BLASTX nr result

ID: Coptis24_contig00026320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026320
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465091.1| hypothetical protein SORBIDRAFT_01g031920 [S...    60   2e-07
tpg|DAA45879.1| TPA: hypothetical protein ZEAMMB73_885124 [Zea m...    59   5e-07
ref|NP_001254622.1| zinc finger protein ZAT10-like [Glycine max]...    58   7e-07
gb|ACU20715.1| unknown [Glycine max]                                   58   7e-07
gb|ACI23460.1| putative Cys2-His2 type zinc finger protein [Glyc...    58   7e-07

>ref|XP_002465091.1| hypothetical protein SORBIDRAFT_01g031920 [Sorghum bicolor]
           gi|241918945|gb|EER92089.1| hypothetical protein
           SORBIDRAFT_01g031920 [Sorghum bicolor]
          Length = 207

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +3

Query: 96  QKTLVKFECPKCHKSFPSHQALGGRVSSHNKRSKDC-SEITHTEISARANEPATKVTQVG 272
           Q++ ++F C  C K+F SHQALGG  +SH K +    ++ + +     A   +   T  G
Sbjct: 46  QESELRFRCSVCGKAFASHQALGGHKASHRKPTPVLQAQASSSSAGGAAASSSGITTSAG 105

Query: 273 DSKGEGSYQCKMCDKSFDTGQ 335
            S G+G ++C +C +SF TGQ
Sbjct: 106 GSSGQGRHRCTVCHRSFATGQ 126


>tpg|DAA45879.1| TPA: hypothetical protein ZEAMMB73_885124 [Zea mays]
          Length = 178

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/80 (36%), Positives = 45/80 (56%)
 Frame = +3

Query: 96  QKTLVKFECPKCHKSFPSHQALGGRVSSHNKRSKDCSEITHTEISARANEPATKVTQVGD 275
           Q+  ++F C  C K+F SHQALGG  +SH K        TH + + +A+  +   +  G 
Sbjct: 39  QECELRFRCSVCGKAFASHQALGGHKASHRKP-------THLQ-TQQASSSSVTTSSAGS 90

Query: 276 SKGEGSYQCKMCDKSFDTGQ 335
             G+G ++C +C +SF TGQ
Sbjct: 91  GGGQGRHRCSVCHRSFATGQ 110


>ref|NP_001254622.1| zinc finger protein ZAT10-like [Glycine max]
           gi|388525011|gb|AFK50425.1| C2H2-type zinc finger
           protein [Glycine max]
          Length = 233

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/78 (38%), Positives = 44/78 (56%)
 Frame = +3

Query: 102 TLVKFECPKCHKSFPSHQALGGRVSSHNKRSKDCSEITHTEISARANEPATKVTQVGDSK 281
           T + ++C  C+KSFPS+QALGG  +SH K +    E   T  S+ A+   T       + 
Sbjct: 74  TKLSYKCSVCNKSFPSYQALGGHKASHRKLAASGGEDQPTTTSSAASSANT-------AS 126

Query: 282 GEGSYQCKMCDKSFDTGQ 335
           G  +++C +C KSF TGQ
Sbjct: 127 GGRTHECSICHKSFPTGQ 144


>gb|ACU20715.1| unknown [Glycine max]
          Length = 215

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/78 (38%), Positives = 44/78 (56%)
 Frame = +3

Query: 102 TLVKFECPKCHKSFPSHQALGGRVSSHNKRSKDCSEITHTEISARANEPATKVTQVGDSK 281
           T + ++C  C+KSFPS+QALGG  +SH K +    E   T  S+ A+   T       + 
Sbjct: 74  TKLSYKCSVCNKSFPSYQALGGHKASHRKLAASGGEDQPTTTSSAASSANT-------AS 126

Query: 282 GEGSYQCKMCDKSFDTGQ 335
           G  +++C +C KSF TGQ
Sbjct: 127 GGRTHECSICHKSFPTGQ 144


>gb|ACI23460.1| putative Cys2-His2 type zinc finger protein [Glycine soja]
          Length = 233

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/78 (38%), Positives = 44/78 (56%)
 Frame = +3

Query: 102 TLVKFECPKCHKSFPSHQALGGRVSSHNKRSKDCSEITHTEISARANEPATKVTQVGDSK 281
           T + ++C  C+KSFPS+QALGG  +SH K +    E   T  S+ A+   T       + 
Sbjct: 74  TKLSYKCSVCNKSFPSYQALGGHKASHRKLAASGGEDQPTTTSSAASSANT-------AS 126

Query: 282 GEGSYQCKMCDKSFDTGQ 335
           G  +++C +C KSF TGQ
Sbjct: 127 GGRTHECSICHKSFPTGQ 144


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