BLASTX nr result

ID: Coptis24_contig00026298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026298
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282636.1| PREDICTED: origin recognition complex subuni...   259   5e-67
ref|XP_004152733.1| PREDICTED: origin recognition complex subuni...   254   1e-65
ref|XP_003558649.1| PREDICTED: origin recognition complex subuni...   245   5e-63
ref|NP_001049192.1| Os03g0184700 [Oryza sativa Japonica Group] g...   243   2e-62
gb|AFW72565.1| hypothetical protein ZEAMMB73_553492 [Zea mays]        243   3e-62

>ref|XP_002282636.1| PREDICTED: origin recognition complex subunit 2-like [Vitis
           vinifera]
          Length = 362

 Score =  259 bits (661), Expect = 5e-67
 Identities = 119/140 (85%), Positives = 132/140 (94%)
 Frame = +3

Query: 222 VWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQS 401
           +WDKKMVHTQFNW WYHVPTF PYK EG+F+PLILA GGTAQ+AKTA IVLQSLTPNAQS
Sbjct: 221 LWDKKMVHTQFNWCWYHVPTFVPYKAEGIFYPLILAHGGTAQSAKTAAIVLQSLTPNAQS 280

Query: 402 VFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADG 581
           VFKVLAEHQ+AH DEEGMP N+LY+ICRERFLVSSQITLNSHLTEF+DH+L+KTRRH+DG
Sbjct: 281 VFKVLAEHQLAHPDEEGMPVNNLYSICRERFLVSSQITLNSHLTEFKDHELIKTRRHSDG 340

Query: 582 QDCLYIPLTSEALEKLLQEI 641
           QDCLYIPL +EALEKLLQ+I
Sbjct: 341 QDCLYIPLATEALEKLLQDI 360


>ref|XP_004152733.1| PREDICTED: origin recognition complex subunit 2-like [Cucumis
           sativus] gi|449496004|ref|XP_004160009.1| PREDICTED:
           origin recognition complex subunit 2-like [Cucumis
           sativus]
          Length = 360

 Score =  254 bits (649), Expect = 1e-65
 Identities = 119/140 (85%), Positives = 130/140 (92%)
 Frame = +3

Query: 222 VWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQS 401
           +WDKKMVHTQFNW WYHVPTFAPYK+EG+FFPLILA GGTAQ+AKTA IVLQSLTPNAQS
Sbjct: 220 LWDKKMVHTQFNWLWYHVPTFAPYKIEGMFFPLILAHGGTAQSAKTATIVLQSLTPNAQS 279

Query: 402 VFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADG 581
           VFKVL EHQ++H DEEGMP + LY ICRERFLVSSQITLNSHLTEF+DH+LVKTRRH+DG
Sbjct: 280 VFKVLIEHQLSHPDEEGMPIDKLYAICRERFLVSSQITLNSHLTEFKDHELVKTRRHSDG 339

Query: 582 QDCLYIPLTSEALEKLLQEI 641
           QDCLYIPL SEALEKLL E+
Sbjct: 340 QDCLYIPLPSEALEKLLTEL 359


>ref|XP_003558649.1| PREDICTED: origin recognition complex subunit 2-like [Brachypodium
           distachyon]
          Length = 374

 Score =  245 bits (626), Expect = 5e-63
 Identities = 114/140 (81%), Positives = 129/140 (92%)
 Frame = +3

Query: 222 VWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQS 401
           +WDKKMVHTQF WSWYHVPTFAPYKVEGVF+PLILASGG AQ  KTAL+VLQSLTPNAQS
Sbjct: 234 LWDKKMVHTQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTTKTALVVLQSLTPNAQS 293

Query: 402 VFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADG 581
           VF+VLAE+Q+A+  EEGMP + LYT CRERFLVSSQ+TLNSHLTEF+DHDLVK R+H+DG
Sbjct: 294 VFRVLAEYQLANEKEEGMPVSSLYTKCRERFLVSSQVTLNSHLTEFKDHDLVKIRKHSDG 353

Query: 582 QDCLYIPLTSEALEKLLQEI 641
           QDCL+IPL S+ALEKLLQE+
Sbjct: 354 QDCLHIPLVSDALEKLLQEL 373


>ref|NP_001049192.1| Os03g0184700 [Oryza sativa Japonica Group]
           gi|108706555|gb|ABF94350.1| Origin recognition complex
           subunit 2, putative, expressed [Oryza sativa Japonica
           Group] gi|113547663|dbj|BAF11106.1| Os03g0184700 [Oryza
           sativa Japonica Group] gi|215769125|dbj|BAH01354.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218192219|gb|EEC74646.1| hypothetical protein
           OsI_10291 [Oryza sativa Indica Group]
           gi|222624324|gb|EEE58456.1| hypothetical protein
           OsJ_09689 [Oryza sativa Japonica Group]
          Length = 379

 Score =  243 bits (621), Expect = 2e-62
 Identities = 114/140 (81%), Positives = 128/140 (91%)
 Frame = +3

Query: 222 VWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQS 401
           +WDKKMVHTQF WSWYHVPTFAPYKVEGVF+PLILASGG AQ  KTAL+VLQSLTPNAQS
Sbjct: 239 LWDKKMVHTQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTMKTALVVLQSLTPNAQS 298

Query: 402 VFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADG 581
           VF+VLAE+Q+AH  EEGM  + LYT CRERFLVSSQ+TLNSHLTEF+DHDLVK R+H+DG
Sbjct: 299 VFRVLAEYQLAHEKEEGMHFSSLYTKCRERFLVSSQVTLNSHLTEFKDHDLVKIRKHSDG 358

Query: 582 QDCLYIPLTSEALEKLLQEI 641
           QDCL+IPL S+ALEKLLQE+
Sbjct: 359 QDCLHIPLVSDALEKLLQEL 378


>gb|AFW72565.1| hypothetical protein ZEAMMB73_553492 [Zea mays]
          Length = 514

 Score =  243 bits (619), Expect = 3e-62
 Identities = 113/140 (80%), Positives = 128/140 (91%)
 Frame = +3

Query: 222 VWDKKMVHTQFNWSWYHVPTFAPYKVEGVFFPLILASGGTAQNAKTALIVLQSLTPNAQS 401
           +WDKKMVH QF WSWYHVPTFAPYKVEGVF+PLILASGG AQ  KTAL+VLQSLTPNAQS
Sbjct: 374 LWDKKMVHKQFKWSWYHVPTFAPYKVEGVFYPLILASGGHAQTTKTALVVLQSLTPNAQS 433

Query: 402 VFKVLAEHQMAHSDEEGMPTNDLYTICRERFLVSSQITLNSHLTEFRDHDLVKTRRHADG 581
           VF+VLAE+Q+A+  EEGMP + LYT CRERFLVSSQ+TLN+HLTEF+DHDLVKTR+H+DG
Sbjct: 434 VFRVLAEYQLANEKEEGMPVSSLYTKCRERFLVSSQVTLNAHLTEFKDHDLVKTRKHSDG 493

Query: 582 QDCLYIPLTSEALEKLLQEI 641
           QDCL IPL S+ALEKLLQE+
Sbjct: 494 QDCLRIPLVSDALEKLLQEL 513


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