BLASTX nr result
ID: Coptis24_contig00026301
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026301 (635 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repe... 123 2e-26 emb|CBI26580.3| unnamed protein product [Vitis vinifera] 123 2e-26 ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24 ref|XP_002321785.1| predicted protein [Populus trichocarpa] gi|2... 113 3e-23 emb|CAN70132.1| hypothetical protein VITISV_030400 [Vitis vinifera] 105 5e-21 >ref|XP_003634016.1| PREDICTED: LOW QUALITY PROTEIN: ankyrin repeat-containing protein At2g01680-like [Vitis vinifera] Length = 450 Score = 123 bits (309), Expect = 2e-26 Identities = 71/173 (41%), Positives = 96/173 (55%), Gaps = 7/173 (4%) Frame = +3 Query: 99 AGDREIEEILRSAGGMKAQEPLSIVATQP-ASQAQVVLTDNRLDTSELSRLDQLVEYFGF 275 AGDREI+EIL SAG +AQ+ +A P +Q L + + + LV YF F Sbjct: 230 AGDREIKEILHSAGAKRAQD----IAFPPFGTQNHARLNSTTTVETCPMQPNNLVNYFRF 285 Query: 276 QTGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDSKPGDL------KPHIAGKA 437 G+DS R YQ GLSPPGGVW D+S K H AG++ Sbjct: 286 HRGRDSPGEARSALLVIAVLVATATYQVGLSPPGGVWQDNSGTNQSNSTATNKAHFAGQS 345 Query: 438 ILSSKSWIQFGSFFICNTVGFDLSLFFITVLTARFPLRLELQLCLFALTFTYH 596 I SS I FG F + N++GF +SL+ I++LT++FP+R ELQ+CL A+ FTY+ Sbjct: 346 IFSSLGIISFGIFVLFNSIGFSVSLYMISILTSKFPMRFELQICLLAMFFTYN 398 >emb|CBI26580.3| unnamed protein product [Vitis vinifera] Length = 392 Score = 123 bits (309), Expect = 2e-26 Identities = 71/173 (41%), Positives = 96/173 (55%), Gaps = 7/173 (4%) Frame = +3 Query: 99 AGDREIEEILRSAGGMKAQEPLSIVATQP-ASQAQVVLTDNRLDTSELSRLDQLVEYFGF 275 AGDREI+EIL SAG +AQ+ +A P +Q L + + + LV YF F Sbjct: 118 AGDREIKEILHSAGAKRAQD----IAFPPFGTQNHARLNSTTTVETCPMQPNNLVNYFRF 173 Query: 276 QTGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDSKPGDL------KPHIAGKA 437 G+DS R YQ GLSPPGGVW D+S K H AG++ Sbjct: 174 HRGRDSPGEARSALLVIAVLVATATYQVGLSPPGGVWQDNSGTNQSNSTATNKAHFAGQS 233 Query: 438 ILSSKSWIQFGSFFICNTVGFDLSLFFITVLTARFPLRLELQLCLFALTFTYH 596 I SS I FG F + N++GF +SL+ I++LT++FP+R ELQ+CL A+ FTY+ Sbjct: 234 IFSSLGIISFGIFVLFNSIGFSVSLYMISILTSKFPMRFELQICLLAMFFTYN 286 >ref|XP_002332335.1| predicted protein [Populus trichocarpa] gi|222832582|gb|EEE71059.1| predicted protein [Populus trichocarpa] Length = 448 Score = 117 bits (294), Expect = 1e-24 Identities = 71/172 (41%), Positives = 96/172 (55%), Gaps = 7/172 (4%) Frame = +3 Query: 99 AGDREIEEILRSAGGMKAQEPLSIVATQPASQAQVVLTDNRLDTSEL-SRLDQLVEYFGF 275 AGDREI EILRSAG M+A++ S+ +T SQ TDN S D LVEYF F Sbjct: 229 AGDREIVEILRSAGAMRARD--SVPSTVTNSQTS---TDNPSTPERCWSNRDNLVEYFKF 283 Query: 276 QTGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDSKPGDLK------PHIAGKA 437 + +DS S R +Q G+ PPGGVW D S P H AG++ Sbjct: 284 KKDRDSPSEARGTLLVIAVLVATATFQVGVGPPGGVWQDTSIPDQKNITSNNTAHFAGQS 343 Query: 438 ILSSKSWIQFGSFFICNTVGFDLSLFFITVLTARFPLRLELQLCLFALTFTY 593 I+++ + + F F N+VGF +SL+ + VLT++FPL+ ELQ+CL A+ TY Sbjct: 344 IMATTNTVGFMLFVFFNSVGFSMSLYMLYVLTSKFPLQFELQICLLAMYCTY 395 >ref|XP_002321785.1| predicted protein [Populus trichocarpa] gi|222868781|gb|EEF05912.1| predicted protein [Populus trichocarpa] Length = 255 Score = 113 bits (282), Expect = 3e-23 Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 6/171 (3%) Frame = +3 Query: 99 AGDREIEEILRSAGGMKAQEPLSIVATQPASQAQVVLTDNRLDTSELSRLDQLVEYFGFQ 278 AGDREI EILRSAG +A++ + + + T R LS + L+EYF F+ Sbjct: 36 AGDREIVEILRSAGATRARDIIQSTISNNQTSTDNTSTPERC----LSNGNNLIEYFKFK 91 Query: 279 TGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDSKP------GDLKPHIAGKAI 440 G+DS S R +Q G++PPGGVW D + P H G++I Sbjct: 92 KGRDSPSEARSTLLVIAVLVATATFQVGVNPPGGVWQDTNIPDHTNSTSSSNAHFGGQSI 151 Query: 441 LSSKSWIQFGSFFICNTVGFDLSLFFITVLTARFPLRLELQLCLFALTFTY 593 +++ + + F F N+VGF +SL+ I VLT+ FPL+ ELQ+CL A+ TY Sbjct: 152 MATTNKVGFMLFVFFNSVGFSMSLYMIYVLTSEFPLQFELQICLLAMYGTY 202 >emb|CAN70132.1| hypothetical protein VITISV_030400 [Vitis vinifera] Length = 394 Score = 105 bits (263), Expect = 5e-21 Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 6/122 (4%) Frame = +3 Query: 249 DQLVEYFGFQTGKDSSSNVRDXXXXXXXXXXXXXYQAGLSPPGGVWADDSKPGDL----- 413 + LV YF F G+DS R YQ GLSPPGGVW D+S Sbjct: 221 NNLVNYFRFHRGRDSPGEARSALLVIAVLVATATYQVGLSPPGGVWQDNSGTNQSNSTAT 280 Query: 414 -KPHIAGKAILSSKSWIQFGSFFICNTVGFDLSLFFITVLTARFPLRLELQLCLFALTFT 590 K H AG++I SS I FG F + N++GF +SL+ I++LT +FP+R ELQ+CL A+ FT Sbjct: 281 NKAHFAGQSIFSSLGIISFGIFVLFNSIGFSVSLYMISILTXKFPMRFELQICLLAMFFT 340 Query: 591 YH 596 Y+ Sbjct: 341 YN 342