BLASTX nr result
ID: Coptis24_contig00026281
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026281 (495 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299601.1| predicted protein [Populus trichocarpa] gi|2... 109 3e-22 dbj|BAJ53238.1| JHL06P13.19 [Jatropha curcas] 108 3e-22 gb|ABM67700.1| polygalacturonase [Citrus sinensis] 108 3e-22 ref|XP_003597864.1| hypothetical protein MTR_2g103410 [Medicago ... 107 8e-22 ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80... 104 9e-21 >ref|XP_002299601.1| predicted protein [Populus trichocarpa] gi|222846859|gb|EEE84406.1| predicted protein [Populus trichocarpa] Length = 447 Score = 109 bits (272), Expect = 3e-22 Identities = 54/88 (61%), Positives = 67/88 (76%) Frame = -3 Query: 493 TSAVKVEDISFVNITGTSATEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCWNVK 314 TSAVKVE+ISF I GTSATEEAI+FACSD PC+ +Y+E++QL S GG T SFCW Sbjct: 356 TSAVKVENISFRRIKGTSATEEAIKFACSDDLPCKGLYLEDVQLLSLTGGTTRSFCWQAY 415 Query: 313 GSSWGVVYPPSCLSCSKSFIELKTLPSN 230 GSS G+V+P C SCS+ FI+ K +PS+ Sbjct: 416 GSSRGLVHPSPCFSCSEGFIKEK-VPSH 442 >dbj|BAJ53238.1| JHL06P13.19 [Jatropha curcas] Length = 443 Score = 108 bits (271), Expect = 3e-22 Identities = 54/85 (63%), Positives = 63/85 (74%) Frame = -3 Query: 493 TSAVKVEDISFVNITGTSATEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCWNVK 314 TSAVKV +ISFV+I GTSATE AI+FACSD PCE +Y+E+IQL S+ G + SFCW Sbjct: 352 TSAVKVANISFVHIKGTSATENAIKFACSDYSPCEGLYLEDIQLVSHTGDISKSFCWEAY 411 Query: 313 GSSWGVVYPPSCLSCSKSFIELKTL 239 GSS VYPP C S S+SFIE K L Sbjct: 412 GSSLDPVYPPPCFSSSESFIEQKVL 436 >gb|ABM67700.1| polygalacturonase [Citrus sinensis] Length = 445 Score = 108 bits (271), Expect = 3e-22 Identities = 52/88 (59%), Positives = 66/88 (75%) Frame = -3 Query: 493 TSAVKVEDISFVNITGTSATEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCWNVK 314 TSAVKVE+I+F++I GTSATEEAI+FACSD PCE +++E++QL S+ GG SFCW Sbjct: 353 TSAVKVENITFIHIKGTSATEEAIKFACSDDSPCEGLFLEDVQLVSHSGGIAKSFCWEAY 412 Query: 313 GSSWGVVYPPSCLSCSKSFIELKTLPSN 230 GSS G V PP C +CS+ I+ K PSN Sbjct: 413 GSSVGQVEPPPCFACSEGLIQQKA-PSN 439 >ref|XP_003597864.1| hypothetical protein MTR_2g103410 [Medicago truncatula] gi|87162606|gb|ABD28401.1| Glycoside hydrolase, family 28 [Medicago truncatula] gi|355486912|gb|AES68115.1| hypothetical protein MTR_2g103410 [Medicago truncatula] Length = 451 Score = 107 bits (268), Expect = 8e-22 Identities = 51/85 (60%), Positives = 59/85 (69%) Frame = -3 Query: 493 TSAVKVEDISFVNITGTSATEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCWNVK 314 TSAV+V +ISF+NI GTSATEE I+FACSD PCE +Y+ENI L SY GG T S+CW Sbjct: 357 TSAVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENIFLRSYFGGNTRSYCWQAH 416 Query: 313 GSSWGVVYPPSCLSCSKSFIELKTL 239 GS+ G VYPP C S S I L Sbjct: 417 GSAQGYVYPPVCFSTSSDLIRQNVL 441 >ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max] Length = 443 Score = 104 bits (259), Expect = 9e-21 Identities = 47/76 (61%), Positives = 62/76 (81%) Frame = -3 Query: 493 TSAVKVEDISFVNITGTSATEEAIRFACSDTYPCEEIYVENIQLSSYLGGYTTSFCWNVK 314 TSAV+VE+ISF++I GTSATEEAI+F+CSD +PCE +Y+ENI L+S GG T+SFCW Sbjct: 349 TSAVRVENISFIDIQGTSATEEAIKFSCSDAFPCEGLYLENIFLASCFGGNTSSFCWQAH 408 Query: 313 GSSWGVVYPPSCLSCS 266 GS+ G ++P +CLS S Sbjct: 409 GSARGFLHPSTCLSSS 424