BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026280
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago ...    68   9e-16
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    60   4e-14
ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago ...    58   3e-13
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    79   5e-13
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    79   5e-13

>ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago truncatula]
           gi|355479784|gb|AES60987.1| hypothetical protein
           MTR_1g073220 [Medicago truncatula]
          Length = 361

 Score = 67.8 bits (164), Expect(2) = 9e-16
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
 Frame = +2

Query: 173 FTSTTFWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQS 352
           F     W+ L  +P  C T+ +G+K+  S       E+ E+  D    ++I+V + +   
Sbjct: 167 FRHAPIWVQLRGLPTQCRTKQMGIKIGSSIGTVLASELYEYP-DKKLIIKIKVNLAVSTP 225

Query: 353 LRRGVTL-LIHGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQESGGHPADPIGRHPYGP 529
           ++ G+ +        W+ +RYE LP FC+ CG +GH   +C+       A+   ++  GP
Sbjct: 226 IKAGIYIGSAKDGAHWIDFRYENLPQFCFACGLIGHTEANCKLHDTRTNAESRNKNVLGP 285

Query: 530 RLRYEGPIGKRV 565
            LRY    G+R+
Sbjct: 286 WLRY-NHFGRRI 296



 Score = 40.8 bits (94), Expect(2) = 9e-16
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +1

Query: 1   LWGCASSLKISKVSDQIFQFKFPDQQTLQRTLNTGPWSFGNNLLVLIPWTHGSIGITVYF 180
           +W      ++  + D++F F   +Q+  +R +   PW F N+ L++ PW       ++ F
Sbjct: 108 IWCNPKGFRVEHIGDKLFHFFMDEQEDTKRIIRGNPWFFRNSWLIVHPWRRDIDARSLEF 167

Query: 181 NH 186
            H
Sbjct: 168 RH 169


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 60.5 bits (145), Expect(2) = 4e-14
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
 Frame = +2

Query: 188 FWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGW--FLRIRVTVDLLQSLRR 361
           FW+ + +IP+  ++  VG ++     K+   +I  +   G W  F+RIRV +D+ Q L+R
Sbjct: 72  FWIQVYDIPVGSMSLNVGKQLGNFIGKFVDYDINNNA--GLWRNFMRIRVLLDVRQPLKR 129

Query: 362 GVTLLI-HGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQ 478
              +    G    V ++YERL +FCY CG LGH  K C +
Sbjct: 130 WKKIRKPQGEWSLVHFKYERLSTFCYLCGMLGHSEKFCDK 169



 Score = 42.7 bits (99), Expect(2) = 4e-14
 Identities = 21/64 (32%), Positives = 34/64 (53%)
 Frame = +1

Query: 1   LWGCASSLKISKVSDQIFQFKFPDQQTLQRTLNTGPWSFGNNLLVLIPWTHGSIGITVYF 180
           +W     + I +++ Q+F F+F     L+R L  GPW+F N+LL+L     G+I   +  
Sbjct: 8   VWRPGKGICIKEINKQLFLFQFFHIVDLKRVLEGGPWTFDNHLLILHHLKQGAIPTAIPL 67

Query: 181 NHFL 192
            H L
Sbjct: 68  FHVL 71


>ref|XP_003589553.1| hypothetical protein MTR_1g026010 [Medicago truncatula]
           gi|355478601|gb|AES59804.1| hypothetical protein
           MTR_1g026010 [Medicago truncatula]
          Length = 352

 Score = 58.2 bits (139), Expect(2) = 3e-13
 Identities = 30/100 (30%), Positives = 52/100 (52%)
 Frame = +2

Query: 188 FWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQSLRRGV 367
           FW+ + ++PL      +  K+     K+ +++ R++   G   +RI+V +DL   L+RG 
Sbjct: 120 FWVRIYDLPLKLRYDLMAKKIGDLVGKFLEVDPRDNNRMGK-SIRIKVAIDLRNPLKRGT 178

Query: 368 TLLIHGRDQWVPYRYERLPSFCYKCGHLGHILKHCQQESG 487
            L                P+FCYKCG +GH +K C++E+G
Sbjct: 179 VL----------------PNFCYKCGRIGHQMKECEEETG 202



 Score = 42.0 bits (97), Expect(2) = 3e-13
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = +1

Query: 4   WGCASSLKISKVSDQIFQFKFPDQQTLQRTLNTGPWSFGNNLLVL 138
           W   ++++I  ++  +F FKF  ++  +  L +GPWSF  NLL+L
Sbjct: 57  WRLKNTVEIQDLNKNLFLFKFSSRRDAENILQSGPWSFDRNLLIL 101


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 170 LFTSTTFWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQ 349
           +F     W+    +PL  +T+  G+ + +   ++  +++ E G   G FLRI++ +D+ +
Sbjct: 17  IFAFVPIWVRAMKLPLGLMTKETGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRK 76

Query: 350 SLRRGVTLLIHG--RDQWVPYRYERLPSFCYKCGHLGHILKHCQQE 481
            L RGVTL +    R  W P  YE LP FCY CG +GH  K C+++
Sbjct: 77  PLMRGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTEKLCEKK 122


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 170 LFTSTTFWLHLENIPLDCITRAVGLKVAKSFPKYEKIEIREHGFDGGWFLRIRVTVDLLQ 349
           +F     W+    +PL  +T+  G+ + +   ++  +++ E G   G FLRI++ +D+ +
Sbjct: 86  IFAFVPIWVRAMKLPLGLMTKETGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRK 145

Query: 350 SLRRGVTLLIHG--RDQWVPYRYERLPSFCYKCGHLGHILKHCQQE 481
            L RGVTL +    R  W P  YE LP FCY CG +GH  K C+++
Sbjct: 146 PLMRGVTLFVGADERPLWCPLVYEFLPDFCYICGIVGHTEKLCEKK 191