BLASTX nr result
ID: Coptis24_contig00026280
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026280 (577 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago ... 68 9e-16 emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera] 60 4e-14 ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago ... 58 3e-13 gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 79 5e-13 gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 79 5e-13 >ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago truncatula] gi|355479784|gb|AES60987.1| hypothetical protein MTR_1g073220 [Medicago truncatula] Length = 361 Score = 67.8 bits (164), Expect(2) = 9e-16 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 1/132 (0%) Frame = +2 Query: 173 FTSTTFWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQS 352 F W+ L +P C T+ +G+K+ S E+ E+ D ++I+V + + Sbjct: 167 FRHAPIWVQLRGLPTQCRTKQMGIKIGSSIGTVLASELYEYP-DKKLIIKIKVNLAVSTP 225 Query: 353 LRRGVTL-LIHGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQESGGHPADPIGRHPYGP 529 ++ G+ + W+ +RYE LP FC+ CG +GH +C+ A+ ++ GP Sbjct: 226 IKAGIYIGSAKDGAHWIDFRYENLPQFCFACGLIGHTEANCKLHDTRTNAESRNKNVLGP 285 Query: 530 RLRYEGPIGKRV 565 LRY G+R+ Sbjct: 286 WLRY-NHFGRRI 296 Score = 40.8 bits (94), Expect(2) = 9e-16 Identities = 15/62 (24%), Positives = 30/62 (48%) Frame = +1 Query: 1 LWGCASSLKISKVSDQIFQFKFPDQQTLQRTLNTGPWSFGNNLLVLIPWTHGSIGITVYF 180 +W ++ + D++F F +Q+ +R + PW F N+ L++ PW ++ F Sbjct: 108 IWCNPKGFRVEHIGDKLFHFFMDEQEDTKRIIRGNPWFFRNSWLIVHPWRRDIDARSLEF 167 Query: 181 NH 186 H Sbjct: 168 RH 169 >emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera] Length = 652 Score = 60.5 bits (145), Expect(2) = 4e-14 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%) Frame = +2 Query: 188 FWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGW--FLRIRVTVDLLQSLRR 361 FW+ + +IP+ ++ VG ++ K+ +I + G W F+RIRV +D+ Q L+R Sbjct: 72 FWIQVYDIPVGSMSLNVGKQLGNFIGKFVDYDINNNA--GLWRNFMRIRVLLDVRQPLKR 129 Query: 362 GVTLLI-HGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQ 478 + G V ++YERL +FCY CG LGH K C + Sbjct: 130 WKKIRKPQGEWSLVHFKYERLSTFCYLCGMLGHSEKFCDK 169 Score = 42.7 bits (99), Expect(2) = 4e-14 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = +1 Query: 1 LWGCASSLKISKVSDQIFQFKFPDQQTLQRTLNTGPWSFGNNLLVLIPWTHGSIGITVYF 180 +W + I +++ Q+F F+F L+R L GPW+F N+LL+L G+I + Sbjct: 8 VWRPGKGICIKEINKQLFLFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPL 67 Query: 181 NHFL 192 H L Sbjct: 68 FHVL 71 >ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago truncatula] gi|355478601|gb|AES59804.1| hypothetical protein MTR_1g026010 [Medicago truncatula] Length = 352 Score = 58.2 bits (139), Expect(2) = 3e-13 Identities = 30/100 (30%), Positives = 52/100 (52%) Frame = +2 Query: 188 FWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQSLRRGV 367 FW+ + ++PL + K+ K+ +++ R++ G +RI+V +DL L+RG Sbjct: 120 FWVRIYDLPLKLRYDLMAKKIGDLVGKFLEVDPRDNNRMGK-SIRIKVAIDLRNPLKRGT 178 Query: 368 TLLIHGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQESG 487 L P+FCYKCG +GH +K C++E+G Sbjct: 179 VL----------------PNFCYKCGRIGHQMKECEEETG 202 Score = 42.0 bits (97), Expect(2) = 3e-13 Identities = 16/45 (35%), Positives = 28/45 (62%) Frame = +1 Query: 4 WGCASSLKISKVSDQIFQFKFPDQQTLQRTLNTGPWSFGNNLLVL 138 W ++++I ++ +F FKF ++ + L +GPWSF NLL+L Sbjct: 57 WRLKNTVEIQDLNKNLFLFKFSSRRDAENILQSGPWSFDRNLLIL 101 >gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1621 Score = 79.0 bits (193), Expect = 5e-13 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%) Frame = +2 Query: 170 LFTSTTFWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQ 349 +F W+ +PL +T+ G+ + + ++ +++ E G G FLRI++ +D+ + Sbjct: 17 IFAFVPIWVRAMKLPLGLMTKETGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRK 76 Query: 350 SLRRGVTLLIHG--RDQWVPYRYERLPSFCYKCGHLGHILKHCQQE 481 L RGVTL + R W P YE LP FCY CG +GH K C+++ Sbjct: 77 PLMRGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTEKLCEKK 122 >gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group] Length = 1509 Score = 79.0 bits (193), Expect = 5e-13 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%) Frame = +2 Query: 170 LFTSTTFWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQ 349 +F W+ +PL +T+ G+ + + ++ +++ E G G FLRI++ +D+ + Sbjct: 86 IFAFVPIWVRAMKLPLGLMTKETGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRK 145 Query: 350 SLRRGVTLLIHG--RDQWVPYRYERLPSFCYKCGHLGHILKHCQQE 481 L RGVTL + R W P YE LP FCY CG +GH K C+++ Sbjct: 146 PLMRGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTEKLCEKK 191