BLASTX nr result
ID: Coptis24_contig00026331
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026331 (395 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 181 5e-44 emb|CBI32069.3| unnamed protein product [Vitis vinifera] 181 5e-44 ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 173 1e-41 gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth... 172 2e-41 ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|2... 170 1e-40 >ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Vitis vinifera] Length = 1174 Score = 181 bits (459), Expect = 5e-44 Identities = 88/133 (66%), Positives = 103/133 (77%), Gaps = 2/133 (1%) Frame = +3 Query: 3 YLVSAVYLGKVDSLYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSD 176 +LV AVYLGKVDS GSKVK+M+ +D F L + E + D + KPSY++ALGSD Sbjct: 764 HLVPAVYLGKVDSFDGSKVKNMVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSD 823 Query: 177 NSWYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCM 356 NSWYLFTEKWIKTVYR G PNV LAQGDALPRE++ LL K IQW++LA SE GGLWC+ Sbjct: 824 NSWYLFTEKWIKTVYRTGFPNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCI 883 Query: 357 EGSLDTWSWSLNV 395 EGSL+TWSWSLNV Sbjct: 884 EGSLETWSWSLNV 896 >emb|CBI32069.3| unnamed protein product [Vitis vinifera] Length = 1064 Score = 181 bits (459), Expect = 5e-44 Identities = 88/133 (66%), Positives = 103/133 (77%), Gaps = 2/133 (1%) Frame = +3 Query: 3 YLVSAVYLGKVDSLYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSD 176 +LV AVYLGKVDS GSKVK+M+ +D F L + E + D + KPSY++ALGSD Sbjct: 654 HLVPAVYLGKVDSFDGSKVKNMVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSD 713 Query: 177 NSWYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCM 356 NSWYLFTEKWIKTVYR G PNV LAQGDALPRE++ LL K IQW++LA SE GGLWC+ Sbjct: 714 NSWYLFTEKWIKTVYRTGFPNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCI 773 Query: 357 EGSLDTWSWSLNV 395 EGSL+TWSWSLNV Sbjct: 774 EGSLETWSWSLNV 786 >ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Glycine max] Length = 1162 Score = 173 bits (439), Expect = 1e-41 Identities = 86/131 (65%), Positives = 99/131 (75%), Gaps = 2/131 (1%) Frame = +3 Query: 9 VSAVYLGKVDSLYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSDNS 182 + AV+LGKVDSL SK+K MI DSF L + E D + D KPSYH+ALGSDN+ Sbjct: 754 IPAVFLGKVDSLNASKLKDMISSVDSFALNLADAEPSVADSELKDDLKPSYHVALGSDNT 813 Query: 183 WYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCMEG 362 WYLFTEKWIKTVY G PNVPLA+GDA PRE++ LL KE ++WDKL+ SE GGLW MEG Sbjct: 814 WYLFTEKWIKTVYGTGFPNVPLAEGDARPREIMSILLDKEDMKWDKLSHSEHGGLWFMEG 873 Query: 363 SLDTWSWSLNV 395 SLDTWSWSLNV Sbjct: 874 SLDTWSWSLNV 884 >gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana] Length = 1159 Score = 172 bits (437), Expect = 2e-41 Identities = 86/133 (64%), Positives = 102/133 (76%), Gaps = 2/133 (1%) Frame = +3 Query: 3 YLVSAVYLGKVDSLYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSD 176 +LV+AVYLGKVD+L K+KSM+ D+F L + F+ GD D KPSYH+ALGSD Sbjct: 750 HLVAAVYLGKVDTLNIEKLKSMVRDYDAFALKTVVENFEVGDIGGE-DVKPSYHVALGSD 808 Query: 177 NSWYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCM 356 NSWYLFTEKWI+ VYR G PNV LA GDALPRE++ LL K ++QW KLA SE GGLWC+ Sbjct: 809 NSWYLFTEKWIRMVYRTGFPNVALALGDALPREIMTELLDKAEMQWQKLAVSELGGLWCL 868 Query: 357 EGSLDTWSWSLNV 395 EGSL+TWSWSLNV Sbjct: 869 EGSLETWSWSLNV 881 >ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|222864743|gb|EEF01874.1| predicted protein [Populus trichocarpa] Length = 736 Score = 170 bits (431), Expect = 1e-40 Identities = 82/131 (62%), Positives = 98/131 (74%), Gaps = 2/131 (1%) Frame = +3 Query: 9 VSAVYLGKVDSLYGSKVKSMIDVDDSFV--LMEREFDHGDDKEHVDAKPSYHIALGSDNS 182 V AVYLG DS GSK K+M+ DS + E + + + H D +PSYH+ALGSDNS Sbjct: 328 VPAVYLGNADSFDGSKFKNMVSDIDSLAQNVAPIESNVSEVETHKDVEPSYHVALGSDNS 387 Query: 183 WYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCMEG 362 WYLFTEKWIKTVYR GLPNV L+ GD LP E++W LL +E+ QW+KLA+SE GGLW MEG Sbjct: 388 WYLFTEKWIKTVYRTGLPNVALSLGDDLPHEVMWMLLDREEKQWEKLAESELGGLWYMEG 447 Query: 363 SLDTWSWSLNV 395 SL+TWSWSLNV Sbjct: 448 SLETWSWSLNV 458