BLASTX nr result

ID: Coptis24_contig00026341 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026341
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...   101   7e-20
emb|CBI17106.3| unnamed protein product [Vitis vinifera]              101   7e-20
gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]       95   7e-18
ref|XP_002463728.1| hypothetical protein SORBIDRAFT_01g004920 [S...    94   9e-18
sp|Q852N2.1|AGO13_ORYSJ RecName: Full=Protein argonaute 13; Shor...    92   6e-17

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
           vinifera]
          Length = 1038

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/73 (61%), Positives = 58/73 (79%)
 Frame = -3

Query: 219 LTHRKEGRRNKISGITTQPIEQLMFTVDEGGQRMSVAQYFLDKYHVKLRYGHWPALQAGS 40
           LTHR+  +R KI+G+++QP  QLMFT+D+   R+SV QYF  KY++ L+Y  WP+LQAGS
Sbjct: 424 LTHREFAKRYKIAGVSSQPTNQLMFTLDDEATRVSVVQYFRQKYNIVLKYPSWPSLQAGS 483

Query: 39  DSKPAYLPMEVCK 1
           DSKP YLPMEVCK
Sbjct: 484 DSKPIYLPMEVCK 496


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/73 (61%), Positives = 58/73 (79%)
 Frame = -3

Query: 219 LTHRKEGRRNKISGITTQPIEQLMFTVDEGGQRMSVAQYFLDKYHVKLRYGHWPALQAGS 40
           LTHR+  +R KI+G+++QP  QLMFT+D+   R+SV QYF  KY++ L+Y  WP+LQAGS
Sbjct: 418 LTHREFAKRYKIAGVSSQPTNQLMFTLDDEATRVSVVQYFRQKYNIVLKYPSWPSLQAGS 477

Query: 39  DSKPAYLPMEVCK 1
           DSKP YLPMEVCK
Sbjct: 478 DSKPIYLPMEVCK 490


>gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]
          Length = 941

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = -3

Query: 216 THRKEG-RRNKISGITTQPIEQLMFTVDEGGQRMSVAQYFLDKYHVKLRYGHWPALQAGS 40
           TH+++  RR KI+GIT  P+ QL+F VD+ G R +V QYFLDKY  +L+Y  WP LQAGS
Sbjct: 412 THQQDQIRRYKITGITPIPMSQLIFPVDDKGTRKTVVQYFLDKYDYRLKYVSWPCLQAGS 471

Query: 39  DSKPAYLPMEVCK 1
           DS+P YLPMEVCK
Sbjct: 472 DSRPVYLPMEVCK 484


>ref|XP_002463728.1| hypothetical protein SORBIDRAFT_01g004920 [Sorghum bicolor]
           gi|241917582|gb|EER90726.1| hypothetical protein
           SORBIDRAFT_01g004920 [Sorghum bicolor]
          Length = 1067

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/73 (58%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = -3

Query: 216 THRKEG-RRNKISGITTQPIEQLMFTVDEGGQRMSVAQYFLDKYHVKLRYGHWPALQAGS 40
           TH+++  RR KI+G+T+ P+ QL+F VD+ G R +V QYF DKY+  L++G WP LQAGS
Sbjct: 451 THQQDQIRRYKITGVTSIPMSQLIFPVDDKGTRKTVVQYFWDKYNYSLKHGSWPCLQAGS 510

Query: 39  DSKPAYLPMEVCK 1
           DS+P YLPMEVCK
Sbjct: 511 DSRPVYLPMEVCK 523


>sp|Q852N2.1|AGO13_ORYSJ RecName: Full=Protein argonaute 13; Short=OsAGO13
           gi|27819513|gb|AAO24917.1| putative argonaute protein
           [Oryza sativa Japonica Group]
          Length = 1192

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/66 (60%), Positives = 51/66 (77%)
 Frame = -3

Query: 198 RRNKISGITTQPIEQLMFTVDEGGQRMSVAQYFLDKYHVKLRYGHWPALQAGSDSKPAYL 19
           RR KI+GIT  P+ QL+F VD+ G R +V QYF D+Y+ +L+Y  WP LQ+GSDS+P YL
Sbjct: 228 RRYKITGITPIPMSQLIFPVDDNGTRKTVVQYFWDRYNYRLKYASWPCLQSGSDSRPVYL 287

Query: 18  PMEVCK 1
           PMEVCK
Sbjct: 288 PMEVCK 293


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