHADEKGVKQILRLILSKFVRRQPGRSDNDWANMWHDLQCLR 972 Query: 112 EKVFPFLDLE*MLMEFCRGLLKAVKFS---------------------LVIQAAREY 5 EK FPFLD E ML+EFCRGLLKA KFS LVIQAAREY Sbjct: 973 EKAFPFLDPEYMLVEFCRGLLKAGKFSLARNYLKGTSSVALASEKAENLVIQAAREY 1029 Score = 45.4 bits (106), Expect(2) = 8e-36 Identities = 19/38 (50%), Positives = 29/38 (76%) Frame = -1 Query: 389 SILSKLPKVKDAGSRAESLEKQIKAAEGHVQAGRVFVI 276 ++LSKLP+ +D G E LEK++K AEGH++AGR+ + Sbjct: 881 ALLSKLPQKQDVGISIEHLEKRLKLAEGHIEAGRLLAL 918 >ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1| predicted protein [Populus trichocarpa] Length = 2421 Score = 130 bits (327), Expect(2) = 1e-35 Identities = 70/117 (59%), Positives = 79/117 (67%), Gaps = 21/117 (17%) Frame = -2 Query: 292 GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113 G L+ Y VP PM FFLEA +D+K V+QILRLILSKF RR PG+ D DWANMWRD+Q L+ Sbjct: 922 GRLLALYQVPKPMKFFLEAHADEKGVKQILRLILSKFVRRQPGRSDNDWANMWRDVQCLR 981 Query: 112 EKVFPFLDLE*MLMEFCRGLLKAVKFS---------------------LVIQAAREY 5 EK FPFLD E ML+EFCRG+LKA KFS LVIQAAREY Sbjct: 982 EKAFPFLDPEYMLVEFCRGMLKAGKFSLARNYLKGTSSVALASEKAENLVIQAAREY 1038 Score = 44.7 bits (104), Expect(2) = 1e-35 Identities = 18/38 (47%), Positives = 29/38 (76%) Frame = -1 Query: 389 SILSKLPKVKDAGSRAESLEKQIKAAEGHVQAGRVFVI 276 ++L+KLP+ +D G E LEK++K AEGH++AGR+ + Sbjct: 890 ALLTKLPQKQDVGISIEGLEKRLKLAEGHIEAGRLLAL 927 >ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258836 [Vitis vinifera] Length = 2390 Score = 135 bits (341), Expect(2) = 1e-34 Identities = 73/117 (62%), Positives = 81/117 (69%), Gaps = 21/117 (17%) Frame = -2 Query: 292 GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113 G L++Y VP P++FF+EA SD+K V+QILRLILSKF RR P + D DWANMWRDMQ LQ Sbjct: 900 GRLLAYYQVPKPLNFFVEAHSDEKGVKQILRLILSKFVRRQPSRSDNDWANMWRDMQYLQ 959 Query: 112 EKVFPFLDLE*MLMEFCRGLLKAVKFS---------------------LVIQAAREY 5 EKVFPFLDLE ML EFCRGLLKA KFS LVIQAAREY Sbjct: 960 EKVFPFLDLEYMLTEFCRGLLKAGKFSLARNYLKGTGPVSLASEKAENLVIQAAREY 1016 Score = 35.8 bits (81), Expect(2) = 1e-34 Identities = 18/35 (51%), Positives = 26/35 (74%) Frame = -1 Query: 389 SILSKLPKVKDAGSRAESLEKQIKAAEGHVQAGRV 285 +ILSKLP V+ G LE+++K AEGH++AGR+ Sbjct: 870 AILSKLPHVQ--GKLCCGLEQRLKLAEGHIEAGRL 902 >ref|XP_002515683.1| conserved hypothetical protein [Ricinus communis] gi|223545226|gb|EEF46735.1| conserved hypothetical protein [Ricinus communis] Length = 2429 Score = 127 bits (320), Expect(2) = 4e-34 Identities = 64/97 (65%), Positives = 76/97 (78%) Frame = -2 Query: 292 GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113 G L+FY VP PM+FFLEA +D+K ++QILRL+LSKF RR PG+ D DWA+MWRDMQ L+ Sbjct: 929 GRLLAFYQVPKPMNFFLEAHADEKGIKQILRLMLSKFVRRQPGRSDNDWASMWRDMQNLR 988 Query: 112 EKVFPFLDLE*MLMEFCRGLLKAVKFSLVIQAAREYL 2 +K FPFLD E ML EFCRGLLKA +FSL AR YL Sbjct: 989 DKAFPFLDPEYMLTEFCRGLLKAGRFSL----ARNYL 1021 Score = 42.0 bits (97), Expect(2) = 4e-34 Identities = 18/35 (51%), Positives = 27/35 (77%) Frame = -1 Query: 389 SILSKLPKVKDAGSRAESLEKQIKAAEGHVQAGRV 285 +ILSKLP+ +DA LE+++K AEGH++AGR+ Sbjct: 897 AILSKLPRKQDAEMYTNGLEERLKVAEGHIEAGRL 931 >ref|XP_003602296.1| Neuroblastoma-amplified sequence [Medicago truncatula] gi|355491344|gb|AES72547.1| Neuroblastoma-amplified sequence [Medicago truncatula] Length = 2401 Score = 124 bits (312), Expect(2) = 3e-33 Identities = 67/117 (57%), Positives = 80/117 (68%), Gaps = 21/117 (17%) Frame = -2 Query: 292 GGFLSFY*VPIPMSFFLEARSDQKSVRQILRLILSKFGRRHPGKLDGDWANMWRDMQLLQ 113 G L+FY VP P++FF A+ D+K V+QI+RLILSKF RR PG+ D +WA+MWRDMQ L+ Sbjct: 903 GRLLAFYQVPKPLNFFPGAQLDEKGVKQIIRLILSKFIRRQPGRSDSEWASMWRDMQYLR 962 Query: 112 EKVFPFLDLE*MLMEFCRGLLKAVKF---------------------SLVIQAAREY 5 EK FPFLDLE +L+EFCRGLLKA KF SLVIQAAREY Sbjct: 963 EKAFPFLDLEYILIEFCRGLLKAGKFSLARNYLKGTSSVSLASEKAESLVIQAAREY 1019 Score = 42.4 bits (98), Expect(2) = 3e-33 Identities = 20/38 (52%), Positives = 31/38 (81%), Gaps = 3/38 (7%) Frame = -1 Query: 389 SILSKLPKVK---DAGSRAESLEKQIKAAEGHVQAGRV 285 +ILSKLP++ D+ +AESLEK+++ AEGH++AGR+ Sbjct: 868 AILSKLPQMHGELDSAIQAESLEKRLRVAEGHIEAGRL 905