BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026331
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   181   5e-44
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              181   5e-44
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   173   1e-41
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   172   2e-41
ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/133 (66%), Positives = 103/133 (77%), Gaps = 2/133 (1%)
 Frame = +3

Query: 3    YLVSAVYLGKVDSLYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSD 176
            +LV AVYLGKVDS  GSKVK+M+  +D F L  +  E +  D     + KPSY++ALGSD
Sbjct: 764  HLVPAVYLGKVDSFDGSKVKNMVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSD 823

Query: 177  NSWYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCM 356
            NSWYLFTEKWIKTVYR G PNV LAQGDALPRE++  LL K  IQW++LA SE GGLWC+
Sbjct: 824  NSWYLFTEKWIKTVYRTGFPNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCI 883

Query: 357  EGSLDTWSWSLNV 395
            EGSL+TWSWSLNV
Sbjct: 884  EGSLETWSWSLNV 896


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  181 bits (459), Expect = 5e-44
 Identities = 88/133 (66%), Positives = 103/133 (77%), Gaps = 2/133 (1%)
 Frame = +3

Query: 3    YLVSAVYLGKVDSLYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSD 176
            +LV AVYLGKVDS  GSKVK+M+  +D F L  +  E +  D     + KPSY++ALGSD
Sbjct: 654  HLVPAVYLGKVDSFDGSKVKNMVYTNDCFALNAVVTELNVDDTDSQPNGKPSYYVALGSD 713

Query: 177  NSWYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCM 356
            NSWYLFTEKWIKTVYR G PNV LAQGDALPRE++  LL K  IQW++LA SE GGLWC+
Sbjct: 714  NSWYLFTEKWIKTVYRTGFPNVALAQGDALPREIMRALLDKADIQWEELAKSELGGLWCI 773

Query: 357  EGSLDTWSWSLNV 395
            EGSL+TWSWSLNV
Sbjct: 774  EGSLETWSWSLNV 786


>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Glycine max]
          Length = 1162

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/131 (65%), Positives = 99/131 (75%), Gaps = 2/131 (1%)
 Frame = +3

Query: 9    VSAVYLGKVDSLYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSDNS 182
            + AV+LGKVDSL  SK+K MI   DSF L   + E    D +   D KPSYH+ALGSDN+
Sbjct: 754  IPAVFLGKVDSLNASKLKDMISSVDSFALNLADAEPSVADSELKDDLKPSYHVALGSDNT 813

Query: 183  WYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCMEG 362
            WYLFTEKWIKTVY  G PNVPLA+GDA PRE++  LL KE ++WDKL+ SE GGLW MEG
Sbjct: 814  WYLFTEKWIKTVYGTGFPNVPLAEGDARPREIMSILLDKEDMKWDKLSHSEHGGLWFMEG 873

Query: 363  SLDTWSWSLNV 395
            SLDTWSWSLNV
Sbjct: 874  SLDTWSWSLNV 884


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  172 bits (437), Expect = 2e-41
 Identities = 86/133 (64%), Positives = 102/133 (76%), Gaps = 2/133 (1%)
 Frame = +3

Query: 3    YLVSAVYLGKVDSLYGSKVKSMIDVDDSFVL--MEREFDHGDDKEHVDAKPSYHIALGSD 176
            +LV+AVYLGKVD+L   K+KSM+   D+F L  +   F+ GD     D KPSYH+ALGSD
Sbjct: 750  HLVAAVYLGKVDTLNIEKLKSMVRDYDAFALKTVVENFEVGDIGGE-DVKPSYHVALGSD 808

Query: 177  NSWYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCM 356
            NSWYLFTEKWI+ VYR G PNV LA GDALPRE++  LL K ++QW KLA SE GGLWC+
Sbjct: 809  NSWYLFTEKWIRMVYRTGFPNVALALGDALPREIMTELLDKAEMQWQKLAVSELGGLWCL 868

Query: 357  EGSLDTWSWSLNV 395
            EGSL+TWSWSLNV
Sbjct: 869  EGSLETWSWSLNV 881


>ref|XP_002315703.1| predicted protein [Populus trichocarpa] gi|222864743|gb|EEF01874.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  170 bits (431), Expect = 1e-40
 Identities = 82/131 (62%), Positives = 98/131 (74%), Gaps = 2/131 (1%)
 Frame = +3

Query: 9   VSAVYLGKVDSLYGSKVKSMIDVDDSFV--LMEREFDHGDDKEHVDAKPSYHIALGSDNS 182
           V AVYLG  DS  GSK K+M+   DS    +   E +  + + H D +PSYH+ALGSDNS
Sbjct: 328 VPAVYLGNADSFDGSKFKNMVSDIDSLAQNVAPIESNVSEVETHKDVEPSYHVALGSDNS 387

Query: 183 WYLFTEKWIKTVYRIGLPNVPLAQGDALPRELIWRLLGKEQIQWDKLADSEFGGLWCMEG 362
           WYLFTEKWIKTVYR GLPNV L+ GD LP E++W LL +E+ QW+KLA+SE GGLW MEG
Sbjct: 388 WYLFTEKWIKTVYRTGLPNVALSLGDDLPHEVMWMLLDREEKQWEKLAESELGGLWYMEG 447

Query: 363 SLDTWSWSLNV 395
           SL+TWSWSLNV
Sbjct: 448 SLETWSWSLNV 458