BLASTX nr result

ID: Coptis24_contig00026284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026284
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302371.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
emb|CBI19277.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   126   2e-27
ref|XP_002514051.1| Protein VERNALIZATION-INSENSITIVE, putative ...   125   3e-27
gb|ABA98812.1| Fibronectin type III domain containing protein, e...   120   2e-25

>ref|XP_002302371.1| predicted protein [Populus trichocarpa] gi|222844097|gb|EEE81644.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  132 bits (332), Expect = 3e-29
 Identities = 58/85 (68%), Positives = 73/85 (85%)
 Frame = +1

Query: 1   YEYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLV 180
           YEY VRV++WLE  GH+ +DFRVKFLTWFSLK+T++DRRVV+ FVD LIDDP SLA+QL+
Sbjct: 441 YEYSVRVVKWLELRGHIAEDFRVKFLTWFSLKATLQDRRVVNVFVDALIDDPRSLAEQLI 500

Query: 181 DTFLDEIRKEKKVIPRFGFCTQLWH 255
           DTF+D+I  +KK +P  GFCT+LWH
Sbjct: 501 DTFMDKICCDKKPVPWHGFCTKLWH 525


>emb|CBI19277.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/85 (65%), Positives = 72/85 (84%)
 Frame = +1

Query: 1   YEYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLV 180
           YEY VRVI+WLE +GH+ +DFRVKFLTWFSLK+T+++RRVVS FVDTLIDDP SLA+QL+
Sbjct: 278 YEYSVRVIKWLECQGHIAEDFRVKFLTWFSLKATMQERRVVSVFVDTLIDDPPSLAEQLI 337

Query: 181 DTFLDEIRKEKKVIPRFGFCTQLWH 255
            +F+DEI  ++K + + GFC  LWH
Sbjct: 338 HSFMDEICYDQKSVSKQGFCASLWH 362


>ref|XP_002283776.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 617

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/85 (65%), Positives = 72/85 (84%)
 Frame = +1

Query: 1   YEYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLV 180
           YEY VRVI+WLE +GH+ +DFRVKFLTWFSLK+T+++RRVVS FVDTLIDDP SLA+QL+
Sbjct: 533 YEYSVRVIKWLECQGHIAEDFRVKFLTWFSLKATMQERRVVSVFVDTLIDDPPSLAEQLI 592

Query: 181 DTFLDEIRKEKKVIPRFGFCTQLWH 255
            +F+DEI  ++K + + GFC  LWH
Sbjct: 593 HSFMDEICYDQKSVSKQGFCASLWH 617


>ref|XP_002514051.1| Protein VERNALIZATION-INSENSITIVE, putative [Ricinus communis]
           gi|223547137|gb|EEF48634.1| Protein
           VERNALIZATION-INSENSITIVE, putative [Ricinus communis]
          Length = 632

 Score =  125 bits (315), Expect = 3e-27
 Identities = 55/85 (64%), Positives = 70/85 (82%)
 Frame = +1

Query: 1   YEYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLV 180
           YEY VRV++WLE +GH+ +DFRVKFLTWFSLK+T+++RRVV+ FV+ LIDDP SLA QL+
Sbjct: 548 YEYSVRVVKWLESKGHIVEDFRVKFLTWFSLKATMQERRVVNVFVEALIDDPPSLAGQLI 607

Query: 181 DTFLDEIRKEKKVIPRFGFCTQLWH 255
            +F DEI  E+K  P  GFCT+LWH
Sbjct: 608 HSFTDEICSERKTTPEHGFCTRLWH 632


>gb|ABA98812.1| Fibronectin type III domain containing protein, expressed [Oryza
           sativa Japonica Group] gi|215697015|dbj|BAG91009.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|218186988|gb|EEC69415.1| hypothetical protein
           OsI_38576 [Oryza sativa Indica Group]
          Length = 707

 Score =  120 bits (300), Expect = 2e-25
 Identities = 58/85 (68%), Positives = 70/85 (82%)
 Frame = +1

Query: 1   YEYCVRVIRWLEREGHMEKDFRVKFLTWFSLKSTIRDRRVVSAFVDTLIDDPSSLADQLV 180
           YEYCV+VIRWLE  GH+EKDFR+KFLTWFSL+ST ++RRVV  F+ TL DDPSSLA QL+
Sbjct: 626 YEYCVKVIRWLECSGHIEKDFRMKFLTWFSLRSTEQERRVVITFIRTLADDPSSLAGQLL 685

Query: 181 DTFLDEIRKEKKVIPRFGFCTQLWH 255
           D+F +EI   KK  PR GFC++LWH
Sbjct: 686 DSF-EEIVSSKK--PRTGFCSKLWH 707


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