BLASTX nr result
ID: Coptis24_contig00026311
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026311 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24863.3| unnamed protein product [Vitis vinifera] 64 2e-08 ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like prote... 64 2e-08 ref|XP_002299952.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-08 ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Me... 63 3e-08 gb|AFK41594.1| unknown [Medicago truncatula] 63 3e-08 >emb|CBI24863.3| unnamed protein product [Vitis vinifera] Length = 107 Score = 63.5 bits (153), Expect = 2e-08 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = -1 Query: 264 VCRGTAVMLVSPTDGTDEIANPFIQPDGA 178 VCRGTAVMLVSPTDGTDEIANPFIQPDGA Sbjct: 79 VCRGTAVMLVSPTDGTDEIANPFIQPDGA 107 >ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 1 [Vitis vinifera] gi|359487265|ref|XP_003633552.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 2 [Vitis vinifera] gi|359487267|ref|XP_003633553.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 3 [Vitis vinifera] gi|359487269|ref|XP_003633554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform 4 [Vitis vinifera] Length = 99 Score = 63.5 bits (153), Expect = 2e-08 Identities = 29/29 (100%), Positives = 29/29 (100%) Frame = -1 Query: 264 VCRGTAVMLVSPTDGTDEIANPFIQPDGA 178 VCRGTAVMLVSPTDGTDEIANPFIQPDGA Sbjct: 71 VCRGTAVMLVSPTDGTDEIANPFIQPDGA 99 >ref|XP_002299952.1| predicted protein [Populus trichocarpa] gi|224104033|ref|XP_002313290.1| predicted protein [Populus trichocarpa] gi|118483640|gb|ABK93714.1| unknown [Populus trichocarpa] gi|222847210|gb|EEE84757.1| predicted protein [Populus trichocarpa] gi|222849698|gb|EEE87245.1| predicted protein [Populus trichocarpa] Length = 99 Score = 63.2 bits (152), Expect = 2e-08 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = -1 Query: 264 VCRGTAVMLVSPTDGTDEIANPFIQPDGA 178 VCRGTAVMLVSPTDGTDEIANPF+QPDGA Sbjct: 71 VCRGTAVMLVSPTDGTDEIANPFVQPDGA 99 >ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Medicago truncatula] gi|355498170|gb|AES79373.1| U6 snRNA-associated Sm-like protein LSm7 [Medicago truncatula] Length = 130 Score = 62.8 bits (151), Expect = 3e-08 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = -1 Query: 264 VCRGTAVMLVSPTDGTDEIANPFIQPDGA 178 VCRGTAVMLVSPTDGTDEIANPF+QPDGA Sbjct: 102 VCRGTAVMLVSPTDGTDEIANPFLQPDGA 130 >gb|AFK41594.1| unknown [Medicago truncatula] Length = 99 Score = 62.8 bits (151), Expect = 3e-08 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = -1 Query: 264 VCRGTAVMLVSPTDGTDEIANPFIQPDGA 178 VCRGTAVMLVSPTDGTDEIANPF+QPDGA Sbjct: 71 VCRGTAVMLVSPTDGTDEIANPFLQPDGA 99